mRNA_H-akashiwo_Contig961.7.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig961.7.1 vs. uniprot
Match: A0A7S3XS93_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XS93_HETAK) HSP 1 Score: 196 bits (499), Expect = 3.890e-59 Identity = 100/105 (95.24%), Postives = 102/105 (97.14%), Query Frame = 1 Query: 1 AGATVASAVVGVRTVHAFGMNEAVLSDYRAILEKKMKSDAKKSSIAGVALGYSQGVPMFVYAFLFWLGAYLVNQGDLNFEDMLTALFCLVSVSFSMGDAAGLAGD 315 AGATVASAVVGVRTVHAFGMNEAVL DYR ILEKKMKSDAKKSSIAG+ALGYSQGVPMFVYAFLFWLGAYLVNQGDLNFEDML ALFCL+SVSFSMGDAAGLAGD Sbjct: 47 AGATVASAVVGVRTVHAFGMNEAVLGDYRVILEKKMKSDAKKSSIAGIALGYSQGVPMFVYAFLFWLGAYLVNQGDLNFEDMLAALFCLISVSFSMGDAAGLAGD 151
BLAST of mRNA_H-akashiwo_Contig961.7.1 vs. uniprot
Match: A0A7S4D629_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D629_HETAK) HSP 1 Score: 196 bits (499), Expect = 4.450e-59 Identity = 100/105 (95.24%), Postives = 102/105 (97.14%), Query Frame = 1 Query: 1 AGATVASAVVGVRTVHAFGMNEAVLSDYRAILEKKMKSDAKKSSIAGVALGYSQGVPMFVYAFLFWLGAYLVNQGDLNFEDMLTALFCLVSVSFSMGDAAGLAGD 315 AGATVASAVVGVRTVHAFGMNEAVL DYR ILEKKMKSDAKKSSIAG+ALGYSQGVPMFVYAFLFWLGAYLVNQGDLNFEDML ALFCL+SVSFSMGDAAGLAGD Sbjct: 47 AGATVASAVVGVRTVHAFGMNEAVLGDYRVILEKKMKSDAKKSSIAGIALGYSQGVPMFVYAFLFWLGAYLVNQGDLNFEDMLAALFCLISVSFSMGDAAGLAGD 151
BLAST of mRNA_H-akashiwo_Contig961.7.1 vs. uniprot
Match: A0A7S3XS82_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XS82_HETAK) HSP 1 Score: 116 bits (291), Expect = 2.230e-30 Identity = 54/105 (51.43%), Postives = 75/105 (71.43%), Query Frame = 1 Query: 1 AGATVASAVVGVRTVHAFGMNEAVLSDYRAILEKKMKSDAKKSSIAGVALGYSQGVPMFVYAFLFWLGAYLVNQGDLNFEDMLTALFCLVSVSFSMGDAAGLAGD 315 AGAT+++A+ G+RTVHAFGM + V +Y +LEK + K + +G ALGY QG PM YAFLFW GA+L+ +GD+ FE M+++LF L++ +F M D A LAGD Sbjct: 27 AGATISAAIQGIRTVHAFGMEKVVADEYALLLEKNASIEKKAACASGAALGYGQGAPMMFYAFLFWFGAFLIAEGDVTFEAMMSSLFALMTSAFGMADGAQLAGD 131
BLAST of mRNA_H-akashiwo_Contig961.7.1 vs. uniprot
Match: D7FHL1_ECTSI (ATP-binding cassette, sub-family B (MDR/TAP), member 1A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL1_ECTSI) HSP 1 Score: 75.9 bits (185), Expect = 7.880e-14 Identity = 35/95 (36.84%), Postives = 59/95 (62.11%), Query Frame = 1 Query: 19 SAVVGVRTVHAFGMNEAVLSDYRAILEKKMKSDAKKSSIAGVALGYSQGVPMFVYAFLFWLGAYLVNQGDLNFEDMLTALFCLVSVSFSMGDAAG 303 SA+ G+ TV AF M E + ++Y+ E + + K+ IAG A GYSQG+ +V+A +F++GA +V+ G + + D TA+F ++ +F +G G Sbjct: 904 SALQGMSTVAAFNMQERLAAEYKQASEGSLDARRKRGLIAGAAFGYSQGITFWVFALMFYVGAIMVDNGQVEYGDFFTAMFAVIFGAFGVGQITG 998
BLAST of mRNA_H-akashiwo_Contig961.7.1 vs. uniprot
Match: A0A6H5JWI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI0_9PHAE) HSP 1 Score: 72.8 bits (177), Expect = 7.740e-13 Identity = 33/88 (37.50%), Postives = 54/88 (61.36%), Query Frame = 1 Query: 40 TVHAFGMNEAVLSDYRAILEKKMKSDAKKSSIAGVALGYSQGVPMFVYAFLFWLGAYLVNQGDLNFEDMLTALFCLVSVSFSMGDAAG 303 TV AF M E + +DY+ E + + K+ IAG A GYSQG+ +V+A +F+ GA +V+ G + + D TA+F ++ +F +G +G Sbjct: 3 TVTAFNMQERLAADYKQASEGSLDARRKRGLIAGAAFGYSQGITFWVFALMFYAGAIMVDNGQVEYGDFFTAMFAVIFGAFGVGQISG 90
BLAST of mRNA_H-akashiwo_Contig961.7.1 vs. uniprot
Match: B1PRK4_CYPGI (ATP-binding cassette sub-family B member 1 (Fragment) n=1 Tax=Cyphoma gibbosum TaxID=217775 RepID=B1PRK4_CYPGI) HSP 1 Score: 68.6 bits (166), Expect = 2.770e-11 Identity = 39/105 (37.14%), Postives = 55/105 (52.38%), Query Frame = 1 Query: 1 AGATVASAVVGVRTVHAFGMNEAVLSDYRAILEKKMKSDAKKSSIAGVALGYSQGVPMFVYAFLFWLGAYLVNQGDLNFEDMLTALFCLVSVSFSMGDAAGLAGD 315 AG T A+ +RTV + G + + L S KK I G A G+SQG FVYA F LGAYL+ Q ++NFED+ +V + ++G+A+ A D Sbjct: 198 AGKTATEAIDNIRTVVSLGREITMHDRFMTHLRGPYNSALKKGHIVGFAFGFSQGAIFFVYAASFILGAYLIEQSEMNFEDVFMVFSAIVFSAMAVGNASAFAPD 302
