prot_H-akashiwo_Contig1135.4.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-akashiwo_Contig1135.4.1
Unique Name	prot_H-akashiwo_Contig1135.4.1
Type	polypeptide
Organism	Heterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length	108

Homology

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BLAST of mRNA_H-akashiwo_Contig1135.4.1 vs. uniprot
Match: A0A7S3Y4V9_HETAK (Methionine--tRNA ligase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y4V9_HETAK)

HSP 1 Score: 241 bits (614), Expect = 1.080e-75
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0

Query:    1 MYVWFDALTNYLSGVRGLDPSAGTAAFWPASCHIIGKDIVWFHTVIWPCMLMSANVPLPTTVYSHGFINDKEGKKMSKSLGNVVDPHDELDKYPSDTFRWYLCREAP 107
            MYVWFDALTNYLSGVRGLDPSAGTAAFWPASCHIIGKDIVWFHTVIWPCMLMSANVPLPTTVYSHGFINDKEGKKMSKSLGNVVDPHDELDKYPSDTFRWYLCREAP
Sbjct:    5 MYVWFDALTNYLSGVRGLDPSAGTAAFWPASCHIIGKDIVWFHTVIWPCMLMSANVPLPTTVYSHGFINDKEGKKMSKSLGNVVDPHDELDKYPSDTFRWYLCREAP 111

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BLAST of mRNA_H-akashiwo_Contig1135.4.1 vs. uniprot
Match: A0A7S2KGA4_9STRA (Methionine--tRNA ligase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KGA4_9STRA)

HSP 1 Score: 187 bits (475), Expect = 2.180e-53
Identity = 83/111 (74.77%), Postives = 92/111 (82.88%), Query Frame = 0

Query:    1 MYVWFDALTNYLSGVRGLDPSAGTAA----FWPASCHIIGKDIVWFHTVIWPCMLMSANVPLPTTVYSHGFINDKEGKKMSKSLGNVVDPHDELDKYPSDTFRWYLCREAP 107
            MYVWFDAL+NYL+GV G+    GTA      WPA  HIIGKDI+WFHTVIWPC+LMSA +PLP TV++HGF+ND EGKKMSKSLGNVVDPHD LD YP DTFRWYLCREAP
Sbjct:  284 MYVWFDALSNYLTGVDGMGTEDGTAPDLAKSWPADVHIIGKDILWFHTVIWPCILMSAGIPLPKTVFAHGFVNDFEGKKMSKSLGNVVDPHDMLDLYPVDTFRWYLCREAP 394

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BLAST of mRNA_H-akashiwo_Contig1135.4.1 vs. uniprot
Match: A0A7J6SIB5_PEROL (Methionyl-tRNA synthetase (Fragment) n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6SIB5_PEROL)

HSP 1 Score: 175 bits (444), Expect = 5.850e-53
Identity = 74/107 (69.16%), Postives = 86/107 (80.37%), Query Frame = 0

Query:    1 MYVWFDALTNYLSGVRGLDPSAGTAAFWPASCHIIGKDIVWFHTVIWPCMLMSANVPLPTTVYSHGFINDKEGKKMSKSLGNVVDPHDELDKYPSDTFRWYLCREAP 107
            MYVWFDALTNY+S V GLD     A +WPA+ HIIGKDI+WFH VIWPCML+SA +PLP +V  HGFI D EGKKMSKS+GNVVDPHD LD++P DT RWY+  +AP
Sbjct:   35 MYVWFDALTNYVSAVNGLDAGNDKAYYWPANAHIIGKDIIWFHCVIWPCMLLSAGIPLPESVAVHGFIQDSEGKKMSKSIGNVVDPHDVLDEFPVDTVRWYMLSDAP 141

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BLAST of mRNA_H-akashiwo_Contig1135.4.1 vs. uniprot
Match: A0A7S1D9R7_CYCTE (Methionine--tRNA ligase n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D9R7_CYCTE)

