mRNA_H-akashiwo_Contig1133.5.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1133.5.1 vs. uniprot
Match: A0A7S3Y8F0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8F0_HETAK) HSP 1 Score: 142 bits (359), Expect = 1.120e-38 Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 1
Query: 1 QFRRFLAEEGTVAQYTSPYTPEHNGVAERTNRAAWDMCRTVMLQSGADTRWWGVCLLNYCLPTL 192
QFRRFLAEEGTVAQYTSPYTPEHNGVAERTNRAAWDMCRTVMLQSGADTRWWGVCLLNYCLPTL
Sbjct: 94 QFRRFLAEEGTVAQYTSPYTPEHNGVAERTNRAAWDMCRTVMLQSGADTRWWGVCLLNYCLPTL 157
BLAST of mRNA_H-akashiwo_Contig1133.5.1 vs. uniprot
Match: A0A7S3XNA8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNA8_HETAK) HSP 1 Score: 126 bits (317), Expect = 1.310e-34 Identity = 56/64 (87.50%), Postives = 60/64 (93.75%), Query Frame = 1
Query: 1 QFRRFLAEEGTVAQYTSPYTPEHNGVAERTNRAAWDMCRTVMLQSGADTRWWGVCLLNYCLPTL 192
QF+ FLA EGTVAQYTSPYTPEHNGVAER NRAA++MCRT MLQSGAD+RWWGVCLLNYCLPTL
Sbjct: 86 QFKDFLAREGTVAQYTSPYTPEHNGVAERANRAAFEMCRTAMLQSGADSRWWGVCLLNYCLPTL 149
BLAST of mRNA_H-akashiwo_Contig1133.5.1 vs. uniprot
Match: A0A7S4DDH6_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DDH6_HETAK) HSP 1 Score: 108 bits (271), Expect = 3.490e-26 Identity = 47/64 (73.44%), Postives = 52/64 (81.25%), Query Frame = 1
Query: 1 QFRRFLAEEGTVAQYTSPYTPEHNGVAERTNRAAWDMCRTVMLQSGADTRWWGVCLLNYCLPTL 192
+F FLA EGT +TS YTPEHNGVAERTNR WDMCRTVMLQ+GAD RWWG CL++Y LPTL
Sbjct: 671 EFMAFLAAEGTRPNFTSAYTPEHNGVAERTNRVVWDMCRTVMLQAGADPRWWGTCLIHYVLPTL 734
BLAST of mRNA_H-akashiwo_Contig1133.5.1 vs. uniprot
Match: A0A182G3I8_AEDAL (Integrase catalytic domain-containing protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182G3I8_AEDAL) HSP 1 Score: 64.7 bits (156), Expect = 7.710e-11 Identity = 27/53 (50.94%), Postives = 38/53 (71.70%), Query Frame = 1
Query: 1 QFRRFLAEEGTVAQYTSPYTPEHNGVAERTNRAAWDMCRTVMLQSGADTRWWG 159
+ RF A++G AQYT+ YTP+ NGVAER NR+ +M T++L +G D R+WG
Sbjct: 161 ELHRFFADQGIRAQYTTAYTPQQNGVAERKNRSLQEMATTMLLDAGLDKRYWG 213
BLAST of mRNA_H-akashiwo_Contig1133.5.1 vs. uniprot
Match: A0A5E4MPX9_9HEMI (Integrase, catalytic core,Ribonuclease H-like domain n=1 Tax=Cinara cedri TaxID=506608 RepID=A0A5E4MPX9_9HEMI) HSP 1 Score: 60.5 bits (145), Expect = 2.880e-9 Identity = 28/65 (43.08%), Postives = 39/65 (60.00%), Query Frame = 1
Query: 4 FRRFLAEEGTVAQYTSPYTPEHNGVAERTNRAAWDMCRTVMLQSGADTRWWG--VCLLNYCLPTL 192
F+ F A++G V YT+PYTPE NG+AERTNR + R+++ QSG W ++ Y L L
Sbjct: 61 FKNFCAQKGIVVNYTAPYTPEQNGLAERTNRTIIESTRSLLFQSGLSKEMWSEAALMVTYLLNRL 125
BLAST of mRNA_H-akashiwo_Contig1133.5.1 vs. uniprot
Match: A0A182HAC3_AEDAL (Integrase catalytic domain-containing protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182HAC3_AEDAL) HSP 1 Score: 60.8 bits (146), Expect = 2.930e-9 Identity = 25/58 (43.10%), Postives = 39/58 (67.24%), Query Frame = 1
Query: 1 QFRRFLAEEGTVAQYTSPYTPEHNGVAERTNRAAWDMCRTVMLQSGADTRWWGVCLLN 174
+ +RFL EG V Q+++PY+P+ NGVAER NR +M ++L+ G D ++WG +L
Sbjct: 95 ELQRFLRSEGIVCQFSAPYSPQQNGVAERRNRYLKEMTMCLLLEGGLDEKYWGEAVLT 152
BLAST of mRNA_H-akashiwo_Contig1133.5.1 vs. uniprot
