mRNA_H-akashiwo_Contig958.2.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig958.2.1 vs. uniprot
Match: A0A7S4DD78_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD78_HETAK) HSP 1 Score: 597 bits (1540), Expect = 5.250e-215 Identity = 295/296 (99.66%), Postives = 296/296 (100.00%), Query Frame = 1 Query: 1 GSSQAIVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLEEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKALNAAN 888 GSSQA+VSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLEEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKALNAAN Sbjct: 44 GSSQAVVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLEEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKALNAAN 339
BLAST of mRNA_H-akashiwo_Contig958.2.1 vs. uniprot
Match: A0A7S3Y6S2_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6S2_HETAK) HSP 1 Score: 280 bits (716), Expect = 5.430e-91 Identity = 137/139 (98.56%), Postives = 139/139 (100.00%), Query Frame = 1 Query: 1 GSSQAIVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYL 417 GSSQAIVSEFKQSLASKY+LTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTP+DHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYL Sbjct: 130 GSSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPIDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYL 268
BLAST of mRNA_H-akashiwo_Contig958.2.1 vs. uniprot
Match: A0A7S3Y1P1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1P1_HETAK) HSP 1 Score: 244 bits (623), Expect = 2.160e-70 Identity = 124/297 (41.75%), Postives = 186/297 (62.63%), Query Frame = 1 Query: 4 SSQAIVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTPGFKAELS--DANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLEEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKALNAAN 888 S ++ +S K++++ Y+++D GE+ ILGIKV RD+ + LSQ SFI++A KF + P++ +D+ LS +A +RS+VGT+ W+A WT PE+A+++H L + +P A RYL T+ + + LGG L L A++D+DFC++R G+S +G+ +FLG +PI+WSS++Q VT +T EAEY++LR+AV D+MWL+ LLE +G Q P+ EDN AC+ WAND V+K RH HVSYH KE V I + Y+ T Q+AD+ TK L+ N Sbjct: 690 SDKSELSRIKKAISLGYNVSDMGEIESILGIKVQRDRTARTITLSQHSFIEEACEKFQVRSYEPVTNPVNKGIDVNINTDTSRRLSTFEAKKFRSLVGTVNWLALWTFPEVAYSIHTLSKRFTSPSANCLAASYHLLRYLWWTEDKGVTLGGPLNLTAYADADFCSERHKGRSRSGFAIFLGFSPIIWSSRMQHCVTRNTTEAEYVSLRNAVTDVMWLKRLLESLGYKQG-CVPIYEDNKACITWANDETVSKSARHIHVSYHYTKEMVQSKEIEVKYVDTKHQIADVFTKPLDFNN 985
BLAST of mRNA_H-akashiwo_Contig958.2.1 vs. uniprot
Match: A0A4S4K468_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A4S4K468_9APHY) HSP 1 Score: 197 bits (501), Expect = 2.710e-56 Identity = 111/297 (37.37%), Postives = 166/297 (55.89%), Query Frame = 1 Query: 1 GSSQAIVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPT--PGFKAELSDANL--YRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGG-DLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLEEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKAL 876 GSS ++SE+K+ + KY LTD GE++ +LGIKV RD+ + LSQ ++I LA+F L P+D + LT + P A+++ YR +G+L + A TRP+++F + L + NP H+EAV+R FRYL GT++ L+ GG L + D+D + ++TGY+ + + WSSK Q VT ST EAEY+A A K+ MW+R LL E+ P PT + D+ + + D + R +H + YH + V GT+R+ Y T+D AD LTKAL Sbjct: 152 GSSTPLISEYKRRIGEKYPLTDLGEVSWLLGIKVARDREARTLSLSQHAYIDSILARFNFTDLKPSSIPMDPNLQLTKSQCPTSLADIARMRKIPYREAIGSLMYAAVGTRPDISFAISTLAQFSQNPGWTHWEAVKRVFRYLLGTKNLVLQYGGVQRGLEGYVDADGASQE-HRHAITGYVFLVDGGAVSWSSKKQELVTLSTTEAEYVAATHAAKEAMWIRRLLGEVFRPLDGPTTLYSDSQSAIALTKDGQYHARTKHIDIRYHFIRYVVEAGTLRLIYCPTNDMTADTLTKAL 447
BLAST of mRNA_H-akashiwo_Contig958.2.1 vs. uniprot