HSP 1 Score: 184 bits (466), Expect = 8.910e-53
Identity = 80/112 (71.43%), Postives = 92/112 (82.14%), Query Frame = 0

Query:    1 MYVWFDALTNYLSGVRGLDPSA-----GTAAFWPASCHIIGKDIVWFHTVIWPCMLMSANVPLPTTVYSHGFINDKEGKKMSKSLGNVVDPHDELDKYPSDTFRWYLCREAP 107
            MYVW DAL+NYL+GV GL         G   FWPA+ H+IGKDI+WFHTVIWPC+LMSA++ LP TV++HGF+NDKEGKKMSKSLGNVVDPHD LDKY  DTFRWYLC+EAP
Sbjct:  147 MYVWVDALSNYLTGVNGLGARTDKVPVGLEDFWPANVHVIGKDILWFHTVIWPCLLMSADIELPLTVFAHGFVNDKEGKKMSKSLGNVVDPHDMLDKYAVDTFRWYLCKEAP 258

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BLAST of mRNA_H-akashiwo_Contig1135.4.1 vs. uniprot
Match: A0A1Z5JUD3_FISSO (Methionine--tRNA ligase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JUD3_FISSO)

HSP 1 Score: 185 bits (469), Expect = 1.140e-52
Identity = 81/111 (72.97%), Postives = 95/111 (85.59%), Query Frame = 0

Query:    1 MYVWFDALTNYLSGVRGL--DPSAGT--AAFWPASCHIIGKDIVWFHTVIWPCMLMSANVPLPTTVYSHGFINDKEGKKMSKSLGNVVDPHDELDKYPSDTFRWYLCREAP 107
            MYVW DAL+NYL+GV  L  DP A    A+FWPA  HIIGKDI+WFHTVIWPC+LMSA +PLP TV++HGF+NDK+GKKMSKSLGNVVDPHD LD++ +DTFRWYLC+EAP
Sbjct:  263 MYVWVDALSNYLTGVNALQTDPDASPELASFWPAQVHIIGKDILWFHTVIWPCLLMSAGLPLPQTVFAHGFVNDKDGKKMSKSLGNVVDPHDMLDQFTTDTFRWYLCKEAP 373

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BLAST of mRNA_H-akashiwo_Contig1135.4.1 vs. uniprot
Match: A0A7S4J5C0_9STRA (Methionine--tRNA ligase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J5C0_9STRA)

HSP 1 Score: 185 bits (470), Expect = 2.090e-52
Identity = 83/114 (72.81%), Postives = 94/114 (82.46%), Query Frame = 0

Query:    1 MYVWFDALTNYLSGVRGL---DPSAGTAA----FWPASCHIIGKDIVWFHTVIWPCMLMSANVPLPTTVYSHGFINDKEGKKMSKSLGNVVDPHDELDKYPSDTFRWYLCREAP 107
            MYVWFDAL+NYL+GV G+   DP  G  A    FWPA  HIIGKDI+WFHTVIWP +LMSA +PLP  V++HGF+NDKEGKKMSKSLGNVVDPHD LD+YP DTFRWYLC+EAP
Sbjct:  405 MYVWFDALSNYLTGVDGMGANDPEGGADAELVKFWPADVHIIGKDILWFHTVIWPTILMSAGLPLPKKVFAHGFVNDKEGKKMSKSLGNVVDPHDMLDQYPVDTFRWYLCKEAP 518

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BLAST of mRNA_H-akashiwo_Contig1135.4.1 vs. uniprot
Match: A0A7S4RCK1_9STRA (Methionine--tRNA ligase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RCK1_9STRA)

HSP 1 Score: 182 bits (462), Expect = 2.270e-52
Identity = 79/114 (69.30%), Postives = 94/114 (82.46%), Query Frame = 0

