mRNA_H-akashiwo_Contig925.4.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig925.4.1 vs. uniprot
Match: A0A7S4DD78_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD78_HETAK) HSP 1 Score: 626 bits (1615), Expect = 9.900e-225 Identity = 301/341 (88.27%), Postives = 326/341 (95.60%), Query Frame = 1 Query: 160 MELHDHLLSLGFQRSGHESCLYIRREGGRELMVAVYVDDLVVSGSSPALVSDFKRSLASKYDLTDQGELTQILGIKVVRDKRNKCFYLSQTSFIKDALSKFGLDYLPACATPMDHTVDLTPTPGFKAELSDANMYRSMVGTLAWVANWTRPELAFTVHKLQRTQCNPEAKHFEAAEIAFRYLKGTQSESLRLGGDLLLRAFSDSDFCSDRIDGKSVTGYVLFLGDAPILWSSKLQGAVTTSTVEAEYLALRSSVKDIMWLRHLLADLGCPQQEPTPVVEDNSACIEWANDLLVSKKNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADIFTKALNAENFD 1182 MELHDHL SLGF+RSGHESCLYI R+GG ELMVAVYVDDLV+SGSS A+VS+FK+SLASKY LTDQGELTQILGIKVVRDKRNKCF+LSQTSFIKDAL+KFGLDYLPAC TP+DHTVDLTPTPGFKAELSDAN+YRSMVGTLAWVANWTRPELAFTVHKLQRTQ NPE KHFEA + AFRYLKGTQSESLRLGGDL+LRAFSDSDFC+DR+DGKSVTGY+LFLGDAPI+WSSKLQGAVTTSTVEAEYLALRS+VKDIMWLR LL ++GCPQ EPTPVVEDNSAC+EWAND+LV+K+NRHFHVSYHLAKEQVSLGTIRMF+IKTHDQVADI TKALNA NF+ Sbjct: 1 MELHDHLESLGFKRSGHESCLYIHRDGGNELMVAVYVDDLVISGSSQAVVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLEEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKALNAANFE 341
BLAST of mRNA_H-akashiwo_Contig925.4.1 vs. uniprot
Match: A0A7S3Y6S2_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6S2_HETAK) HSP 1 Score: 432 bits (1110), Expect = 3.010e-149 Identity = 204/235 (86.81%), Postives = 224/235 (95.32%), Query Frame = 1 Query: 1 DSLDISTAFLNGDMTEDVYVKQPPGFVDPEHPDRVWKLNKALYGLRQSPRIWYMELHDHLLSLGFQRSGHESCLYIRREGGRELMVAVYVDDLVVSGSSPALVSDFKRSLASKYDLTDQGELTQILGIKVVRDKRNKCFYLSQTSFIKDALSKFGLDYLPACATPMDHTVDLTPTPGFKAELSDANMYRSMVGTLAWVANWTRPELAFTVHKLQRTQCNPEAKHFEAAEIAFRYL 705 DSLDISTAFLNG MT+DVYV+QPP +VDP+HP++VWKLNKALYGL+QSPR+WYMELHDHL SLGF+RSGHESCLYI R+GG ELMVAVYVDDLV+SGSS A+VS+FK+SLASKY+LTDQGELTQILGIKVVRDKRNKCF+LSQTSFIKDAL+KFGLDYLPAC TP+DHTVDLTPTPGFKAELSDAN+YRSMVGTLAWVANWTRPELAFTVHKLQRTQ NPE KHFEA + AFRYL Sbjct: 34 DSLDISTAFLNGAMTDDVYVRQPPSYVDPQHPNKVWKLNKALYGLKQSPRVWYMELHDHLESLGFKRSGHESCLYIHRDGGNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPIDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYL 268
