mRNA_H-akashiwo_Contig967.6.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig967.6.1 vs. uniprot
Match: A0A7S4DG95_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DG95_HETAK) HSP 1 Score: 206 bits (523), Expect = 2.910e-66 Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 1 Query: 1 MEQEIPQAGHEDHQMVQPEQDDPPMVNGEGWPEYCNPAYKMPNLIEVKVVIEETGEERYIPVAIERAEYRKKYLGGYRHKKTGAVFHHAQSQTEISTGKKA 303 MEQEIPQAGHEDHQMVQPEQDDPPMVNGEGWPEYCNPAYKMPNLIEVKVVIEETGEERYIPVAIERAEYRKKYLGGYRHKKTGAVFHHAQSQTEISTGKKA Sbjct: 1 MEQEIPQAGHEDHQMVQPEQDDPPMVNGEGWPEYCNPAYKMPNLIEVKVVIEETGEERYIPVAIERAEYRKKYLGGYRHKKTGAVFHHAQSQTEISTGKKA 101
BLAST of mRNA_H-akashiwo_Contig967.6.1 vs. uniprot
Match: A0A7S2UXR8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXR8_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 3.120e-21 Identity = 39/62 (62.90%), Postives = 50/62 (80.65%), Query Frame = 1 Query: 91 WPEYCNPAYKMPNLIEVKVVIEETGEERYIPVAIERAEYRKKYLGGYRHKKTGAVFHHAQSQ 276 WP YCNP YKMP++IEV+V IEETGE RY+PV + + + RK+YLGGYRH++T V+HHA Q Sbjct: 58 WPPYCNPTYKMPSVIEVQVHIEETGETRYLPVFVNKFQGRKRYLGGYRHRETQKVYHHASCQ 119
BLAST of mRNA_H-akashiwo_Contig967.6.1 vs. uniprot
Match: A0A7S3H598_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H598_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 4.430e-14 Identity = 35/63 (55.56%), Postives = 43/63 (68.25%), Query Frame = 1 Query: 91 WPEYCNPAYKMPNLIEVKVVIEETGEERYIPVAIERAEYRKKYLGGYRHKKTGAVFHHAQSQT 279 WP YCNP Y MP+ I+VKV + + Y P+ IE+A KKYLGGYR+K G V+HHA SQT Sbjct: 56 WPSYCNPTYVMPDKIDVKVTV--GADTYYFPLDIEKASAPKKYLGGYRNKLNGYVYHHASSQT 116
BLAST of mRNA_H-akashiwo_Contig967.6.1 vs. uniprot
Match: A0A482US05_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482US05_9ARCH) HSP 1 Score: 67.0 bits (162), Expect = 1.440e-12 Identity = 35/65 (53.85%), Postives = 44/65 (67.69%), Query Frame = 1 Query: 76 VNGEGWPEYCNPAYKMPNLIEVKVVIEETGEERYIPVAIERAEYRKKYLGGYRHKKTGAVFHHAQ 270 V E WP+Y NP Y MP++IEVKV ++ E PV I +A+ K YLGGYR+K GAVFHHA+ Sbjct: 18 VATERWPDYVNPHYVMPDMIEVKVTVD--SETFLFPVHIVKAQGGKTYLGGYRNKINGAVFHHAR 80
BLAST of mRNA_H-akashiwo_Contig967.6.1 vs. uniprot
Match: A0A8J2SZI2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SZI2_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 8.650e-12 Identity = 36/72 (50.00%), Postives = 46/72 (63.89%), Query Frame = 1 Query: 70 PMVNGEGWPEYCNPAYKMPNLIEVKVVIEETGEERYIPVAIERAEYRKKYLGGYRHKKTGAVFHHAQSQTEI 285 P E WP Y +P+YKMP IEV V + ++ + V IE+ RK YLGGYRHKKTG V+HHA SQ+ + Sbjct: 13 PAAPTEEWPPYADPSYKMPASIEVTVQ-KRNEDDVTLTVNIEKENTRKPYLGGYRHKKTGRVYHHASSQSVV 83
BLAST of mRNA_H-akashiwo_Contig967.6.1 vs. uniprot
Match: A0A7S2CMW8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CMW8_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 1.190e-10 Identity = 41/93 (44.09%), Postives = 50/93 (53.76%), Query Frame = 1 Query: 25 GHEDHQMVQPEQDDPPMVNGEGWPEYCNPAYKMPNLIEVKVVIEETGEERYIPVAIER-AEYRKKYLGGYRHKKTGAVFHHAQSQTEISTGKK 300 G ED +QPE WP YC+P Y MPN + V V + G ++IE+ AE K YLGGYRHK TG V+HHA SQT K+ Sbjct: 21 GEEDTAPIQPE-----------WPSYCDPDYIMPNSMSVSVK-RQNGTIFKFDISIEKTAEKNKPYLGGYRHKGTGFVYHHASSQTPAGLDKR 101