Query:    1 MYVWFDALTNYLSGVRGL---DPSAGT----AAFWPASCHIIGKDIVWFHTVIWPCMLMSANVPLPTTVYSHGFINDKEGKKMSKSLGNVVDPHDELDKYPSDTFRWYLCREAP 107
            MYVWFDAL+NYL+G+  L   DP  G     A FWPA+ HIIGKDI+WFHTVIWPC+L SA +  PTTV++HGF+NDKEGKKMSKS+GNV+DPHD L++YP DTFRWYLC+EAP
Sbjct:  184 MYVWFDALSNYLTGIDALGVRDPETGPNPELAKFWPANVHIIGKDILWFHTVIWPCILFSAGITPPTTVFAHGFVNDKEGKKMSKSIGNVIDPHDMLNQYPVDTFRWYLCKEAP 297

[Close]

BLAST of mRNA_H-akashiwo_Contig1135.4.1 vs. uniprot
Match: A0A1Q9E7Q4_SYMMI (Methionine--tRNA ligase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9E7Q4_SYMMI)

HSP 1 Score: 176 bits (446), Expect = 4.190e-52
Identity = 75/106 (70.75%), Postives = 85/106 (80.19%), Query Frame = 0

Query:    1 MYVWFDALTNYLSGVRGLDPSAGTAAFWPASCHIIGKDIVWFHTVIWPCMLMSANVPLPTTVYSHGFINDKEGKKMSKSLGNVVDPHDELDKYPSDTFRWYLCREA 106
            MYVWFDAL NYLSG+ G+DP    + FWPA+ HI+GKDI WFHTVIWP MLMSA +PLP +V  HGFI   +G+KMSKSLGNVVDPHD LDK+P DT RWY CREA
Sbjct:   62 MYVWFDALINYLSGIDGIDPKKPLSRFWPANMHIVGKDIHWFHTVIWPAMLMSAGIPLPKSVVVHGFIAGADGRKMSKSLGNVVDPHDMLDKFPCDTLRWYFCREA 167

[Close]

BLAST of mRNA_H-akashiwo_Contig1135.4.1 vs. uniprot
Match: A0A7S2YTJ8_9STRA (Methionine--tRNA ligase (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YTJ8_9STRA)

HSP 1 Score: 182 bits (462), Expect = 5.100e-52
Identity = 81/111 (72.97%), Postives = 92/111 (82.88%), Query Frame = 0

Query:    1 MYVWFDALTNYLSGVRGL--DPSA--GTAAFWPASCHIIGKDIVWFHTVIWPCMLMSANVPLPTTVYSHGFINDKEGKKMSKSLGNVVDPHDELDKYPSDTFRWYLCREAP 107
            MYVW DAL+NYL+GV GL  +P A  G   FWPA  H+IGKDI+WFHTVIWPC+LMSA +PL  TVY+HGF+NDKEGKKMSKSLGNVVDPHD LD +  DTFRWYLC+EAP
Sbjct:  326 MYVWMDALSNYLTGVNGLGANPEAVSGLEKFWPADNHVIGKDILWFHTVIWPCLLMSAKIPLAKTVYAHGFVNDKEGKKMSKSLGNVVDPHDMLDLFQVDTFRWYLCKEAP 436

[Close]

BLAST of mRNA_H-akashiwo_Contig1135.4.1 vs. uniprot
Match: A0A7S4RC46_9STRA (Methionine--tRNA ligase n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RC46_9STRA)

HSP 1 Score: 182 bits (462), Expect = 5.700e-52
Identity = 79/114 (69.30%), Postives = 94/114 (82.46%), Query Frame = 0

Query:    1 MYVWFDALTNYLSGVRGL---DPSAGT----AAFWPASCHIIGKDIVWFHTVIWPCMLMSANVPLPTTVYSHGFINDKEGKKMSKSLGNVVDPHDELDKYPSDTFRWYLCREAP 107
            MYVWFDAL+NYL+G+  L   DP  G     A FWPA+ HIIGKDI+WFHTVIWPC+L SA +  PTTV++HGF+NDKEGKKMSKS+GNV+DPHD L++YP DTFRWYLC+EAP
Sbjct:  184 MYVWFDALSNYLTGIDALGVRDPETGPNPELAKFWPANVHIIGKDILWFHTVIWPCILFSAGITPPTTVFAHGFVNDKEGKKMSKSIGNVIDPHDMLNQYPVDTFRWYLCKEAP 297

