prot_H-akashiwo_Contig110.29.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig110.29.1
Unique Nameprot_H-akashiwo_Contig110.29.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length121
Homology
[Close]
BLAST of mRNA_H-akashiwo_Contig110.29.1 vs. uniprot
Match: A0A6V1P7M0_HETAK (Histone H2A n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P7M0_HETAK)

HSP 1 Score: 231 bits (589), Expect = 2.240e-76
Identity = 119/120 (99.17%), Postives = 120/120 (100.00%), Query Frame = 0 
Query:    1 MAGKAGRGKKSQTKSSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRIVPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIHTVLLPKKTKTA 120
            MAGKAGRGKKSQT+SSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRIVPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIHTVLLPKKTKTA
Sbjct:   27 MAGKAGRGKKSQTRSSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRIVPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIHTVLLPKKTKTA 146
[Close]
BLAST of mRNA_H-akashiwo_Contig110.29.1 vs. uniprot
Match: A0A7S3UYM8_HETAK (Histone H2A n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UYM8_HETAK)

HSP 1 Score: 212 bits (539), Expect = 1.540e-68
Identity = 108/116 (93.10%), Postives = 112/116 (96.55%), Query Frame = 0 
Query:    2 AGKAGRGKKSQTKSSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRIVPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIHTVLLPKKT 117
            A   GRGKKSQ+KSSKAGLQFPVGRIGRYLK GRYSARVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRI+PRHLQLAVRNDEELNKLLGGVTI+QGGVLPNIHTVLLPKK+
Sbjct:   34 AAAGGRGKKSQSKSSKAGLQFPVGRIGRYLKNGRYSARVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTISQGGVLPNIHTVLLPKKS 149
[Close]
BLAST of mRNA_H-akashiwo_Contig110.29.1 vs. uniprot
Match: A0A7S2V3S5_9STRA (Histone H2A n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3S5_9STRA)

HSP 1 Score: 198 bits (504), Expect = 7.890e-64
Identity = 98/110 (89.09%), Postives = 107/110 (97.27%), Query Frame = 0 
Query:    9 KKSQTKSSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRIVPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIHTVLLPKKTK 118
            KKS TKS+KAGLQFPVGRIGR+LK+GRY+ RVGAGAPVY+AAVLEYLCAEILELAGNAARDNKK+RI+PRHLQLA+RNDEELNKLLGGVTI+QGGVLPNIH VLLPKKTK
Sbjct:    7 KKSVTKSTKAGLQFPVGRIGRFLKKGRYAPRVGAGAPVYMAAVLEYLCAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGGVTISQGGVLPNIHAVLLPKKTK 116
[Close]
BLAST of mRNA_H-akashiwo_Contig110.29.1 vs. uniprot
Match: D7FWI9_ECTSI (Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7FWI9_ECTSI)

HSP 1 Score: 196 bits (497), Expect = 1.080e-62
Identity = 97/115 (84.35%), Postives = 108/115 (93.91%), Query Frame = 0 
Query:    3 GKAGRGKKSQTKSSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRIVPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIHTVLLPKKT 117
            GK GRGKKS T+S+KAGLQFPVGR+GR+LK+G+Y++RVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK RI+PRH+QLAVRNDEELNKLLG VTIA GGVLPNIH VLLPKKT
Sbjct:    5 GKGGRGKKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKT 119
[Close]
BLAST of mRNA_H-akashiwo_Contig110.29.1 vs. uniprot
Match: A0A7S2GRL8_9STRA (Histone H2A n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GRL8_9STRA)