BLAST of mRNA_H-akashiwo_Contig925.4.1 vs. uniprot
Match: A0A7S3Y1P1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1P1_HETAK) HSP 1 Score: 342 bits (876), Expect = 3.310e-105 Identity = 172/394 (43.65%), Postives = 257/394 (65.23%), Query Frame = 1 Query: 7 LDISTAFLNGDMTEDVYVKQPPGFVDPEHPDRVWKLNKALYGLRQSPRIWYMELHDHLLSLGFQRSGHESCLY--IRREGGRELMVAVYVDDLVVSGSSPALVSDFKRSLASKYDLTDQGELTQILGIKVVRDKRNKCFYLSQTSFIKDALSKFGLDYLPACATPMDHTVDLTPTPGFKAELS--DANMYRSMVGTLAWVANWTRPELAFTVHKLQRTQCNPEAKHFEAAEIAFRYLKGTQSESLRLGGDLLLRAFSDSDFCSDRIDGKSVTGYVLFLGDAPILWSSKLQGAVTTSTVEAEYLALRSSVKDIMWLRHLLADLGCPQQEPTPVVEDNSACIEWANDLLVSKKNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADIFTKALNAEN 1176 +DI TAFL+G + ED+Y+KQP G+ P +V KL K+LYGL+Q+P+ WY L+ LL G+ R+G++SC+Y + GG+ L ++VYVDD+V++ S + +S K++++ Y+++D GE+ ILGIKV RD+ + LSQ SFI++A KF + P++ +D+ LS +A +RS+VGT+ W+A WT PE+A+++H L + +P A A+ RYL T+ + + LGG L L A++D+DFCS+R G+S +G+ +FLG +PI+WSS++Q VT +T EAEY++LR++V D+MWL+ LL LG +Q P+ EDN ACI WAND VSK RH HVSYH KE V I + ++ T Q+AD+FTK L+ N Sbjct: 594 MDIKTAFLHGKLEEDIYMKQPEGYEVPGMEHKVLKLKKSLYGLKQAPKCWYQNLNGFLLQQGYTRNGYDSCVYSKVSSTGGKTL-ISVYVDDIVLASSDKSELSRIKKAISLGYNVSDMGEIESILGIKVQRDRTARTITLSQHSFIEEACEKFQVRSYEPVTNPVNKGIDVNINTDTSRRLSTFEAKKFRSLVGTVNWLALWTFPEVAYSIHTLSKRFTSPSANCLAASYHLLRYLWWTEDKGVTLGGPLNLTAYADADFCSERHKGRSRSGFAIFLGFSPIIWSSRMQHCVTRNTTEAEYVSLRNAVTDVMWLKRLLESLGY-KQGCVPIYEDNKACITWANDETVSKSARHIHVSYHYTKEMVQSKEIEVKYVDTKHQIADVFTKPLDFNN 985
BLAST of mRNA_H-akashiwo_Contig925.4.1 vs. uniprot
Match: A0A2N9GBV9_FAGSY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GBV9_FAGSY) HSP 1 Score: 278 bits (710), Expect = 8.150e-85 Identity = 146/393 (37.15%), Postives = 228/393 (58.02%), Query Frame = 1 Query: 7 LDISTAFLNGDMTEDVYVKQPPGFVDPEHPDRVWKLNKALYGLRQSPRIWYMELHDHLLSLGFQRSGHESCLYIRREGGRELMVAVYVDDLVVSGSSPALVSDFKRSLASKYDLTDQGELTQILGIKVVRDKRNKCFYLSQTSFIKDALSKFGLDYLPACATPMDHTVDLTPTPGFKAELSDANMYRSMVGTLAWVANWTRPELAFTVHKLQRTQCNPEAKHFEAAEIAFRYLKGTQSESLRLGGD--LLLRAFSDSDFCSDRIDGKSVTGYVLFLGDAPILWSSKLQGAVTTSTVEAEYLALRSSVKDIMWLRHLLADLGCPQQEPTPVVEDNSACIEWANDLLVSKKNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADIFTKALNAENF 1179 +D+ AFLNGD+TE+VY++ PPG+ D +PD+V L +ALYGL+Q+PR W+ + + GF S H++ L+IRR +++ +YVDD++++G + +SDFK L ++++ D G L+ LG++V D +YLSQ + D LS+ GL +TP++ LTP G LSDA +YR +VG+L ++ TRP++A VH + + P + H+ A RY+KGT L L L A+SD+D+ D D +S TG+ FLGD+ I W SK Q V+ S+ EAEY AL + +++ LR LL D+G PT + DN + I+ A++ + ++ +H + HL + +S G + + + + DQ ADIFTK F Sbjct: 166 MDVKNAFLNGDLTEEVYMQAPPGYSD--YPDKVCLLRRALYGLKQAPRAWFAKFSSIVHQFGFSSSSHDTTLFIRRSDKGMILLLLYVDDMIITGDDHSGISDFKLFLHQQFEMKDLGHLSYFLGLEVSSDSTG--YYLSQAKYASDLLSRAGLTDTKVVSTPLEMNARLTPLDG--TPLSDATLYRQLVGSLVYLTV-TRPDIAHAVHLVSQFLSAPHSTHYAAVLHILRYIKGTMFHGLHFSAHSTLDLCAYSDADWAGDPTDRRSTTGFCFFLGDSLISWRSKKQHIVSRSSTEAEYRALADTTSELLALRWLLEDMGVTHSSPTVIHCDNRSAIQIAHNDVFHERTKHIEIDCHLVRHHLSAGILHLLPVSSSDQTADIFTKTFPPGRF 551
BLAST of mRNA_H-akashiwo_Contig925.4.1 vs. uniprot
Match: A0A2N9GDZ1_FAGSY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GDZ1_FAGSY) HSP 1 Score: 276 bits (706), Expect = 8.540e-85 Identity = 146/393 (37.15%), Postives = 227/393 (57.76%), Query Frame = 1 Query: 7 LDISTAFLNGDMTEDVYVKQPPGFVDPEHPDRVWKLNKALYGLRQSPRIWYMELHDHLLSLGFQRSGHESCLYIRREGGRELMVAVYVDDLVVSGSSPALVSDFKRSLASKYDLTDQGELTQILGIKVVRDKRNKCFYLSQTSFIKDALSKFGLDYLPACATPMDHTVDLTPTPGFKAELSDANMYRSMVGTLAWVANWTRPELAFTVHKLQRTQCNPEAKHFEAAEIAFRYLKGTQSESLRLGGD--LLLRAFSDSDFCSDRIDGKSVTGYVLFLGDAPILWSSKLQGAVTTSTVEAEYLALRSSVKDIMWLRHLLADLGCPQQEPTPVVEDNSACIEWANDLLVSKKNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADIFTKALNAENF 1179 +D+ AFLNGD+TE+VY++ PPG+ D PD+V L +ALYGL+Q+PR W+ + + GF S H++ L+IRR +++ +YVDD++++G + +SDFK L ++++ D G L+ LG++V D +YLSQ + D LS+ GL +TP++ LTP G LSDA +YR +VG+L ++ TRP++A VH + + P + H+ A RY+KGT L L L A+SD+D+ D D +S TG+ FLGD+ I W SK Q V+ S+ EAEY AL + +++ LR LL D+G PT + DN + I+ A++ + ++ +H + HL + +S G + + + + DQ ADIFTK F Sbjct: 115 MDVKNAFLNGDLTEEVYMQAPPGYSD--CPDKVCLLRRALYGLKQAPRAWFAKFSSIVHQFGFSSSSHDTALFIRRSDKGMILLLLYVDDMIITGDDHSGISDFKLFLHQQFEMKDLGHLSYFLGLEVSSDSTG--YYLSQAKYASDLLSRAGLTDTKVVSTPLEMNARLTPLDG--TPLSDATLYRQLVGSLVYLTV-TRPDIAHAVHLVSQFLSAPHSTHYAAVLHILRYIKGTMFHGLHFSAHSTLDLCAYSDADWAGDPTDRRSTTGFCFFLGDSLISWRSKKQHIVSRSSTEAEYRALADTTSELLALRWLLEDMGVTHSSPTVIHCDNRSAIQIAHNDVFHERTKHIEIDCHLVRHHLSAGILHLLPVSSSDQTADIFTKTFPPGRF 500