The following BLAST results are available for this feature:

BLAST of mRNA_H-akashiwo_Contig1135.4.1 vs. uniprot

BLAST of mRNA_H-akashiwo_Contig1135.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A7S3Y4V9_HETAK	1.080e-75	100.00	Methionine--tRNA ligase n=1 Tax=Heterosigma akashi...	[more]
A0A7S2KGA4_9STRA	2.180e-53	74.77	Methionine--tRNA ligase n=1 Tax=Leptocylindrus dan...	[more]
A0A7J6SIB5_PEROL	5.850e-53	69.16	Methionyl-tRNA synthetase (Fragment) n=1 Tax=Perki...	[more]
A0A7S1D9R7_CYCTE	8.910e-53	71.43	Methionine--tRNA ligase n=1 Tax=Cyclophora tenuis ...	[more]
A0A1Z5JUD3_FISSO	1.140e-52	72.97	Methionine--tRNA ligase n=2 Tax=Fistulifera solari...	[more]
A0A7S4J5C0_9STRA	2.090e-52	72.81	Methionine--tRNA ligase n=1 Tax=Odontella aurita T...	[more]
A0A7S4RCK1_9STRA	2.270e-52	69.30	Methionine--tRNA ligase n=1 Tax=Ditylum brightwell...	[more]
A0A1Q9E7Q4_SYMMI	4.190e-52	70.75	Methionine--tRNA ligase n=1 Tax=Symbiodinium micro...	[more]
A0A7S2YTJ8_9STRA	5.100e-52	72.97	Methionine--tRNA ligase (Fragment) n=1 Tax=Amphipr...	[more]
A0A7S4RC46_9STRA	5.700e-52	69.30	Methionine--tRNA ligase n=3 Tax=Ditylum brightwell...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033911	Methioninyl-tRNA synthetase core domain	PRINTS	PR01041	TRNASYNTHMET	coord: 1..12 score: 64.51 coord: 33..48 score: 59.26
IPR015413	Methionyl/Leucyl tRNA synthetase	PFAM	PF09334	tRNA-synt_1g	coord: 1..107 e-value: 1.4E-31 score: 109.6
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	3.40.50.620	HUPs	coord: 1..107 e-value: 6.4E-45 score: 155.8
None	No IPR available	PANTHER	PTHR43326:SF2	AMINOACYL-TRNA SYNTHETASE, CLASS 1A,ANTICODON-BINDING	coord: 1..106
None	No IPR available	SUPERFAMILY	52374	Nucleotidylyl transferase	coord: 1..105
IPR023457	Methionine-tRNA synthetase, type 2	PANTHER	PTHR43326	METHIONYL-TRNA SYNTHETASE	coord: 1..106

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-akashiwo_Contig1135	contig	H-akashiwo_Contig1135:135921..142076 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Heterosigma akashiwo CCMP452 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-akashiwo_Contig1135.4.1	mRNA_H-akashiwo_Contig1135.4.1	Heterosigma akashiwo CCMP452	mRNA	H-akashiwo_Contig1135 135895..142104 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-akashiwo_Contig1135.4.1 ID=prot_H-akashiwo_Contig1135.4.1|Name=mRNA_H-akashiwo_Contig1135.4.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=108bp
MYVWFDALTNYLSGVRGLDPSAGTAAFWPASCHIIGKDIVWFHTVIWPCM
LMSANVPLPTTVYSHGFINDKEGKKMSKSLGNVVDPHDELDKYPSDTFRW
YLCREAP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR033911	MetRS_core
IPR015413	Methionyl/Leucyl_tRNA_Synth
IPR014729	Rossmann-like_a/b/a_fold
IPR023457	Met-tRNA_synth_2