HSP 1 Score: 196 bits (498), Expect = 1.120e-62
Identity = 98/114 (85.96%), Postives = 107/114 (93.86%), Query Frame = 0 
Query:    3 GKAGRGKKSQTKSSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRIVPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIHTVLLPKK 116
            GK GRGKKS T S+KAGLQFPVGRIGRYLKQG+++ R+GAGAPVYLAAVLEYLCAEILELAGNAARDNKK+RI PRH+ LAV+NDEELNKLLGGVTIA GGVLPNIH+VLLPKK
Sbjct:    5 GKGGRGKKSTTSSAKAGLQFPVGRIGRYLKQGKFATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIAPRHITLAVKNDEELNKLLGGVTIAGGGVLPNIHSVLLPKK 118
[Close]
BLAST of mRNA_H-akashiwo_Contig110.29.1 vs. uniprot
Match: A0A836CG77_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG77_9STRA)

HSP 1 Score: 195 bits (495), Expect = 2.740e-62
Identity = 102/121 (84.30%), Postives = 109/121 (90.08%), Query Frame = 0 
Query:    3 GKAGRG---KKSQTKSSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRIVPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIHTVLLPKKTKTA 120
            GK GRG   KKS +KSSKAGLQFPV R+GR+LK GRY+ RVGAGAPVYLAAVLEYLCAEILELAGNAARDNKK+RIVPRH+QLAVRNDEELNKLLG VTIA GGVLPNIH VLLPKKT +A
Sbjct:    5 GKGGRGAEAKKSTSKSSKAGLQFPVARLGRFLKVGRYAERVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHIQLAVRNDEELNKLLGNVTIASGGVLPNIHAVLLPKKTASA 125
[Close]
BLAST of mRNA_H-akashiwo_Contig110.29.1 vs. uniprot
Match: A0A7R9YCM0_9STRA (Histone H2A n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCM0_9STRA)

HSP 1 Score: 195 bits (496), Expect = 2.750e-62
Identity = 96/110 (87.27%), Postives = 105/110 (95.45%), Query Frame = 0 
Query:   10 KSQTKSSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRIVPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIHTVLLPKKTKT 119
            KS T+SSKAGLQFPVGR+GRYLKQGRY  R+G+GAPVYLAAVLEYLCAEILELAGNAARDNKK+RI+PRH+QLAVRNDEELNKLLG VTIAQGGVLPNIH VLLPKK+K+
Sbjct:   22 KSMTRSSKAGLQFPVGRVGRYLKQGRYCDRIGSGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIIPRHVQLAVRNDEELNKLLGNVTIAQGGVLPNIHNVLLPKKSKS 131
[Close]
BLAST of mRNA_H-akashiwo_Contig110.29.1 vs. uniprot
Match: A0A6U2JFS4_9STRA (Histone H2A n=6 Tax=Bacillariophyta TaxID=2836 RepID=A0A6U2JFS4_9STRA)

HSP 1 Score: 194 bits (493), Expect = 4.400e-62
Identity = 99/116 (85.34%), Postives = 108/116 (93.10%), Query Frame = 0 
Query:    3 GKAGRG-KKSQTKSSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRIVPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIHTVLLPKKT 117
            GK GRG KKS T S+KAGLQFPVGRIGRYL+QG+Y+ R+GAGAPVYLAAVLEYLCAEILELAGNAARDNKK+RIVPRH+ LAV+NDEELNKLLGGVTIA GGVLPNIH VLLPKK+
Sbjct:    5 GKGGRGGKKSTTSSAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIASGGVLPNIHAVLLPKKS 120
[Close]
BLAST of mRNA_H-akashiwo_Contig110.29.1 vs. uniprot
Match: D7G193_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G193_ECTSI)

HSP 1 Score: 196 bits (497), Expect = 6.220e-62
Identity = 97/115 (84.35%), Postives = 108/115 (93.91%), Query Frame = 0 
Query:    3 GKAGRGKKSQTKSSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRIVPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIHTVLLPKKT 117
            GK GRGKKS T+S+KAGLQFPVGR+GR+LK+G+Y++RVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK RI+PRH+QLAVRNDEELNKLLG VTIA GGVLPNIH VLLPKKT
Sbjct:   50 GKGGRGKKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKT 164
[Close]
BLAST of mRNA_H-akashiwo_Contig110.29.1 vs. uniprot
Match: A0A6H5KG79_9PHAE (Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG79_9PHAE)

