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Homology
BLAST of mRNA_H-akashiwo_Contig953.5.1 vs. uniprot
Match: A0A6V1NTG5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NTG5_HETAK) HSP 1 Score: 315 bits (808), Expect = 1.790e-108 Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 2
Query: 2 NNSKMDEIDKIIAEEGHVYDQKASFAQWLMYFGVGLIVALLPNFLYLSYMFGMSLSQHAGQIALVGVVCAALLAQGYNGIANEKKIQLLAKREVPRSGGGEARRALHKACAAEAGVFALAAGNATFLGLFLTSAFYLVPRVVSAAAPAPASHLLSCVGAAAALAWPR 502
NNSKMDEIDKIIAEEGHVYDQKASFAQWLMYFGVGLIVALLPNFLYLSYMFGMSLSQHAGQIALVGVVCAALLAQGYNGIANEKKIQLLAKREVPRSGGGEARRALHKACAAEAGVFALAAGNATFLGLFLTSAFYLVPRVVSAAAPAPASHLLSCVGAAAALAWPR
Sbjct: 1 NNSKMDEIDKIIAEEGHVYDQKASFAQWLMYFGVGLIVALLPNFLYLSYMFGMSLSQHAGQIALVGVVCAALLAQGYNGIANEKKIQLLAKREVPRSGGGEARRALHKACAAEAGVFALAAGNATFLGLFLTSAFYLVPRVVSAAAPAPASHLLSCVGAAAALAWPR 167
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Stop | 0 |
Start | 1 |
Model size | 504 |
Hectar predicted targeting category | other localisation |
Exons | 6 |
Cds size | 489 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1681388057.563322-UTR-H-akashiwo_Contig953:305516..305529 | 1681388057.563322-UTR-H-akashiwo_Contig953:305516..305529 | Heterosigma akashiwo CCMP452 | UTR | H-akashiwo_Contig953 305517..305529 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1681388057.5748734-CDS-H-akashiwo_Contig953:305529..305599 | 1681388057.5748734-CDS-H-akashiwo_Contig953:305529..305599 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig953 305530..305599 + |
1681388057.5846736-CDS-H-akashiwo_Contig953:305796..305885 | 1681388057.5846736-CDS-H-akashiwo_Contig953:305796..305885 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig953 305797..305885 + |
1681388057.5950594-CDS-H-akashiwo_Contig953:306010..306114 | 1681388057.5950594-CDS-H-akashiwo_Contig953:306010..306114 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig953 306011..306114 + |
1681388057.605662-CDS-H-akashiwo_Contig953:306438..306544 | 1681388057.605662-CDS-H-akashiwo_Contig953:306438..306544 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig953 306439..306544 + |
1681388057.6169126-CDS-H-akashiwo_Contig953:312889..312972 | 1681388057.6169126-CDS-H-akashiwo_Contig953:312889..312972 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig953 312890..312972 + |