Match: A0A2Z6PD07_TRISU (Uncharacterized protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6PD07_TRISU) HSP 1 Score: 60.8 bits (146), Expect = 2.940e-9 Identity = 26/60 (43.33%), Postives = 41/60 (68.33%), Query Frame = 1
Query: 1 QFRRFLAEEGTVAQYTSPYTPEHNGVAERTNRAAWDMCRTVMLQSGADTRWWG--VCLLN 174
+F + ++G + + T+PYTP+HNG+AER NR+ DM R+++ Q G R+WG V +LN
Sbjct: 541 EFENYCKDQGIIHEVTAPYTPQHNGLAERRNRSILDMARSMVKQKGLQHRFWGEAVYILN 600
BLAST of mRNA_H-akashiwo_Contig1133.5.1 vs. uniprot
Match: A0A392MC19_9FABA (Retrovirus-related pol polyprotein from transposon tnt 1-94 (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392MC19_9FABA) HSP 1 Score: 60.5 bits (145), Expect = 3.650e-9 Identity = 29/69 (42.03%), Postives = 41/69 (59.42%), Query Frame = 1
Query: 1 QFRRFLAEEGTVAQYTSPYTPEHNGVAERTNRAAWDMCRTVMLQSGADTRWWG------VCLLNYCLPT 189
+F F EG + + T+PYTP+HNG+AER NR DM R+++ Q ++WG V +LN C PT
Sbjct: 85 EFEAFCVNEGIIHEVTAPYTPQHNGLAERRNRTILDMARSMLKQKNMPPKFWGEAVSAAVYILNKC-PT 152
BLAST of mRNA_H-akashiwo_Contig1133.5.1 vs. uniprot
Match: A0A2N5U631_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Puccinia coronata f. sp. avenae TaxID=200324 RepID=A0A2N5U631_9BASI) HSP 1 Score: 60.1 bits (144), Expect = 5.480e-9 Identity = 28/64 (43.75%), Postives = 35/64 (54.69%), Query Frame = 1
Query: 16 LAEEGTVAQYTSPYTPEHNGVAERTNRAAWDMCRTVMLQSGADTRWWG-----VCLLNYCLPTL 192
LA+EG PYTP+HNGVAER NR DM R ++L + WWG + CLP+L
Sbjct: 723 LAKEGIQHNIAPPYTPQHNGVAERANRTIIDMTRCILLHAKMSAEWWGDAVVAAAMTTNCLPSL 786
BLAST of mRNA_H-akashiwo_Contig1133.5.1 vs. uniprot
Match: A0A2Z6MLX9_TRISU (Integrase catalytic domain-containing protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6MLX9_TRISU) HSP 1 Score: 60.1 bits (144), Expect = 5.480e-9 Identity = 23/53 (43.40%), Postives = 37/53 (69.81%), Query Frame = 1
Query: 1 QFRRFLAEEGTVAQYTSPYTPEHNGVAERTNRAAWDMCRTVMLQSGADTRWWG 159
+F + ++G + + T+PYTP+HNG+AER NR+ DM R+++ Q G R+WG
Sbjct: 398 EFENYCKDQGIIHEVTTPYTPQHNGLAERRNRSILDMARSMVKQKGLPHRFWG 450 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1133.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1133.5.1 >prot_H-akashiwo_Contig1133.5.1 ID=prot_H-akashiwo_Contig1133.5.1|Name=mRNA_H-akashiwo_Contig1133.5.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=64bp QFRRFLAEEGTVAQYTSPYTPEHNGVAERTNRAAWDMCRTVMLQSGADTRback to top mRNA from alignment at H-akashiwo_Contig1133:296522..296714+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1133.5.1 ID=mRNA_H-akashiwo_Contig1133.5.1|Name=mRNA_H-akashiwo_Contig1133.5.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=193bp|location=Sequence derived from alignment at H-akashiwo_Contig1133:296522..296714+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1133:296522..296714+ >mRNA_H-akashiwo_Contig1133.5.1 ID=mRNA_H-akashiwo_Contig1133.5.1|Name=mRNA_H-akashiwo_Contig1133.5.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=192bp|location=Sequence derived from alignment at H-akashiwo_Contig1133:296522..296714+ (Heterosigma akashiwo CCMP452)back to top |