mRNA_H-akashiwo_Contig810.3.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig810.3.1 vs. uniprot
Match: A0A7S4DD78_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD78_HETAK) HSP 1 Score: 226 bits (575), Expect = 5.030e-71 Identity = 106/142 (74.65%), Postives = 125/142 (88.03%), Query Frame = 1 Query: 1 YTDADFCQDRIKGKSVTGYVIMLGGSPIVWASKLQTAVSTSTVEAEYLSLRSAVKDIMWLRHLLVDLGCPQAEPTPVVEDNSACIEWARGMVVSRKTRHFHVSYHLAKEQVNLGTIRMHYAKTSDQLADIFTKALNAEVFER 426 ++D+DFC DR+ GKSVTGY++ LG +PIVW+SKLQ AV+TSTVEAEYL+LRSAVKDIMWLR LL ++GCPQ EPTPVVEDNSAC+EWA M+V+++ RHFHVSYHLAKEQV+LGTIRM Y KT DQ+ADI TKALNA FER Sbjct: 201 FSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLEEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKALNAANFER 342
BLAST of mRNA_H-akashiwo_Contig810.3.1 vs. uniprot
Match: A0A7S3Y1P1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1P1_HETAK) HSP 1 Score: 147 bits (372), Expect = 1.930e-38 Identity = 71/136 (52.21%), Postives = 91/136 (66.91%), Query Frame = 1 Query: 1 YTDADFCQDRIKGKSVTGYVIMLGGSPIVWASKLQTAVSTSTVEAEYLSLRSAVKDIMWLRHLLVDLGCPQAEPTPVVEDNSACIEWARGMVVSRKTRHFHVSYHLAKEQVNLGTIRMHYAKTSDQLADIFTKALN 408 Y DADFC +R KG+S +G+ I LG SPI+W+S++Q V+ +T EAEY+SLR+AV D+MWL+ LL LG Q P+ EDN ACI WA VS+ RH HVSYH KE V I + Y T Q+AD+FTK L+ Sbjct: 848 YADADFCSERHKGRSRSGFAIFLGFSPIIWSSRMQHCVTRNTTEAEYVSLRNAVTDVMWLKRLLESLGYKQG-CVPIYEDNKACITWANDETVSKSARHIHVSYHYTKEMVQSKEIEVKYVDTKHQIADVFTKPLD 982
BLAST of mRNA_H-akashiwo_Contig810.3.1 vs. uniprot
Match: A0A427XXX1_9TREE (Uncharacterized protein n=2 Tax=Saitozyma podzolica TaxID=1890683 RepID=A0A427XXX1_9TREE) HSP 1 Score: 119 bits (298), Expect = 2.300e-31 Identity = 61/137 (44.53%), Postives = 88/137 (64.23%), Query Frame = 1 Query: 1 YTDADF--CQDRIKGKSVTGYVIMLGGSPIVWASKLQTAVSTSTVEAEYLSLRSAVKDIMWLRHLLVDLGCPQAEPTPVVEDNSACIEWARGMVVSRKTRHFHVSYHLAKEQVNLGTIRMHYAKTSDQLADIFTKAL 405 + DAD+ C D +S TG++ MLGGS IVW S+ Q V++STVEAEY+++ A ++ +WL+ LL +LG EPTP+ DN I AR R+T+H + +HL +E + G +R+ Y T+ Q+ADIFTKAL Sbjct: 17 WVDADWGGCHDT--RRSTTGHIFMLGGSAIVWTSRRQATVASSTVEAEYVAVSEAAREAVWLKGLLDELGVTPKEPTPLWCDNQGAIRLARNPGTHRRTKHIAIRWHLIRELIEDGVVRLGYVPTASQVADIFTKAL 151
BLAST of mRNA_H-akashiwo_Contig810.3.1 vs. uniprot
Match: A0A1J3JFW6_NOCCA (Copia protein (Fragment) n=2 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3JFW6_NOCCA) HSP 1 Score: 119 bits (297), Expect = 2.610e-31 Identity = 62/141 (43.97%), Postives = 82/141 (58.16%), Query Frame = 1 Query: 1 YTDADFCQDRIKGKSVTGYVIMLGGSPIVWASKLQTAVSTSTVEAEYLSLRSAVKDIMWLRHLLVDLGCPQAEPTPVVEDNSACIEWARGMVVSRKTRHFHVSYHLAKEQVNLGTIRMHYAKTSDQLADIFTKALNAEVFE 423 Y DAD+ DR +S TGY +GG+ + W SK Q VS S+ EAEY ++R ++MWL+ LL DLG P + DN A I A V +T+H V H +EQ+ LG I Y K+SDQLADIFTKA +++ E Sbjct: 16 YCDADYAGDRSDRRSTTGYCTFIGGNLVTWKSKKQKVVSCSSCEAEYRAMRRLTTELMWLKMLLKDLGIETPRPITMHCDNQAAIHIASNSVFHERTKHIEVDCHKVREQMQLGVILPCYTKSSDQLADIFTKAASSKTCE 156