BLAST of mRNA_H-akashiwo_Contig925.4.1 vs. uniprot
Match: A0A314KJ27_NICAT (Retrovirus-related pol polyprotein from transposon tnt 1-94 (Fragment) n=1 Tax=Nicotiana attenuata TaxID=49451 RepID=A0A314KJ27_NICAT) HSP 1 Score: 271 bits (692), Expect = 3.790e-84 Identity = 145/394 (36.80%), Postives = 231/394 (58.63%), Query Frame = 1 Query: 7 LDISTAFLNGDMTEDVYVKQPPGFVDPEHPDRVWKLNKALYGLRQSPRIWYMELHDHLLSLGFQRSGHESCLYIRREGGRELMVAVYVDDLVVSGSSPALVSDFKRSLASKYDLTDQGELTQILGIKVVRDKRNKCFYLSQTSFIKDALSKFGLDYLPACATPMDHTVDLTPTPGFKAELSDANMYRSMVGTLAWVANWTRPELAFTVHKLQRTQCNPEAKHFEAAEIAFRYLKGTQSESLRL--GGDLLLRAFSDSDFCSDRIDGKSVTGYVLFLGDAPILWSSKLQGAVTTSTVEAEYLALRSSVKDIMWLRHLLADLGCPQQEPTPVVEDNSACIEWANDLLVSKKNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADIFTKALNAENFD 1182 +D+ +AFLNG + E++YV+QP GFV D+V++L+KALYGL+Q+PR WY + D+LL L F++S ES LY+++ G L+V++YVDDL+++GSS L+ DFK+ + +++TD G +T LG+++ +K ++ Q + K+ L KFG++ A TPM+ L G AE D + +RS++G L ++ TRP++ + V L R P H +AA+ RY+KGT + ++ ++ L +SDSD+ D KS +GY LG W SK Q V ST +AE++A ++V +WLR +L DL ++ T V DN A I +++ + K +HF++ +E G I + + KT ++VADIF K L F+ Sbjct: 1 MDVKSAFLNGILKEEIYVEQPEGFVVEGKEDKVYRLHKALYGLKQAPRAWYSRIDDYLLGLNFEKSLSESTLYVKQHSGDILVVSLYVDDLLITGSSTKLIDDFKQDMMQAFEMTDLGLVTYFLGMEIKPEKDE--VFICQNKYAKEILKKFGMENCKAMNTPMNQKEKLRKDDG--AEKVDESYFRSIIGCLMYLTA-TRPDILYAVSVLSRFMHCPSEVHLKAAKRVVRYIKGTINYGVKFHRSRNMELFGYSDSDWGGSLDDMKSTSGYCFSLGSRMFSWCSKKQDTVAQSTAQAEFVAATAAVNQALWLREILVDLHMEPRKSTEVFVDNQAAIAISHNPVFHGKTKHFNIKLFFLREVQKDGAITLVYCKTEEEVADIFKKPLPVSKFE 389
BLAST of mRNA_H-akashiwo_Contig925.4.1 vs. uniprot
Match: A0A2N9J2W0_FAGSY (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9J2W0_FAGSY) HSP 1 Score: 273 bits (697), Expect = 4.070e-84 Identity = 144/393 (36.64%), Postives = 226/393 (57.51%), Query Frame = 1 Query: 7 