1681388057.6279008-CDS-H-akashiwo_Contig953:313143..313180 | 1681388057.6279008-CDS-H-akashiwo_Contig953:313143..313180 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig953 313144..313180 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig953.5.1 >prot_H-akashiwo_Contig953.5.1 ID=prot_H-akashiwo_Contig953.5.1|Name=mRNA_H-akashiwo_Contig953.5.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=163bp
MDEIDKIIAEEGHVYDQKASFAQWLMYFGVGLIVALLPNFLYLSYMFGMS LSQHAGQIALVGVVCAALLAQGYNGIANEKKIQLLAKREVPRSGGGEARR ALHKACAAEAGVFALAAGNATFLGLFLTSAFYLVPRVVSAAAPAPASHLL SCVGAAAALAWPR back to topmRNA from alignment at H-akashiwo_Contig953:305517..313180+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-akashiwo_Contig953.5.1 ID=mRNA_H-akashiwo_Contig953.5.1|Name=mRNA_H-akashiwo_Contig953.5.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=7664bp|location=Sequence derived from alignment at H-akashiwo_Contig953:305517..313180+ (Heterosigma akashiwo CCMP452) TAATAATTCAAAAATGGACGAGATTGATAAGATCATTGCCGAAGAAGGCC
ACGTGTACGACCAGAAGGCTTCTTTCGCTCAATGTAAGCCACGAAAGCTT
GCGAATCGTAGATTCTTCAGTTCGTCTCGTCATGAAGAAAATTCTTGTTT
CTTCTGTCTCCTTTTCCCAATGATGAAATACATGTTATTTCCTTTATATA
TCAAATCTTGGATCAAGCTAATTTCAATCTAACATAATATTTTTATGCGC
TTCAACTGGTGGTGTGTATGTCGGTGATAGGGCTGATGTACTTTGGTGTT
GGCCTGATTGTGGCCCTTCTCCCTAATTTCTTGTACCTTTCTTATATGTT
TGGGATGAGCTTGTCTCAGGTAAACCATACAAATGTATACGTGGTCACCC
AATACAGATTCTATTTGTCATATTTTCGCCATTCATTCAATTTTAATCAT
AATGTTGAAACAGATATCAAGTATTCCTGTGCTTTTATTGACAGCATGCC
GGTCAAATTGCTCTAGTGGGAGTTGTTTGTGCAGCTCTGCTTGCCCAAGG
TTACAATGGGATTGCCAATGAGAAGAAGATCCAACTTCTGGCGAAGAGGT
TTGTTGACTTTTGGAAATAGATCGCGGGTAATCCATGCAGCAGCCAAGAT
AACCATTTCATGTGCGCTTGATGCCAAACCTTTTTGCTGACAGTACATGA
TTCCAGAATCGCCACAACATTGAATTCGCCAGAGCAGGTTGGCTTAAGAT
AATCAAGCAAGAAGAGCTCTTGGCGAAGATTATTGGCCCATCCTCTTTGC
GAACAAGTAATTGACTTCCACAACTCACTTCCTTCCATAGACCAACTGGT
GGCCATCGTCTAATCTGCTGTCTCCGCCCAAACGCAGGCCTCGCACAAGA
ACAAGTTCCGCCGCCGCCACAGGGAGGTCCCGCGCTCTGGCGGCGGAGAG
GCGCGGCGGGCGCTGCACAAAGCCTGTGCTGCGGAGGCGGGCGTGTTCGC
GCTTGCTGCTGGCAACGCCACGTTTCTGGTGGGCCAGCGTTGGCTGCTGG
AGCTGGCTGATATGGGGGCGGACACAGCAGAACCCACACAGCTGATTTGC
CAGTGGTGGTCGTTGGGTCAACAGGGGGGGGGTAGGGTTGTTCTTTTGTG
CCACCTCTTCGCTTCAGAGGGGGCGGATTGTGGGTGGGTATATACTGTAG
TTAAAGCCAATGGTAGGGCTTTCAGATTATTTAGTCAACCTTGATTGGTT
TATGATTTCTTCTTCTTCTTTATCATGAGGAGAAAAAGATGATTCTGGGG
AGAAGTTATTTTCCTCTTATGCTTGGCTGCTGCTTCTCCTTAGTATAGCA
CAACAAAGATATATTCGGAGCATCACCCCAGCAGCAGTAGAAAACAACCA
CTGATAATGAACATCCAATAAAGCTACTTTGATCAAACCAGGCGTCACGC
CTTTCTTCCGCCCTCAGGGCCTAAGCTGCCACTATGGCACAAGTAGAATA