BLAST of mRNA_H-akashiwo_Contig967.6.1 vs. uniprot
Match: A0A8J6JPY1_ELECQ (Ubiquitin-like domain-containing protein n=1 Tax=Eleutherodactylus coqui TaxID=57060 RepID=A0A8J6JPY1_ELECQ) HSP 1 Score: 65.1 bits (157), Expect = 4.050e-10 Identity = 35/57 (61.40%), Postives = 41/57 (71.93%), Query Frame = 1 Query: 115 YKMPNLIEVKVVIEETGEERY--IPVAIERAEYRKKYLGGYRHKKTGAVFHHAQSQT 279 Y MP++I V+V +TG+E Y I V IER YRK YLGGYRHK TG VFHHA +QT Sbjct: 248 YSMPDVITVRV---QTGDEAYQDIAVEIERLNYRKPYLGGYRHKVTGVVFHHAGTQT 301
BLAST of mRNA_H-akashiwo_Contig967.6.1 vs. uniprot
Match: UPI001ABE68A9 (IQ and ubiquitin-like domain-containing protein n=2 Tax=Bufo TaxID=8383 RepID=UPI001ABE68A9) HSP 1 Score: 62.8 bits (151), Expect = 2.620e-9 Identity = 34/57 (59.65%), Postives = 40/57 (70.18%), Query Frame = 1 Query: 115 YKMPNLIEVKVVIEETGEERY--IPVAIERAEYRKKYLGGYRHKKTGAVFHHAQSQT 279 Y MP++I V+V +TG+E Y I V IER YRK YLGGYRHK T VFHHA +QT Sbjct: 255 YSMPDVITVRV---QTGDETYQDIAVEIERLNYRKPYLGGYRHKVTSVVFHHAGTQT 308
BLAST of mRNA_H-akashiwo_Contig967.6.1 vs. uniprot
Match: A0A6I8RBR8_XENTR (IQ motif and ubiquitin domain-containing n=3 Tax=Xenopus tropicalis TaxID=8364 RepID=A0A6I8RBR8_XENTR) HSP 1 Score: 60.8 bits (146), Expect = 1.250e-8 Identity = 32/53 (60.38%), Postives = 38/53 (71.70%), Query Frame = 1 Query: 121 MPNLIEVKVVIEETGEERYIPVAIERAEYRKKYLGGYRHKKTGAVFHHAQSQT 279 MP++I V+V +E G R + V IER YRK YLGGYRHK TG VFHHA +QT Sbjct: 281 MPDVITVRVQTDE-GSYRDLVVEIERLNYRKPYLGGYRHKATGVVFHHAGTQT 332
BLAST of mRNA_H-akashiwo_Contig967.6.1 vs. uniprot
Match: UPI0008549550 (IQ and ubiquitin-like domain-containing protein n=1 Tax=Nanorana parkeri TaxID=125878 RepID=UPI0008549550) HSP 1 Score: 60.8 bits (146), Expect = 1.250e-8 Identity = 33/57 (57.89%), Postives = 40/57 (70.18%), Query Frame = 1 Query: 115 YKMPNLIEVKVVIEETGEERY--IPVAIERAEYRKKYLGGYRHKKTGAVFHHAQSQT 279 Y MP++I V+V +TGE+ Y I V IER YRK YLGGYRHK T V+HHA +QT Sbjct: 279 YSMPDVITVRV---QTGEDAYQDIAVEIERLNYRKPYLGGYRHKLTEVVYHHAGTQT 332 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig967.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig967.6.1 >prot_H-akashiwo_Contig967.6.1 ID=prot_H-akashiwo_Contig967.6.1|Name=mRNA_H-akashiwo_Contig967.6.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=101bp MEQEIPQAGHEDHQMVQPEQDDPPMVNGEGWPEYCNPAYKMPNLIEVKVVback to top mRNA from alignment at H-akashiwo_Contig967:379625..380229- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig967.6.1 ID=mRNA_H-akashiwo_Contig967.6.1|Name=mRNA_H-akashiwo_Contig967.6.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=605bp|location=Sequence derived from alignment at H-akashiwo_Contig967:379625..380229- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig967:379625..380229- >mRNA_H-akashiwo_Contig967.6.1 ID=mRNA_H-akashiwo_Contig967.6.1|Name=mRNA_H-akashiwo_Contig967.6.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=303bp|location=Sequence derived from alignment at H-akashiwo_Contig967:379625..380229- (Heterosigma akashiwo CCMP452)back to top |