Match: A0A2I0XAK1_9ASPA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0XAK1_9ASPA) HSP 1 Score: 201 bits (511), Expect = 2.070e-55 Identity = 113/296 (38.18%), Postives = 174/296 (58.78%), Query Frame = 1 Query: 1 GSSQAIVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTPGFKAELSDAN--LYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRL-GGDLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLEEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKALN 879 G+ Q + + Q+L S++++ D G+L+Q LGI+V HLSQ F + L + G+ TP + T +A L+ AN LYR + G+L ++ TRP+++F V+K+ + NP HFE+++R RY+ GT L L GGDL LR+++D+D+ D D KS+TGY FLG + I WS K Q AV S+ EAEY AL +A ++ W+R LL E+ CPQH PTP+ DN++ + AN+ + + R +H V H + + +I++ +I T DQ+AD+ TK L+ Sbjct: 498 GNCQQAIKQLLQTLNSRFTMKDLGQLSQFLGIQVTHTPSG--LHLSQGHFAQTILHRAGMLNCKPVSTPSQIKNNSTN----QASLAFANPSLYRQLAGSLQYLT-LTRPDISFAVNKVCQHMQNPTNLHFESLKRLLRYIHGTLHVGLPLSGGDLTLRSYADADWAGDTSDRKSITGYCNFLGHSLISWSVKKQNAVARSSTEAEYRALAAAAAEVTWIRRLLHELDCPQHSPTPLYCDNTSAIALANNPVFHARTKHIDVDCHYIRNCIKENSIQVHHISTKDQIADLFTKPLH 786
BLAST of mRNA_H-akashiwo_Contig958.2.1 vs. uniprot
Match: A0A6A3GI70_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=A0A6A3GI70_9STRA) HSP 1 Score: 188 bits (477), Expect = 3.090e-54 Identity = 102/297 (34.34%), Postives = 166/297 (55.89%), Query Frame = 1 Query: 10 QAIVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTPGFKAELSDANL----YRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDL--VLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLEEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKALNA 882 +A+++ K +A K+ + D G ILGI++ D + +S ++ + + KFG + C TPL+ V LT + E A + YRS+VG+L ++A TRP+++ V KL R NP KH++A + RYL T+ + G L L A+SD+D+ +R D +SV+G +L L AP+VW S Q V S+ EAEY+AL VK+ +W+R LL+++G Q T + EDN + A ++ R +H + YH +E+V + + Y+ T++Q+AD +TK L++ Sbjct: 8 KAVIASVKAGIAEKFRIKDMGRARFILGIEIDYDMERRTLGISHKAYTESIIKKFGQENAKPCLTPLEPGVQLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGLLGTQLEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMRRLLKDIGAEQVGATVIYEDNQGAMALAKNVGYQARTKHIDIRYHFIREKVVSDEVELQYVDTNNQLADFMTKCLSS 304
BLAST of mRNA_H-akashiwo_Contig958.2.1 vs. uniprot
Match: A0A6A4DK21_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A4DK21_9STRA) HSP 1 Score: 187 bits (474), Expect = 7.360e-54 Identity = 105/294 (35.71%), Postives = 163/294 (55.44%), Query Frame = 1 Query: 13 AIVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPT--PGFKAELS--DANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLV--LRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLEEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKAL 876 A ++ K + + L D G + ILGI+V D +K L Q +I D + +F TP+D ++ +T P +AE++ +RS++G+L+++A TRP++A V +L R NP +H++A + RYLKGT++ + G + L A+SD+D+ +DR D +SV+G +L L AP+VW + Q V ST E EY+AL VK+ MW R LL+ +G Q T + EDN + A + R +H + YH +E++ G I + YI T +QVAD LTK L Sbjct: 2 ATINTVKDKIRHSFKLKDLGAVRYILGIEVHHDIADKTLMLRQPRYIDDLVQRFNQTEAHPSVTPIDLSLPVTKEDQPETQAEMTIMRGKPFRSIIGSLSYLAGSTRPDIAVAVSRLSRYLENPGIRHWDAAIKIVRYLKGTRNYGVHFDGKMPPELIAYSDADWGSDRDDRRSVSGTVLMLFSAPVVWKTGFQKTVALSTTETEYMALTMCVKECMWARLLLKNLGLKQEGATTIHEDNQGAIALARNTGYQSRTKHISIRYHYLRERIIAGDIELKYINTKEQVADFLTKGL 295
BLAST of mRNA_H-akashiwo_Contig958.2.1 vs. uniprot
Match: A0A6A3JMT1_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3JMT1_9STRA) HSP 1 Score: 189 bits (479), Expect = 1.130e-53 Identity = 105/294 (35.71%), Postives = 161/294 (54.76%), Query Frame = 1 Query: 13 AIVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPLDHTVDLT----PTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLV--LRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLEEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKAL 876 A ++ K + + L D G + ILGI+V D K L Q +I D + +F TP+D ++ +T P + + +RS++G+L+++A TRP++A V +L R NP +H++A + RYLKGT++ + GG + L A+SD+D+ +DR D +SV+G +L L AP+VW + Q V ST EAEY+AL VK+ MW R LL+ +G Q T + EDN + A + R +H + YH +E++ G I + YI T +QVAD LTK L Sbjct: 82 ATINTVKDKIRHSFKLKDLGAVRYILGIEVHHDIAEKTLMLRQPRYIDDLVQRFNQTEAHPSVTPIDLSLPVTKEDQPETQEEMTIMRGKPFRSIIGSLSYLAGSTRPDIAVAVSRLSRYLENPGIRHWDAAIKIVRYLKGTRNYGVHFGGKMSPELIAYSDADWGSDRDDRRSVSGTVLMLFGAPVVWKTGYQKTVALSTTEAEYMALTMCVKECMWARLLLKNLGLKQEGATTIHEDNQGAIALARNTGYQSRTKHISIRYHYLRERIIAGDIELKYINTKEQVADFLTKGL 375
