prot_H-akashiwo_Contig1133.5.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig1133.5.1
Unique Nameprot_H-akashiwo_Contig1133.5.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length64
Homology
BLAST of mRNA_H-akashiwo_Contig1133.5.1 vs. uniprot
Match: A0A7S3Y8F0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8F0_HETAK)

HSP 1 Score: 142 bits (359), Expect = 1.120e-38
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0
Query:    1 QFRRFLAEEGTVAQYTSPYTPEHNGVAERTNRAAWDMCRTVMLQSGADTRWWGVCLLNYCLPTL 64
            QFRRFLAEEGTVAQYTSPYTPEHNGVAERTNRAAWDMCRTVMLQSGADTRWWGVCLLNYCLPTL
Sbjct:   94 QFRRFLAEEGTVAQYTSPYTPEHNGVAERTNRAAWDMCRTVMLQSGADTRWWGVCLLNYCLPTL 157          
BLAST of mRNA_H-akashiwo_Contig1133.5.1 vs. uniprot
Match: A0A7S3XNA8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNA8_HETAK)

HSP 1 Score: 126 bits (317), Expect = 1.310e-34
Identity = 56/64 (87.50%), Postives = 60/64 (93.75%), Query Frame = 0
Query:    1 QFRRFLAEEGTVAQYTSPYTPEHNGVAERTNRAAWDMCRTVMLQSGADTRWWGVCLLNYCLPTL 64
            QF+ FLA EGTVAQYTSPYTPEHNGVAER NRAA++MCRT MLQSGAD+RWWGVCLLNYCLPTL
Sbjct:   86 QFKDFLAREGTVAQYTSPYTPEHNGVAERANRAAFEMCRTAMLQSGADSRWWGVCLLNYCLPTL 149          
BLAST of mRNA_H-akashiwo_Contig1133.5.1 vs. uniprot
Match: A0A7S4DDH6_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DDH6_HETAK)

HSP 1 Score: 108 bits (271), Expect = 3.490e-26
Identity = 47/64 (73.44%), Postives = 52/64 (81.25%), Query Frame = 0
Query:    1 QFRRFLAEEGTVAQYTSPYTPEHNGVAERTNRAAWDMCRTVMLQSGADTRWWGVCLLNYCLPTL 64
            +F  FLA EGT   +TS YTPEHNGVAERTNR  WDMCRTVMLQ+GAD RWWG CL++Y LPTL
Sbjct:  671 EFMAFLAAEGTRPNFTSAYTPEHNGVAERTNRVVWDMCRTVMLQAGADPRWWGTCLIHYVLPTL 734          
BLAST of mRNA_H-akashiwo_Contig1133.5.1 vs. uniprot
Match: A0A182G3I8_AEDAL (Integrase catalytic domain-containing protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182G3I8_AEDAL)

HSP 1 Score: 64.7 bits (156), Expect = 7.710e-11
Identity = 27/53 (50.94%), Postives = 38/53 (71.70%), Query Frame = 0
Query:    1 QFRRFLAEEGTVAQYTSPYTPEHNGVAERTNRAAWDMCRTVMLQSGADTRWWG 53
            +  RF A++G  AQYT+ YTP+ NGVAER NR+  +M  T++L +G D R+WG
Sbjct:  161 ELHRFFADQGIRAQYTTAYTPQQNGVAERKNRSLQEMATTMLLDAGLDKRYWG 213          
BLAST of mRNA_H-akashiwo_Contig1133.5.1 vs. uniprot
Match: A0A5E4MPX9_9HEMI (Integrase, catalytic core,Ribonuclease H-like domain n=1 Tax=Cinara cedri TaxID=506608 RepID=A0A5E4MPX9_9HEMI)

HSP 1 Score: 60.5 bits (145), Expect = 2.880e-9
Identity = 28/65 (43.08%), Postives = 39/65 (60.00%), Query Frame = 0
Query:    2 FRRFLAEEGTVAQYTSPYTPEHNGVAERTNRAAWDMCRTVMLQSGADTRWWG--VCLLNYCLPTL 64
            F+ F A++G V  YT+PYTPE NG+AERTNR   +  R+++ QSG     W     ++ Y L  L
Sbjct:   61 FKNFCAQKGIVVNYTAPYTPEQNGLAERTNRTIIESTRSLLFQSGLSKEMWSEAALMVTYLLNRL 125          
BLAST of mRNA_H-akashiwo_Contig1133.5.1 vs. uniprot
Match: A0A182HAC3_AEDAL (Integrase catalytic domain-containing protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182HAC3_AEDAL)

HSP 1 Score: 60.8 bits (146), Expect = 2.930e-9
Identity = 25/58 (43.10%), Postives = 39/58 (67.24%), Query Frame = 0
Query:    1 QFRRFLAEEGTVAQYTSPYTPEHNGVAERTNRAAWDMCRTVMLQSGADTRWWGVCLLN 58
            + +RFL  EG V Q+++PY+P+ NGVAER NR   +M   ++L+ G D ++WG  +L 
Sbjct:   95 ELQRFLRSEGIVCQFSAPYSPQQNGVAERRNRYLKEMTMCLLLEGGLDEKYWGEAVLT 152          
BLAST of mRNA_H-akashiwo_Contig1133.5.1 vs. uniprot
Match: A0A2Z6PD07_TRISU (Uncharacterized protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6PD07_TRISU)