LDISTAFLNGDMTEDVYVKQPPGFVDPEHPDRVWKLNKALYGLRQSPRIWYMELHDHLLSLGFQRSGHESCLYIRREGGRELMVAVYVDDLVVSGSSPALVSDFKRSLASKYDLTDQGELTQILGIKVVRDKRNKCFYLSQTSFIKDALSKFGLDYLPACATPMDHTVDLTPTPGFKAELSDANMYRSMVGTLAWVANWTRPELAFTVHKLQRTQCNPEAKHFEAAEIAFRYLKGTQSESLRLGGD--LLLRAFSDSDFCSDRIDGKSVTGYVLFLGDAPILWSSKLQGAVTTSTVEAEYLALRSSVKDIMWLRHLLADLGCPQQEPTPVVEDNSACIEWANDLLVSKKNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADIFTKALNAENF 1179 +D+ AFLNGD+TE+VY++ PPG+ D PD+V L +ALYGL+Q+PR W+ + + GF S H++ L+IRR +++ +YVDD++++G + +SDFK L ++++ D G L+ LG++V D +YLSQ + D LS+ GL +TP++ LTP G L DA +YR +VG+L ++ TRP++A VH + + P + H+ A RY+KGT L L L A+SD+D+ D + +S TG+ FLGD+ I W SK Q V+ S+ EAEY AL + +++ LR LL D+G PT + DN + I+ A++ + ++ +H + HL + +S G + + + + DQ ADIFTK F Sbjct: 59 MDVKNAFLNGDLTEEVYMQAPPGYSD--CPDKVCLLRRALYGLKQAPRAWFAKFSSIVHQFGFSSSSHDTALFIRRSDKGMILLLLYVDDMIITGDDHSGISDFKLFLHQQFEMKDLGHLSYFLGLEVSSDSTG--YYLSQAKYASDLLSRAGLTDTKVVSTPLEMNARLTPLDG--TPLRDATLYRQLVGSLVYLTV-TRPDIAHAVHLVSQFLSAPHSTHYAAVLHILRYIKGTMFHGLHFSAHSTLNLCAYSDADWAGDPTNRRSTTGFCFFLGDSLISWRSKKQHIVSRSSTEAEYRALADTTSELLALRWLLEDMGVTHSSPTVIHCDNHSAIQIAHNDVFHERTKHIEIDCHLVRHHLSAGILHLLPVSSSDQTADIFTKTFPPGRF 444
BLAST of mRNA_H-akashiwo_Contig925.4.1 vs. uniprot
Match: A0A8J5YYQ4_9ROSI (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5YYQ4_9ROSI) HSP 1 Score: 272 bits (695), Expect = 4.210e-84 Identity = 150/394 (38.07%), Postives = 232/394 (58.88%), Query Frame = 1 Query: 7 LDISTAFLNGDMTEDVYVKQPPGFVDPEHPDRVWKLNKALYGLRQSPRIWYMELHDHLLSLGFQRSGHESCLYIRREGGR-ELMVAVYVDDLVVSGSSPALVSDFKRSLASKYDLTDQGELTQILGIKVVRDKRNKCFYLSQTSFIKDALSKFGLDYLPACATPMDHTVDLTPTPGFKAELSDANMYRSMVGTLAWVANWTRPELAFTVHKLQRTQCNPEAKHFEAAEIAFRYLKGTQSESLRLGG--DLLLRAFSDSDFCSDRIDGKSVTGYVLFLGDAPILWSSKLQGAVTTSTVEAEYLALRSSVKDIMWLRHLLADLGCPQQEPTPVVEDNSACIEWANDLLVSKKNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADIFTKALNAENF 1179 LD+ +AFLNG + E++Y+ QP GFV V+KL KALYGL+Q+PR WY + +LLSLGF+RS E LY++++ +L+V++YVDDL+V+G +++DFK + ++++D G++ LG++V + + +L Q +F LSKF ++ +TPM L+ G++ ++S+A+ YRS+VG L ++ TRP++ ++V L R +H +AA+ RY+KGT S L+ DL L ++DSD+ + D KS +GY LG A WSSK Q V ST EAEY+A +V +WLR +LADL Q+E T + DN + + A + + + +HF + H+ +E I + + DQVADIFTKAL F Sbjct: 30 LDVKSAFLNGFLEEEIYIDQPQGFVVSGKEQMVYKLKKALYGLKQAPRAWYTRIDSYLLSLGFERSISEPTLYVKKKQAETQLIVSLYVDDLLVTGGDRNMLADFKAKMKDTFEMSDLGQMIYFLGMEV--QQTHSGIFLGQKTFAAKILSKFSMENCKPTSTPMAVGAKLSGQEGYE-QVSEAD-YRSLVGCLLYLTA-TRPDIMYSVSVLSRFMHCCNKQHLQAAKRVLRYIKGTLSYGLKFSRNEDLKLIGYTDSDWAGSKDDMKSTSGYAFTLGSAMFCWSSKKQSIVAQSTAEAEYVAAAGAVNQAIWLRKILADLNLYQKEATEIFCDNKSAVAIAKNPIFHGRTKHFSIKLHVVREMEQAREIELVHCNSEDQVADIFTKALCTSRF 418