HSP 1 Score: 194 bits (493), Expect = 6.700e-62
Identity = 98/115 (85.22%), Postives = 106/115 (92.17%), Query Frame = 0 
Query:    3 GKAGRGKKSQTKSSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRIVPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIHTVLLPKKT 117
            GK GRGKKS +KSSKAGLQFPV RIGRYLK+G+Y+ RVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK RI+PRH+QLAVRNDEELNKLLG VTIA GGVLPNIH VLLPKK+
Sbjct:    5 GKGGRGKKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKS 119
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig110.29.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6V1P7M0_HETAK2.240e-7699.17Histone H2A n=2 Tax=Heterosigma akashiwo TaxID=282... [more]
A0A7S3UYM8_HETAK1.540e-6893.10Histone H2A n=1 Tax=Heterosigma akashiwo TaxID=282... [more]
A0A7S2V3S5_9STRA7.890e-6489.09Histone H2A n=1 Tax=Fibrocapsa japonica TaxID=9461... [more]
D7FWI9_ECTSI1.080e-6284.35Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
A0A7S2GRL8_9STRA1.120e-6285.96Histone H2A n=1 Tax=Helicotheca tamesis TaxID=3740... [more]
A0A836CG77_9STRA2.740e-6284.30Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R... [more]
A0A7R9YCM0_9STRA2.750e-6287.27Histone H2A n=1 Tax=Pinguiococcus pyrenoidosus Tax... [more]
A0A6U2JFS4_9STRA4.400e-6285.34Histone H2A n=6 Tax=Bacillariophyta TaxID=2836 Rep... [more]
D7G193_ECTSI6.220e-6284.35Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5KG79_9PHAE6.700e-6285.22Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002119Histone H2APRINTSPR00620HISTONEH2Acoord: 68..82
score: 82.16
coord: 10..32
score: 65.88
coord: 39..54
score: 90.36
coord: 96..114
score: 77.69
coord: 54..67
score: 87.07
IPR002119Histone H2ASMARTSM00414h2a4coord: 1..119
e-value: 1.1E-77
score: 274.1
IPR002119Histone H2APANTHERPTHR23430HISTONE H2Acoord: 9..119
IPR002119Histone H2ACDDcd00074H2Acoord: 2..116
e-value: 6.05816E-69
score: 200.639
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 2..120
e-value: 2.0E-63
score: 214.0
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 12..116
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 9..85
e-value: 3.1E-15
score: 56.7
IPR032454Histone H2A, C-terminal domainPFAMPF16211Histone_H2A_Ccoord: 88..119
e-value: 1.6E-20
score: 72.6
NoneNo IPR availablePIRSRPIRSR037942-1PIRSR037942-1coord: 1..118
e-value: 1.8E-53
score: 179.4
NoneNo IPR availablePANTHERPTHR23430:SF303HISTONE H2AXcoord: 9..119
IPR032458Histone H2A conserved sitePROSITEPS00046HISTONE_H2Acoord: 18..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig110contigH-akashiwo_Contig110:1263421..1263783 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig110.29.1mRNA_H-akashiwo_Contig110.29.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig110 1263421..1263783 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig110.29.1 ID=prot_H-akashiwo_Contig110.29.1|Name=mRNA_H-akashiwo_Contig110.29.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=121bp
MAGKAGRGKKSQTKSSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLAA
VLEYLCAEILELAGNAARDNKKTRIVPRHLQLAVRNDEELNKLLGGVTIA
QGGVLPNIHTVLLPKKTKTA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002119Histone_H2A
IPR009072Histone-fold
IPR007125Histone_H2A/H2B/H3
IPR032454Histone_H2A_C
IPR032458Histone_H2A_CS