mRNA_H-akashiwo_Contig961.8.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig961.8.1 vs. uniprot
Match: A0A813CJV7_9DINO (ML4 protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A813CJV7_9DINO) HSP 1 Score: 75.5 bits (184), Expect = 1.200e-15 Identity = 40/91 (43.96%), Postives = 65/91 (71.43%), Query Frame = 1 Query: 7 WSP------VFSVITRCYGSLILGQSWITFSARKNSNLKIKKALVQAYFIIFLLTFVSLLTAQLKEN-FHFLNWLNVLCFFCLCTFYGYFA 258 W+P + V+ R YG+LILGQS++T++A++ + +++ A V+AY ++F LT ++LL AQL ++ +H LNWLN+L F CL FYG+F+ Sbjct: 20 WNPDDGQVKITHVVIRLYGALILGQSFLTWAAKQTDDGRVRLAAVRAYAVVFGLTTLALLRAQLTDSTWHVLNWLNLLLFACLAAFYGWFS 110
BLAST of mRNA_H-akashiwo_Contig961.8.1 vs. uniprot
Match: A0A813CV67_9DINO (ML4 protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813CV67_9DINO) HSP 1 Score: 75.5 bits (184), Expect = 3.450e-15 Identity = 40/91 (43.96%), Postives = 65/91 (71.43%), Query Frame = 1 Query: 7 WSP------VFSVITRCYGSLILGQSWITFSARKNSNLKIKKALVQAYFIIFLLTFVSLLTAQLKEN-FHFLNWLNVLCFFCLCTFYGYFA 258 W+P + V+ R YG+LILGQS++T++A++ + +++ A V+AY ++F LT ++LL AQL ++ +H LNWLN+L F CL FYG+F+ Sbjct: 54 WNPDDGQVKITHVVIRLYGALILGQSFLTWAAKQTDDGRVRLAAVRAYAVVFGLTTLALLRAQLTDSTWHVLNWLNLLLFACLAAFYGWFS 144
BLAST of mRNA_H-akashiwo_Contig961.8.1 vs. uniprot
Match: A0A1Q9DKB1_SYMMI (Protein MEI2-like 4 n=4 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9DKB1_SYMMI) HSP 1 Score: 75.5 bits (184), Expect = 5.160e-14 Identity = 40/91 (43.96%), Postives = 65/91 (71.43%), Query Frame = 1 Query: 7 WSP------VFSVITRCYGSLILGQSWITFSARKNSNLKIKKALVQAYFIIFLLTFVSLLTAQLKEN-FHFLNWLNVLCFFCLCTFYGYFA 258 W+P + V+ R YG+LILGQS++T++A++ + +++ A V+AY ++F LT ++LL AQL ++ +H LNWLN+L F CL FYG+F+ Sbjct: 48 WNPDDGQVKITHVVIRLYGALILGQSFLTWAAKQTDDGRVRLAAVRAYAVVFGLTTLALLRAQLTDSTWHVLNWLNLLLFACLAAFYGWFS 138
BLAST of mRNA_H-akashiwo_Contig961.8.1 vs. uniprot
Match: A0A5A8D739_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D739_CAFRO) HSP 1 Score: 65.5 bits (158), Expect = 1.810e-11 Identity = 36/86 (41.86%), Postives = 52/86 (60.47%), Query Frame = 1 Query: 1 GSWSPVFSVITRCYGSLILGQSWITFSARKNSNLKIKKALVQAYFIIFLLTFVSLLTAQLKENFHFLNWLNVLCFFCLCTFYGYFA 258 G + ++ R YG++IL Q +IT++AR + ++K LVQ Y ++F LTF++LL AQL LNWLNV F L FY +F Sbjct: 53 GGSEKIVHLVVRLYGAIILAQGFITWTARSVGDGAMRKGLVQTYALMFALTFIALLRAQLTGGMLALNWLNVFMFGALSGFYSWFV 138
BLAST of mRNA_H-akashiwo_Contig961.8.1 vs. uniprot
Match: A0A7S2UWE6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWE6_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 2.560e-11 Identity = 38/78 (48.72%), Postives = 52/78 (66.67%), Query Frame = 1 Query: 28 ITRCYGSLILGQSWITFSARKNSNLKIKKALVQAYFIIFLLTFVSLLTAQLKENFHF--LNWLNVLCFFCLCTFYGYF 255 +TR YG LI+ QSWI ++ARK + I++A VQAYF F+LTF+SLL AQL +NW+ ++ F L +YGYF Sbjct: 60 LTRVYGCLIMAQSWIVWNARKVDDGVIRRAFVQAYFGCFVLTFLSLLRAQLTAETLMVPMNWVIIVVFAFLSIYYGYF 137
BLAST of mRNA_H-akashiwo_Contig961.8.1 vs. uniprot
Match: A0A813KVQ1_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813KVQ1_POLGL) HSP 1 Score: 65.1 bits (157), Expect = 6.390e-11 Identity = 36/78 (46.15%), Postives = 55/78 (70.51%), Query Frame = 1 Query: 25 VITRCYGSLILGQSWITFSARKNSNLKIKKALVQAYFIIFLLTFVSLLTAQLKEN-FHFLNWLNVLCFFCLCTFYGYF 255 V+ R YG+LI+GQS I + RK + +++A+V+AYF++F LT ++LL AQL ++ +H N LN+L F L FYG+F Sbjct: 113 VVIRIYGALIVGQSLIVWEVRKTDDGVVRRAIVRAYFVVFTLTTLALLRAQLTDSTWHVANLLNLLLFGALAGFYGWF 190
BLAST of mRNA_H-akashiwo_Contig961.8.1 vs. uniprot
Match: A0A7S3XH98_OXYMA (Hypothetical protein n=2 Tax=Oxyrrhis marina TaxID=2969 RepID=A0A7S3XH98_OXYMA) HSP 1 Score: 58.5 bits (140), Expect = 7.170e-9 Identity = 32/79 (40.51%), Postives = 54/79 (68.35%), Query Frame = 1 Query: 25 VITRCYGSLILGQSWITFSARKNSNLKIKKALVQAYFIIFLLTFVSLLTAQLKE-NFHFLNWLNVLCFFCLCTFYGYFA 258 V+ R YG+L+ GQ + +S + S+ +++++V AYF++FLLT + LL + L + ++H +N +NV FFCL FYG+F Sbjct: 51 VVIRMYGALVFGQGIMCYSMQWVSDGVVRRSVVVAYFVVFLLTEIVLLRSMLTDTHWHSVNAMNVGLFFCLTCFYGWFG 129 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig961.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig961.8.1 >prot_H-akashiwo_Contig961.8.1 ID=prot_H-akashiwo_Contig961.8.1|Name=mRNA_H-akashiwo_Contig961.8.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=86bp GSWSPVFSVITRCYGSLILGQSWITFSARKNSNLKIKKALVQAYFIIFLLback to top mRNA from alignment at H-akashiwo_Contig961:428332..428590+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig961.8.1 ID=mRNA_H-akashiwo_Contig961.8.1|Name=mRNA_H-akashiwo_Contig961.8.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=259bp|location=Sequence derived from alignment at H-akashiwo_Contig961:428332..428590+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig961:428332..428590+ >mRNA_H-akashiwo_Contig961.8.1 ID=mRNA_H-akashiwo_Contig961.8.1|Name=mRNA_H-akashiwo_Contig961.8.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=258bp|location=Sequence derived from alignment at H-akashiwo_Contig961:428332..428590+ (Heterosigma akashiwo CCMP452)back to top |