BLAST of mRNA_H-akashiwo_Contig810.3.1 vs. uniprot
Match: Q9C7Y1_ARATH (Copia-type polyprotein, putative; 28768-32772 n=3 Tax=Arabidopsis thaliana TaxID=3702 RepID=Q9C7Y1_ARATH) HSP 1 Score: 126 bits (316), Expect = 6.850e-31 Identity = 64/141 (45.39%), Postives = 89/141 (63.12%), Query Frame = 1 Query: 1 YTDADFCQDRIKGKSVTGYVIMLGGSPIVWASKLQTAVSTSTVEAEYLSLRSAVKDIMWLRHLLVDLGCPQAEPTPVVEDNSACIEWARGMVVSRKTRHFHVSYHLAKEQVNLGTIRMHYAKTSDQLADIFTKALNAEVFE 423 + D+D+ D KS +GYV MLGG I WASK Q V+ ST EAE++S +WLR++L ++GC Q T V DNS+ I+ ++ V+ +++H HV YH +E V GTIR+ Y T+DQ+ADI TKA+ EVFE Sbjct: 1181 FVDSDYAGDVDDRKSTSGYVFMLGGGAIAWASKKQPIVTLSTTEAEFVSASYGACQAVWLRNVLEEIGCRQEGGTLVFCDNSSTIKLSKNPVLHGRSKHIHVRYHFLRELVKEGTIRLDYCTTTDQVADIMTKAVKREVFE 1321
BLAST of mRNA_H-akashiwo_Contig810.3.1 vs. uniprot
Match: A0A482ZNW2_9GAMM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=uncultured SUP05 cluster bacterium TaxID=655186 RepID=A0A482ZNW2_9GAMM) HSP 1 Score: 121 bits (303), Expect = 2.110e-30 Identity = 57/142 (40.14%), Postives = 88/142 (61.97%), Query Frame = 1 Query: 1 YTDADFCQDRIKGKSVTGYVIMLGGSPIVWASKLQTAVSTSTVEAEYLSLRSAVKDIMWLRHLLVDLGCPQAEPTPVVEDNSACIEWARGMVVSRKTRHFHVSYHLAKEQVNLGTIRMHYAKTSDQLADIFTKALNAEVFER 426 Y+DAD+ D KS TGY+ +GG+ + W K Q++V+ ST E+EY++L SA ++ +W+R L DLG PQ++PT + EDN + I A+ +++H + YH +EQV+ I + Y T D +ADI TK + E FE+ Sbjct: 193 YSDADWGGDCNDHKSTTGYLFQIGGTAVTWKCKKQSSVALSTAESEYMALSSAAQEAVWIRELNSDLGNPQSQPTLIYEDNQSAIAMAKNPQFHGRSKHIGIKYHFIREQVSNDKICLQYCPTEDMIADILTKGIGPEKFEK 334
BLAST of mRNA_H-akashiwo_Contig810.3.1 vs. uniprot
Match: A0A8D8N898_CULPI (Copia protein n=1 Tax=Culex pipiens TaxID=7175 RepID=A0A8D8N898_CULPI) HSP 1 Score: 115 bits (289), Expect = 3.660e-30 Identity = 57/134 (42.54%), Postives = 83/134 (61.94%), Query Frame = 1 Query: 10 ADFCQDRIKGKSVTGYVIMLGGSPIVWASKLQTAVSTSTVEAEYLSLRSAVKDIMWLRHLLVDLGCPQAEPTPVVEDNSACIEWARGMVVSRKTRHFHVSYHLAKEQVNLGTIRMHYAKTSDQLADIFTKALNA 411 AD+ D KS +G+V G + I WAS+ QT VSTST+EAEY++L AV++++WLR LL +LG Q PT + EDN +C+++ +R+++H +H K+ G I + Y T+D LADI TK L A Sbjct: 12 ADWASDTSDRKSNSGFVFRFGEATISWASRKQTCVSTSTMEAEYVALAEAVQEVVWLRRLLAELGEKQQTPTTIFEDNKSCLDFVALERQNRRSKHIDTKFHYIKDAATSGQIVLRYCTTTDMLADIMTKPLGA 145
BLAST of mRNA_H-akashiwo_Contig810.3.1 vs. uniprot
Match: A0A1X7SFX4_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7SFX4_AMPQE) HSP 1 Score: 115 bits (289), Expect = 8.940e-30 Identity = 55/142 (38.73%), Postives = 83/142 (58.45%), Query Frame = 1 Query: 1 YTDADFCQDRIKGKSVTGYVIMLGGSPIVWASKLQTAVSTSTVEAEYLSLRSAVKDIMWLRHLLVDLGCPQAEPTPVVEDNSACIEWARGMVVSRKTRHFHVSYHLAKEQVNLGTIRMHYAKTSDQLADIFTKALNAEVFER 426 Y+DAD+ D +S TGY+ +GG + W SK Q V+ ST EAEY++L S ++ +W+R L D+ PT + EDN + I A+ + +H + YH +EQV+ ++++ Y +T D +ADIFTK L E FER Sbjct: 31 YSDADWGGDVDNYRSTTGYIFQIGGVAVSWKSKRQDCVALSTAEAEYMALASTAQEAVWMRELNADMNNKPNGPTTIFEDNQSAISMAKNPQFHGRAKHIGIKYHFIREQVSTESVQIKYCRTEDMVADIFTKGLTHEKFER 172