BLAST of mRNA_H-akashiwo_Contig925.4.1 vs. uniprot
Match: A0A151RPT4_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=5 Tax=Cajanus cajan TaxID=3821 RepID=A0A151RPT4_CAJCA) HSP 1 Score: 287 bits (735), Expect = 1.550e-83 Identity = 151/393 (38.42%), Postives = 234/393 (59.54%), Query Frame = 1 Query: 7 LDISTAFLNGDMTEDVYVKQPPGFVDPEHPDRVWKLNKALYGLRQSPRIWYMELHDHLLSLGFQRSGHESCLYIRREGGRELMVAVYVDDLVVSGSSPALVSDFKRSLASKYDLTDQGELTQILGIKVVRDKRNKCFYLSQTSFIKDALSKFGLDYLPACATPMDHTVDLTPTPGFKAELSDANMYRSMVGTLAWVANWTRPELAFTVHKLQRTQCNPEAKHFEAAEIAFRYLKGTQSESLRLGG--DLLLRAFSDSDFCSDRIDGKSVTGYVLFLGDAPILWSSKLQGAVTTSTVEAEYLALRSSVKDIMWLRHLLADLGCPQQEPTPVVEDNSACIEWANDLLVSKKNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADIFTKALNAENF 1179 +D+ +AFLNG + E+VY++QP G+ D+V +L KALYGL+Q+PR W + + + + F + +E LYI+ +G L+V +YVDDL+ +G++P++ +FK+ + ++++TD G + LGI+V + N+ +++Q S+ KD L KF LD TPM+ + L+ + E D +Y+S+VG+L ++ TRP++ + V + R P H + A+ RY+KGT S L D L +SDSD+ D D KS +G+V ++GD W SK Q VT ST EAEY+A S V +WLR+LL +L PQ EPT + DN + I A + + +++H H YH +E +S ++M ++KTHDQVADIFTK L E F Sbjct: 942 MDVKSAFLNGVLEEEVYIEQPQGYEVKGEEDKVLRLKKALYGLKQAPRAWNVRIDKYFKEVNFIKCPYEHALYIKAQGKDILIVCLYVDDLIFTGNNPSMFEEFKKDMTKEFEMTDMGLMAYYLGIEVKQG--NEGIFITQESYAKDLLKKFKLDDANPVGTPMECGIKLSKDE--EGEKVDPTLYKSLVGSLRYLT-CTRPDILYAVGVVSRYMEAPTTTHLKTAKRILRYIKGTTSFGLYYSNSNDYKLVGYSDSDWSGDMDDRKSTSGFVFYMGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQVEPTKIYVDNKSAIALAKNPVFHDRSKHIHTRYHYIRECISNKDVQMEYVKTHDQVADIFTKPLKKEVF 1329
BLAST of mRNA_H-akashiwo_Contig925.4.1 vs. uniprot
Match: A0A2K3M5H6_TRIPR (Retrotransposon protein n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3M5H6_TRIPR) HSP 1 Score: 271 bits (694), Expect = 2.690e-83 Identity = 146/394 (37.06%), Postives = 232/394 (58.88%), Query Frame = 1 Query: 7 