GTATAGAACTAGGGACTAGGATATTTGTAGACTTGAATGGTCACTTGCAT
GACCCATGATTGGTGATGGGCACACGTTGACTGCACCGAATCCTCTGTGA
AACGAGATTTCTTCTCTGCGGAAAAGCGGCAGCTCTTCTGTAAAATTTTT
GAAAACGATACCCCTCTCTCGGCGAGCTTCTTTTCTTCCATCCAACAGTT
TCGACAAATGGTGGACAAAAGTTCTCAGCAAACTTGACGACCTCCTTGCA
ACAGCAAGCGGTCAAGAGGACAATCATCAGCAGTATTGTGGCCAGCGGCA
CAATTCGAAATAGCAACGACAATGGCAAAAGCGGCATTTTTATCCTTCTT
CGAAATGGCAACGACAATGGCAACAGCAGGAAGCGTTAATGGGCAAACGG
CAATTTCGCACAAATGAGGAAGCATAGCATAGCGAGCAACTCCTCTTTCC
AACTGTATAGTCGGTGTCAGGCTTAAGGGGGCATCGCTCCATGGGAACTT
CGGCCAAATCGTTGACGCGGGCGCGAGCCGAGACTCGAACCCGGACCGCA
ACTAAAAAGCAAGTCATGCGCGCTACTCACTAAGCAATTCGCGCTTGTAC
TTCGATCAACGATTTAAAACATATGACGTTCAACCAAAAAAATCTAAACA
GTAGCTCAGATTGTAGCCTGCATAGAAGGCTATAATTTGAGACATTCACC
CGGATTTTCCCACACGTAGAACGTGTTTTTTTTCTCGGGGGATTTGGCCA
TATTCTTGTATACTTTAGCCTGACACCGACTGTATAGCTGCACAACTTCA
AAACAAGCACTCCAGACCTGCTACATCTGATTCAAGGCATGACCTGGGCT
TCAAAAGACTTTGTAGTCGGCCCTAAAACAACCCCTTCAGGGTCCGTCCT
AACGCTTGACGAACTTGACGGCGTCAAGCGATTTTCGATTTCGTCAACTT
GGCGACCATTTCGTCAAGCCGAGCTTGTCAAGCAGCACACACTTTTGTCA
ACCATCATCAAGGACCGTCGTCAAGTGCATTTTTGTTTCGTCAACTGAAG
CCGCAACAAATGCGGGGGGGAAATAAAAAAGAATAAACACGATAACGATA
AACCAATCAGTTTAATTTTTGGGGTCCTGTTATTATTGTCCTTCATTCTC
AATTCTTTTTCTGCTTCTTCGATTCTGTATCTTTCTCTGCGCAGCAACAC
GCACGCCACCTCAGCACCACAACCAGGAGCAGCAGCAGCAGCAGCAGCAG
CACCACCACCACCACAACCAGACTCGCAGCCCACCCACCACCACCAAAAG
AAGAACGAAAAAACGCAACAAAACAAATTCAAATTTTCAGCTTATAAATC
TCGATACCATATTTCTTTTCAATTCAACTTTCAAGAATTAGGGACCTAGT
TCGATATACTCACTGCTACAATGGGAGGTATACAGTTCAGTGGGGGGGGC
GACGCTGCGGGGGGGGGGATAAAAAGAAGAAGATCAAAAAAATCTCGTCA
AGCTTAGTGAAATTTCGTCAAGTGGGCTCGTCAAGTCGATTTTGATTTCG
TCAAGTTGGGCCGAAAAAATCTCGTCAAGCTCAAAAAAATCTTAGGATGG
GGTCTGCCATTAGTCTTGCCCAAGCCTGGACAAGATTTGAGTATGTAAGT
ATCAGTAATCTTTGTGCTGATAAGACATACACTGGAGTCAGTCAACTTCA
CACCTTCCGAGGAATGGGGGGAGCATTCTGATATTCCTCGCAAGTACCAT
GCTGTATTGCAGATTAAAGTGAAGTTTCCGTTTGTTACCTAACTGACAAG
AGACTGCAGTATTATTGGCAACTGCACTATCAACTTGGTTTCGGTTCACA
AGCGAAGTGATCAAAGATACATAGAGCAAAGACCAATGGGACATTTGAAT
TCAGCGATAACGGCCAACTTGTTATTTCTCCACTGATGGTCTCTCACCCA
AGGTTCATATATACTGTACTGTAGTTAAAGCCAATGGTAGGGCTTTTAGA
TTATTGAGTCAACCTTGGTTGGTTTATCATTTTTTCTTCTTCTTTATTAT
GAGGAGAAAAAAATGATTCTGGTGGGGAGAAGTTATTTTCCTCTTATATG
CTTGGCTGCTGCTTCCCCTTAGTTAGTATAGCACAACATAGATATATATT
CGGAGCATCACCCCAGCAGCAGTAGAAAACAACCACTGACAATGAACATC
CAATAAAGCTACTTTGATCAAACCAGGCGTCACGCCTTTCTTCCGCCCTC
AGGGCCTAAGCTGCCACTATGGCAAGTAGAATAGTATAGAACTAGGGACA
AGGATATTTGTAGACTTGAATGGTCACTTGCATGACCCATGATTGTCCAA