BLAST of mRNA_H-akashiwo_Contig810.3.1 vs. uniprot
Match: A0A085LNI6_9BILA (Uncharacterized protein n=2 Tax=Trichuris suis TaxID=68888 RepID=A0A085LNI6_9BILA) HSP 1 Score: 114 bits (286), Expect = 1.260e-29 Identity = 54/142 (38.03%), Postives = 84/142 (59.15%), Query Frame = 1 Query: 1 YTDADFCQDRIKGKSVTGYVIMLGGSPIVWASKLQTAVSTSTVEAEYLSLRSAVKDIMWLRHLLVDLGCPQAEPTPVVEDNSACIEWARGMVVSRKTRHFHVSYHLAKEQVNLGTIRMHYAKTSDQLADIFTKALNAEVFER 426 + DAD+ D KS +GYV +G S I W+SK Q+ V+ S+ EAEY++ A +++ WLR LL D+ PQ PT + EDN CI+ A+ S++T+H V +H ++ G + + Y +S+ AD+ TK L + F+R Sbjct: 23 FVDADWAGDHADRKSTSGYVFQIGHSTIAWSSKKQSVVAMSSTEAEYVAASEACREVQWLRQLLADMEVPQDGPTKIYEDNQGCIKVAQSDRCSQRTKHIDVRHHQLRDLCESGIVSLVYCPSSEMPADVLTKPLGKDKFDR 164
BLAST of mRNA_H-akashiwo_Contig810.3.1 vs. uniprot
Match: UPI0008FD27FA (uncharacterized protein LOC109116892 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI0008FD27FA) HSP 1 Score: 122 bits (306), Expect = 1.520e-29 Identity = 61/142 (42.96%), Postives = 87/142 (61.27%), Query Frame = 1 Query: 1 YTDADFCQDRIKGKSVTGYVIMLGGSPIVWASKLQTAVSTSTVEAEYLSLRSAVKDIMWLRHLLVDLGCPQAEPTPVVEDNSACIEWARGMVVSRKTRHFHVSYHLAKEQVNLGTIRMHYAKTSDQLADIFTKALNAEVFER 426 Y DAD+ DRI KS TG+ +GG+ + W SK QT V+ S+ EAEY ++ + ++MWL+ LL DLG +P P+ DN A I A V +T+H V HL +E++ G I Y K+S+QLADIFTKA ++ V ++ Sbjct: 1150 YCDADWAGDRIDRKSTTGFCTFVGGNLVTWKSKKQTVVARSSAEAEYRAMANTTCELMWLKSLLHDLGITSPQPMPLHCDNQAAIHIAANSVFHERTKHIEVDCHLIREKITQGVITTIYTKSSEQLADIFTKATSSYVLDK 1291 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig810.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig810.3.1 >prot_H-akashiwo_Contig810.3.1 ID=prot_H-akashiwo_Contig810.3.1|Name=mRNA_H-akashiwo_Contig810.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=142bp YTDADFCQDRIKGKSVTGYVIMLGGSPIVWASKLQTAVSTSTVEAEYLSLback to top mRNA from alignment at H-akashiwo_Contig810:163856..164281- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig810.3.1 ID=mRNA_H-akashiwo_Contig810.3.1|Name=mRNA_H-akashiwo_Contig810.3.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=426bp|location=Sequence derived from alignment at H-akashiwo_Contig810:163856..164281- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig810:163856..164281- >mRNA_H-akashiwo_Contig810.3.1 ID=mRNA_H-akashiwo_Contig810.3.1|Name=mRNA_H-akashiwo_Contig810.3.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=426bp|location=Sequence derived from alignment at H-akashiwo_Contig810:163856..164281- (Heterosigma akashiwo CCMP452)back to top |