BLAST of mRNA_H-akashiwo_Contig958.2.1 vs. uniprot
Match: A0A2R6PCF8_9APHY (Uncharacterized protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A2R6PCF8_9APHY) HSP 1 Score: 197 bits (502), Expect = 1.690e-53 Identity = 111/297 (37.37%), Postives = 166/297 (55.89%), Query Frame = 1 Query: 1 GSSQAIVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPT--PGFKAELSDANL--YRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGG-DLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLEEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKAL 876 GSS ++SE+K+ + KY LTD GE++ +LGIKV RD+ + LSQ ++I LA+F L P+D + LT + P A+++ YR +G+L + A TRP+++F + L + NP H+EAV+R FRYL GT++ L+ GG L + D+D + ++TGY+ + + WSSK Q VT ST EAEY+A A K+ MW+R LL E+ P PT + D+ + + D + R +H + YH + V GT+R+ Y T+D AD LTKAL Sbjct: 1169 GSSTPLISEYKRRIGEKYPLTDLGEVSWLLGIKVARDREARTLSLSQHAYIDSILARFNFTDLKPSSIPMDPNLQLTKSQCPTSLADIARMRKIPYREAIGSLMYAAVGTRPDISFAISTLAQFSQNPGWTHWEAVKRVFRYLLGTKNLVLQYGGVQRGLEGYVDADGASQE-HRHAITGYVFLVDGGAVSWSSKKQELVTLSTTEAEYVAATHAAKEAMWIRQLLGEVFRPLDGPTTLYSDSQSAIALTKDGQYHARTKHIDIRYHFIRYVVEAGTLRLIYCPTNDMTADTLTKAL 1464
BLAST of mRNA_H-akashiwo_Contig958.2.1 vs. uniprot
Match: A0A8D8ANK3_CULPI (Copia protein n=1 Tax=Culex pipiens TaxID=7175 RepID=A0A8D8ANK3_CULPI) HSP 1 Score: 189 bits (479), Expect = 1.900e-53 Identity = 105/293 (35.84%), Postives = 164/293 (55.97%), Query Frame = 1 Query: 10 QAIVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGG--DLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLEEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKALNA 882 + ++ ++ L S+ +T G+++ LGI++ +D + L Q +FI + +FG+D K P+D G +L+D Y S++G+L +++ TRP++A +V L R P + +R RYL T L LGG D L +SD+D+ D D KS +GY+ LG A + W+SK QG V+TST+EAEY+AL A +D +WLRSLLE++ Q PT + EDN +C+++A KR++H YH +E TI++ Y + D +ADILTK L + Sbjct: 111 EEAINRIERELQSRLEITRLGDISLFLGIEIAKDTSG-VYALKQQAFINKLVKRFGMDGAKGSKFPMDP--GYFKVSGSSKKLADNQEYHSLIGSLLYLSTHTRPDIAASVGILSRKVSCPSQLDWTEARRILRYLISTADHRLVLGGAEDFKLVGYSDADWAGDSADRKSCSGYLFRLGGATVNWTSKKQGCVSTSTMEAEYVALSQAAQDAVWLRSLLEDINEKQLRPTVIFEDNRSCLDFAALDQQKKRSKHIDTRYHYTRELCLNNTIKLEYCASEDMIADILTKPLGS 400 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig958.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig958.2.1 >prot_H-akashiwo_Contig958.2.1 ID=prot_H-akashiwo_Contig958.2.1|Name=mRNA_H-akashiwo_Contig958.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=296bp GSSQAIVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFback to top mRNA from alignment at H-akashiwo_Contig958:201312..202199- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig958.2.1 ID=mRNA_H-akashiwo_Contig958.2.1|Name=mRNA_H-akashiwo_Contig958.2.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=888bp|location=Sequence derived from alignment at H-akashiwo_Contig958:201312..202199- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig958:201312..202199- >mRNA_H-akashiwo_Contig958.2.1 ID=mRNA_H-akashiwo_Contig958.2.1|Name=mRNA_H-akashiwo_Contig958.2.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=888bp|location=Sequence derived from alignment at H-akashiwo_Contig958:201312..202199- (Heterosigma akashiwo CCMP452)back to top |