TAGATACAGCAGCCCAAACGGTGTTGTCAGCATCGCTAATCCCGCAACCG
CACAAACAGTCTTCGCAGTGTATAGTTGCCAACGCTCCAAGGTTGATATC
ATGAGGTCACGGGTGCAATCCCGGCCTTCTGTTTTCGCGGACAAATGCAA
CACGTAATCAGCACTGTGCTTCTTCACGAACAAAGTTGTAATGAACTGTG
TCCTGTGCGCGATTGCAATTGAAGCTCGTGTTCGCATCAAAGGACGGGGG
AAATGTTGTCGTGTGGGCATTGCGGGGATTTTTAAAACAGAAACGAAGGC
CTCGGACGAACGCACAGCCATTTTTTACCCAAGAGAGTCTGTGTTTTGTA
TCCAAAGTTCTGGATGTAGACCCTCACGATCAAAACCCAAGACAAATTTC
TTGCGTCCAAATTCCTCGTTTGAACACAAAAAAAAGGCCGAAAATGATCG
CACTTTTCTGCAAATCCACGTCCATGTCCGTCCAAAAAAAAACGCAACGC
AGCATTCGATAATGCTGTTCTTTTTCCTTTTGTTTTTGTCCAATCAGAAT
TTCCAGAATTCTGAATCAATATCCAATCAGCAATCAGTCGGTGTCAGGCC
TCTATGGGAAATTCGGCCAAATTTTTCACGCCGAGACTCGAACCCGGATC
AGAAGTAAAAAACGAGTCACGCGCTCTAGCCATATGGCAATTTGGACTTG
TACTACCTCCAACGATTTAAAATCTATGACCTTCAACCAAAAATTCTAAA
ACTGCCTCCTCGTCTAATATATATATCGCAACAAGTTCGTTGCAGACTGC
ATTTTGAGCTATTTTCCCGGATTTTCCGACACGTACAACGCGCTTTTTTT
TCTCAGGGGATTTGGCCAAATTCTTGCATACTTTAGCCTGACACCGACTC
ATTGTGAACGGGAACTGCATTTGTCATTCAAAACTCTCCACTTCTGTCCT
CCGACCGGTGCTGATGATGGCGGCCGCGGGTGACTGAGCCTCGAGGTCTG
CAAAGCAAACGTGCAGATCAGCAGGCTCAAATGAGACCTGCAGGGGGGAA
CATTTCTCTGACAGAGCTTGCCGCATTTTCCCTCTACAGGCCTCGAGGTC
CGCAGTGCAAATATGCGGATTCAACAGGCTCAACCTAGACCCGCAGGGTG
TGGGAATATTGATTCTGACAGAGGAGCCTAACACCACAATATTTTCACCA
TGCGGGTCTTGAGACCCGCGGGGTTATAGCAGGGTGATAATGTTGGCCCT
GAAATGACCCGACGCTGTCATATTTTCACCCTGCGGGCCTCAAGGTCCGC
AGGCCAAATATGTGGATTCAGAAGGCTGATTTGAGACGCGCAAGGTTACA
ATGTTGACCCTAACTGAGCATTCAACCCGAATATTTTCCCCCTGCGGGAT
TCGAGACCCGCAGAGGGCAAATGTGCGGATTTATAAGGCTAATCTGAAAC
CCGCAGGGTAAACCATTTTTGCATCAACAACTGAGCTGGCCGACCCCGCA
TAAAATACATGCCGAGCCTCGAGGGCTGCAACGGAAATATGTGAATACAG
TGACGCTATCTGAAATGGACAAGATTTCATTTTTAATCTATCCAATCTGA
AACAATCAATGAACTTTTCTGATTGGCGCTAGGTAGGAGCGTTTATACAC
TTGCACAAATATTTTTCCAGAATGTTCGCCATTCTGGATCGGGTTTGCGT
TTGTCTTTGGAATTTGAAACTCCCGACGTGTTGGACGAACGAATTCAGCA
CCTACTTGGTTCGTCGAAGGCCTTCGTTTGTCATTTAAAAATCCCCGTAT
TGCTAATTCCGCAAGTCTGCAAACAGTCTTATAGCAGTACAGTTGTCAAC
GCCCTAAGGTTGGTGTACCATGAGTCGCGAGTTCAATCCCAGCCTTCTGT
TTCCGCGGGGAAAATGCAGCAAACATTTTGTGAAAAGCTTACCATAGTTT
TTTTTTTTTTCTACATTCTAACTTGCAATGTGCTCCTCTCACACTCTGAG
CCACAAGCACTGTCTTCCTGCAGGCCGCTTTGACATCTGAACAATTCGTC
GGACAGCGCGTCGCTACTGACTGGCCCTGGAGCCCCAGCTGCACGAAGTC
CTACATGTTCTACTGCCCCGTGGCCTCACCGCAGTCCAGTTCTCTTCCGT
GGACGCTTCTTCCGACAACTCACGTCCATCGACGGGTGCTTCTTCTCCTT
CCGCAGGTCGGGATGGTTCCCCCCCCAGGGTACATCCACCCCTCGTTTCG
GAGCACGAGTGCTCCTTCCTAGGCCGTTTTTGTGATTTGTACGAGCTATA
TGGAAGTAACTTCCATAAACCGGCCTCGTGAACAGTAAGTACATAGTGCT