HSP 1 Score: 60.8 bits (146), Expect = 2.940e-9
Identity = 26/60 (43.33%), Postives = 41/60 (68.33%), Query Frame = 0
Query:    1 QFRRFLAEEGTVAQYTSPYTPEHNGVAERTNRAAWDMCRTVMLQSGADTRWWG--VCLLN 58
            +F  +  ++G + + T+PYTP+HNG+AER NR+  DM R+++ Q G   R+WG  V +LN
Sbjct:  541 EFENYCKDQGIIHEVTAPYTPQHNGLAERRNRSILDMARSMVKQKGLQHRFWGEAVYILN 600          
BLAST of mRNA_H-akashiwo_Contig1133.5.1 vs. uniprot
Match: A0A392MC19_9FABA (Retrovirus-related pol polyprotein from transposon tnt 1-94 (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392MC19_9FABA)

HSP 1 Score: 60.5 bits (145), Expect = 3.650e-9
Identity = 29/69 (42.03%), Postives = 41/69 (59.42%), Query Frame = 0
Query:    1 QFRRFLAEEGTVAQYTSPYTPEHNGVAERTNRAAWDMCRTVMLQSGADTRWWG------VCLLNYCLPT 63
            +F  F   EG + + T+PYTP+HNG+AER NR   DM R+++ Q     ++WG      V +LN C PT
Sbjct:   85 EFEAFCVNEGIIHEVTAPYTPQHNGLAERRNRTILDMARSMLKQKNMPPKFWGEAVSAAVYILNKC-PT 152          
BLAST of mRNA_H-akashiwo_Contig1133.5.1 vs. uniprot
Match: A0A2N5U631_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Puccinia coronata f. sp. avenae TaxID=200324 RepID=A0A2N5U631_9BASI)

HSP 1 Score: 60.1 bits (144), Expect = 5.480e-9
Identity = 28/64 (43.75%), Postives = 35/64 (54.69%), Query Frame = 0
Query:    6 LAEEGTVAQYTSPYTPEHNGVAERTNRAAWDMCRTVMLQSGADTRWWG-----VCLLNYCLPTL 64
            LA+EG       PYTP+HNGVAER NR   DM R ++L +     WWG       +   CLP+L
Sbjct:  723 LAKEGIQHNIAPPYTPQHNGVAERANRTIIDMTRCILLHAKMSAEWWGDAVVAAAMTTNCLPSL 786          
BLAST of mRNA_H-akashiwo_Contig1133.5.1 vs. uniprot
Match: A0A2Z6MLX9_TRISU (Integrase catalytic domain-containing protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6MLX9_TRISU)

HSP 1 Score: 60.1 bits (144), Expect = 5.480e-9
Identity = 23/53 (43.40%), Postives = 37/53 (69.81%), Query Frame = 0
Query:    1 QFRRFLAEEGTVAQYTSPYTPEHNGVAERTNRAAWDMCRTVMLQSGADTRWWG 53
            +F  +  ++G + + T+PYTP+HNG+AER NR+  DM R+++ Q G   R+WG
Sbjct:  398 EFENYCKDQGIIHEVTTPYTPQHNGLAERRNRSILDMARSMVKQKGLPHRFWG 450          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1133.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3Y8F0_HETAK1.120e-38100.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3XNA8_HETAK1.310e-3487.50Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S4DDH6_HETAK3.490e-2673.44Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A182G3I8_AEDAL7.710e-1150.94Integrase catalytic domain-containing protein n=1 ... [more]
A0A5E4MPX9_9HEMI2.880e-943.08Integrase, catalytic core,Ribonuclease H-like doma... [more]
A0A182HAC3_AEDAL2.930e-943.10Integrase catalytic domain-containing protein n=1 ... [more]
A0A2Z6PD07_TRISU2.940e-943.33Uncharacterized protein n=1 Tax=Trifolium subterra... [more]
A0A392MC19_9FABA3.650e-942.03Retrovirus-related pol polyprotein from transposon... [more]
A0A2N5U631_9BASI5.480e-943.75Integrase catalytic domain-containing protein n=1 ... [more]
A0A2Z6MLX9_TRISU5.480e-943.40Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..63
e-value: 9.0E-11
score: 43.6
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 2..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1133contigH-akashiwo_Contig1133:296522..296713 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1133.5.1mRNA_H-akashiwo_Contig1133.5.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig1133 296522..296714 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig1133.5.1 ID=prot_H-akashiwo_Contig1133.5.1|Name=mRNA_H-akashiwo_Contig1133.5.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=64bp
QFRRFLAEEGTVAQYTSPYTPEHNGVAERTNRAAWDMCRTVMLQSGADTR
WWGVCLLNYCLPTL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR012337RNaseH-like_sf