LDISTAFLNGDMTEDVYVKQPPGFVDPEHPDRVWKLNKALYGLRQSPRIWYMELHDHLLSLGFQRSGHESCLYIRREGGRELMVAVYVDDLVVSGSSPALVSDFKRSLASKYDLTDQGELTQILGIKVVRDKRNKCFYLSQTSFIKDALSKFGLDYLPACATPMDHTVDLTPTPGFKAELSDANMYRSMVGTLAWVANWTRPELAFTVHKLQRTQCNPEAKHFEAAEIAFRYLKGTQSESLRL--GGDLLLRAFSDSDFCSDRIDGKSVTGYVLFLGDAPILWSSKLQGAVTTSTVEAEYLALRSSVKDIMWLRHLLADLGCPQQEPTPVVEDNSACIEWANDLLVSKKNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADIFTKALNAENFD 1182 LD+ +AFLNG++ E+VYVKQP GF +V+KL+KALYGL+Q+PR W ++ + L GF +S E LY++R G LMV +YVDDL+ +G++P +V FK ++ +Y++TD G + LGI+V + K +++Q +I D L KF L+ +TPM L G AE +D +YRS+VG+L ++ N TRP++ +V + R P HF AA+ RYL+GT+ ++ D L ++DSD+ D KS + YV LG I WSSK Q +V S+ EAEY++ + ++ +WLR +L+DL ++PTP+ DN + I + + + +++H + ++ ++ V I + +IKT Q AD+ TKA++ E + Sbjct: 92 LDVKSAFLNGELEEEVYVKQPQGFEAKGKERKVYKLHKALYGLKQAPRAWNSKIDAYFLQNGFVKSPSEPSLYVKRNGANFLMVCLYVDDLIYAGTNPNMVQSFKEAMMKEYEMTDLGLMKYFLGIQVKQTKGE--IFITQEKYIHDLLKKFRLESCKPVSTPMAMNEKLQLNDG--AEQADPKVYRSLVGSLIYLTN-TRPDIVHSVSLVSRFMNEPSKLHFAAAKRILRYLQGTKKLGIKYVKEEDNKLVGYTDSDWAGSFDDRKSTSAYVFCLGSKAISWSSKKQNSVALSSAEAEYISANEATREAVWLRRILSDLQQKVEDPTPIFCDNQSAISMSKNPVFHGRSKHIELRHNYIRDMVQKKEIYLEYIKTTKQPADVLTKAVSLEKLE 480 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig925.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig925.4.1 >prot_H-akashiwo_Contig925.4.1 ID=prot_H-akashiwo_Contig925.4.1|Name=mRNA_H-akashiwo_Contig925.4.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=394bp DSLDISTAFLNGDMTEDVYVKQPPGFVDPEHPDRVWKLNKALYGLRQSPRback to top mRNA from alignment at H-akashiwo_Contig925:245712..246893+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig925.4.1 ID=mRNA_H-akashiwo_Contig925.4.1|Name=mRNA_H-akashiwo_Contig925.4.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1182bp|location=Sequence derived from alignment at H-akashiwo_Contig925:245712..246893+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig925:245712..246893+ >mRNA_H-akashiwo_Contig925.4.1 ID=mRNA_H-akashiwo_Contig925.4.1|Name=mRNA_H-akashiwo_Contig925.4.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=1182bp|location=Sequence derived from alignment at H-akashiwo_Contig925:245712..246893+ (Heterosigma akashiwo CCMP452)back to top |