CGTGTTTCAATGCATGCCACTTGCATGGATCATCGACGGCCCACCGCTAA
CGCGAGGACATTCCGCGCAGCCCTCAGCGAATTTCTGAAGAACTCTCACA
AGTTTGTCGCAAGTTCCGAACCAGTCCCGAAGAATTTTCACTGAGTCAAC
GCCGGCCAGCGATAGACCTAGTATCACCACCCACACCAGAGAACATGAAC
ACCGAAAGTGCCTGTCAATGCTCAAGAGCGAAGGCCAAAGCCTGGTTTTG
TTTTTGTGTGCTAACGTGTTTTAGCGGACTTATTGATTGTGATTGGTTGC
TAATACAACCGGAAGTGTGTGCACTTGTGCTGTAATAGTAGGAGTCGTGG
GGTGAACCTTCATTCTTCATTCAATAGTACATAACCCGGAATAGCTCAAT
AGTTCGAAGGTTCGACTTCGAAGCATCAAGTGGCAGGATCGGATCCCGTC
ATGTCAAGTTGGTGACAGTTGGATGTGCGCGCGATAGGTTCGCCGAACGA
TGCTTGGTCGAGAACACGATCAATTGAAGCGATTAGCGGGGAATGTCGAC
GTGAGACAAGAATGAACACGGACCAGGCGGCCCTAGACCCGGATAAGCGC
CACGCCTGACGGAATTATCCCGCAAGTATCGACCGGTGCGATCTCGGCAC
AGCCGCGAAAGTAACACCGGTCAAAGATATGGGGACTGACCGGCACCATG
AAGAGCATGAAGCATGGTGTGTACTATGTAGACAAAAAAAAAAAAAAAAA
AAAAACATACTTCTTATTCTTTTAACAATCTCTGGACTGTAGCAGCAGCA
GAAGGAACAAGTTTTTTTTTTTTAACAATCTCCAGATCTACTATCCAGCA
AAACTAAGGATCAAGCAACCAGCCTCGGCTGGCGGTGGCCTGCTATTGGC
CGAAATTATTGAGTATTTTGCGGCGATGGCCTGGTGCACTGTAGTGTAGC
TAATTTTTATGAGCCTTTTGTAATAATAATCTTTAACCTGCTGTTTCAGT
AATGGCGGTGGATTCACTTGAAATAGGGCTGGATGTGTTTTCCGTTAAGC
CCTTAATGATTCAGTAGTCATGTAAAACAACAACACAATGCAAGTGTCGC
CCAAGTCTCCGTTGGGGGGAAACGGGTAACACAACACAACTCCGCCTTGC
CTCCGCGCTCTCCCTCCCCCCAGGGTCTGTTCCTGACCTCCGCCTTCTAC
CTGGTGCCCCGGGTGGTCTCGGCGGCGGCGCCGGCCCCCGCCTCGCACCT
GCTGAGGTGAGCTGGGACCAGGCCGTCCCATCTGCGATTCGAACGTGTTT
TCCTGGCGAGTGTGTTTCGGTCGCCAAGGTCCCCCGCGTGGGGATAACGG
GCAACGGCCCGAGCTCTGTGTTTCCTCCCTCGCCCCGCGCCGAAGCCGTG
GCCCGCCCCCCGCCCGCCGCCCCGCAGCTGCGTGGGCGCCGCCGCCGCGC
TGGCCTGGCCGCGC back to topCoding sequence (CDS) from alignment at H-akashiwo_Contig953:305517..313180+ >mRNA_H-akashiwo_Contig953.5.1 ID=mRNA_H-akashiwo_Contig953.5.1|Name=mRNA_H-akashiwo_Contig953.5.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=489bp|location=Sequence derived from alignment at H-akashiwo_Contig953:305517..313180+ (Heterosigma akashiwo CCMP452) ATGGACGAGATTGATAAGATCATTGCCGAAGAAGGCCACGTGTACGACCA GAAGGCTTCTTTCGCTCAATGGCTGATGTACTTTGGTGTTGGCCTGATTG TGGCCCTTCTCCCTAATTTCTTGTACCTTTCTTATATGTTTGGGATGAGC TTGTCTCAGCATGCCGGTCAAATTGCTCTAGTGGGAGTTGTTTGTGCAGC TCTGCTTGCCCAAGGTTACAATGGGATTGCCAATGAGAAGAAGATCCAAC TTCTGGCGAAGAGGGAGGTCCCGCGCTCTGGCGGCGGAGAGGCGCGGCGG GCGCTGCACAAAGCCTGTGCTGCGGAGGCGGGCGTGTTCGCGCTTGCTGC TGGCAACGCCACGTTTCTGGGTCTGTTCCTGACCTCCGCCTTCTACCTGG TGCCCCGGGTGGTCTCGGCGGCGGCGCCGGCCCCCGCCTCGCACCTGCTG AGCTGCGTGGGCGCCGCCGCCGCGCTGGCCTGGCCGCGC back to top
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