BLAST of mRNA_H-akashiwo_Contig961.7.1 vs. uniprot
Match: A0A6G0X3T6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X3T6_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 1.380e-10 Identity = 31/104 (29.81%), Postives = 56/104 (53.85%), Query Frame = 1 Query: 4 GATVASAVVGVRTVHAFGMNEAVLSDYRAILEKKMKSDAKKSSIAGVALGYSQGVPMFVYAFLFWLGAYLVNQGDLNFEDMLTALFCLVSVSFSMGDAAGLAGD 315 G+ A+ RT+ AFG+ E + Y +L+ ++ +A+ + + GV G++ VYA +FW GA L+N G ++F+ ++ L ++ S +G A GD Sbjct: 896 GSIATEAITNARTITAFGLQENFIERYNTLLDGPLRQEARAAHVNGVFSGFAGFSTFAVYALVFWYGARLMNDGAIDFKQLMNTLMAIMMASQGLGQTASQLGD 999
BLAST of mRNA_H-akashiwo_Contig961.7.1 vs. uniprot
Match: A0A662XHL0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XHL0_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 2.490e-10 Identity = 30/104 (28.85%), Postives = 58/104 (55.77%), Query Frame = 1 Query: 4 GATVASAVVGVRTVHAFGMNEAVLSDYRAILEKKMKSDAKKSSIAGVALGYSQGVPMFVYAFLFWLGAYLVNQGDLNFEDMLTALFCLVSVSFSMGDAAGLAGD 315 GA + + +RTV + G+ ++ + +L++ MKS + + + G+A+G+S + YAF FW G LVN G ++F ++ +L ++ S S+G++ D Sbjct: 319 GAHASEVLSSIRTVVSLGLEKSSCDKFSTLLDEPMKSGERDAQVNGLAVGFSSFIVFATYAFAFWYGGKLVNDGSISFRQLMRSLMAIIMSSQSVGNSVAYVAD 422
BLAST of mRNA_H-akashiwo_Contig961.7.1 vs. uniprot
Match: UPI0014580F7D (LOW QUALITY PROTEIN: ATP-dependent translocase ABCB1-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI0014580F7D) HSP 1 Score: 63.2 bits (152), Expect = 2.280e-9 Identity = 33/105 (31.43%), Postives = 58/105 (55.24%), Query Frame = 1 Query: 1 AGATVASAVVGVRTVHAFGMNEAVLSDYRAILEKKMKSDAKKSSIAGVALGYSQGVPMFVYAFLFWLGAYLVNQGDLNFEDMLTALFCLVSVSFSMGDAAGLAGD 315 AG + + +RTV A +A Y L+ K+ +K+ + G+A +SQ V F++A F+ GAYLV +G+++F+D+ +V + +MG+A+ A D Sbjct: 954 AGKVASEGIGNIRTVAALTKEDAFFRLYTESLKAPYKASKRKAHLIGMAFSFSQSVVYFLHAAAFYYGAYLVREGEMDFDDVFKVFAAIVFGAMAMGNASAFAPD 1058
BLAST of mRNA_H-akashiwo_Contig961.7.1 vs. uniprot
Match: A0A2R5G2F3_9STRA (ABC transporter B family member 3 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G2F3_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 2.280e-9 Identity = 34/105 (32.38%), Postives = 57/105 (54.29%), Query Frame = 1 Query: 1 AGATVASAVVGVRTVHAFGMNEAVLSDYRAILEKKMKSDAKKSSIAGVALGYSQGVPMFVYAFLFWLGAYLVNQGDLNFEDMLTALFCLVSVSFSMGDAAGLAGD 315 AG + ++ G+RTV AF + + V+S Y + L+ + +K +AG+ +G+SQGV +Y F+ A L+ F ++L A+F L+ S G A +A D Sbjct: 975 AGQVLQESISGIRTVTAFSLRKRVVSLYDSFLDGPTRLAVRKGLLAGLGMGFSQGVIFCIYGIAFYYTAVLIETQGFVFSELLRAVFLLLFAGVSAGQAGAMAPD 1079 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig961.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig961.7.1 >prot_H-akashiwo_Contig961.7.1 ID=prot_H-akashiwo_Contig961.7.1|Name=mRNA_H-akashiwo_Contig961.7.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=105bp AGATVASAVVGVRTVHAFGMNEAVLSDYRAILEKKMKSDAKKSSIAGVALback to top mRNA from alignment at H-akashiwo_Contig961:381177..381493+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig961.7.1 ID=mRNA_H-akashiwo_Contig961.7.1|Name=mRNA_H-akashiwo_Contig961.7.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=317bp|location=Sequence derived from alignment at H-akashiwo_Contig961:381177..381493+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig961:381177..381493+ >mRNA_H-akashiwo_Contig961.7.1 ID=mRNA_H-akashiwo_Contig961.7.1|Name=mRNA_H-akashiwo_Contig961.7.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=315bp|location=Sequence derived from alignment at H-akashiwo_Contig961:381177..381493+ (Heterosigma akashiwo CCMP452)back to top |