mRNA_H-akashiwo_Contig807.13.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig807.13.1 vs. uniprot
Match: B2XTB4_HETAK (Conserved hypothetical plastid protein Ycf54 n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=B2XTB4_HETAK) HSP 1 Score: 236 bits (603), Expect = 7.580e-79 Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 1 Query: 1 MSIKYYFVVGSKQFLCDEEPLEEILRERLQSLNGKSNMLVIPGGFNGEPPVNFWILENPKFLEASEFQSLKGKLPNNPIAIVSTSKTFITWLKLRLNHVYTGNFSQTNISPLDF 342 MSIKYYFVVGSKQFLCDEEPLEEILRERLQSLNGKSNMLVIPGGFNGEPPVNFWILENPKFLEASEFQSLKGKLPNNPIAIVSTSKTFITWLKLRLNHVYTGNFSQTNISPLDF Sbjct: 1 MSIKYYFVVGSKQFLCDEEPLEEILRERLQSLNGKSNMLVIPGGFNGEPPVNFWILENPKFLEASEFQSLKGKLPNNPIAIVSTSKTFITWLKLRLNHVYTGNFSQTNISPLDF 114
BLAST of mRNA_H-akashiwo_Contig807.13.1 vs. uniprot
Match: A0A0R0M4M4_9CYAN (Uncharacterized protein n=7 Tax=Cylindrospermopsis TaxID=77021 RepID=A0A0R0M4M4_9CYAN) HSP 1 Score: 102 bits (253), Expect = 1.170e-25 Identity = 47/102 (46.08%), Postives = 68/102 (66.67%), Query Frame = 1 Query: 10 KYYFVVGSKQFLCDEEPLEEILRERLQSLNGKSNMLVIPGGFNGEPPVNFWILENPKFLEASEFQSLKGKLPNNPIAIVSTSKTFITWLKLRLNHVYTGNFS 315 KY++V+ S++FL +EEPLEE+LRER+++ + + E ++FW+++NP FLEA E +K K P P+AI+ST FITWLKLRL HV G F+ Sbjct: 3 KYHYVLASQKFLLEEEPLEEVLRERIRNYHER------------EKEIDFWLVKNPAFLEAPEMSDIKKKCPQLPVAIISTDSQFITWLKLRLEHVIVGEFT 92
BLAST of mRNA_H-akashiwo_Contig807.13.1 vs. uniprot
Match: B7T235_VAULI (Hypothetical 12.7KD protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=B7T235_VAULI) HSP 1 Score: 99.0 bits (245), Expect = 2.020e-24 Identity = 50/101 (49.50%), Postives = 64/101 (63.37%), Query Frame = 1 Query: 10 KYYFVVGSKQFLCDEEPLEEILRERLQSLNGKSNMLVIPGGFNGEPPVNFWILENPKFLEASEFQSLKGKLPNNPIAIVSTSKTFITWLKLRLNHVYTGNF 312 KYYF+V S QFL EEPLEE+LRER+Q ++FW+L P FL++ ++ L +LP N IAIVST+K FITWLKLRLN+V+ G F Sbjct: 5 KYYFIVASNQFLITEEPLEEVLRERIQYYRITKKR------------IDFWLLPKPTFLQSKLYKDLTKQLPENCIAIVSTNKIFITWLKLRLNNVFIGKF 93
BLAST of mRNA_H-akashiwo_Contig807.13.1 vs. uniprot
Match: A0A1Z4USG3_9CYAN (Uncharacterized protein n=6 Tax=Nostocales TaxID=1161 RepID=A0A1Z4USG3_9CYAN) HSP 1 Score: 98.2 bits (243), Expect = 4.170e-24 Identity = 50/111 (45.05%), Postives = 71/111 (63.96%), Query Frame = 1 Query: 13 YYFVVGSKQFLCDEEPLEEILRERLQSLNGKSNMLVIPGGFNGEPPVNFWILENPKFLEASEFQSLKGKLPNNPIAIVSTSKTFITWLKLRLNHVYTGNF---SQTNISPL 336 YY+V+ S+ FL +EEPLEE+L+ER ++ + + E ++FW+++NP FLEA E + K K P P+AI+ST+ FITWLKLRL +V TG F S T +PL Sbjct: 4 YYYVLASQHFLLEEEPLEEVLKERTRNYHEQ------------EKEIDFWLVKNPAFLEAPEMAANKAKCPKPPVAIISTNSQFITWLKLRLEYVITGEFPAPSATIPNPL 102
BLAST of mRNA_H-akashiwo_Contig807.13.1 vs. uniprot
Match: A0A3D1PHA0_9CYAN (DUF2488 domain-containing protein n=1 Tax=Cyanobacteria bacterium UBA11049 TaxID=2055787 RepID=A0A3D1PHA0_9CYAN) HSP 1 Score: 97.1 bits (240), Expect = 1.150e-23 Identity = 47/109 (43.12%), Postives = 69/109 (63.30%), Query Frame = 1 Query: 13 YYFVVGSKQFLCDEEPLEEILRERLQSLNGKSNMLVIPGGFNGEPPVNFWILENPKFLEASEFQSLKGKLPNNPIAIVSTSKTFITWLKLRLNHVYTGNFSQTNISPLD 339 YY+V+ S++FL +EEP++E+LRER + + K E ++FW+++ P FLEA E Q++K + P +AIVST+ FITWLKLRL +V TG F + S D Sbjct: 4 YYYVLASQKFLLEEEPIDEVLRERTRDYHEK------------EKEIDFWLVKQPAFLEAPEMQAIKNQCPQPSVAIVSTNSQFITWLKLRLEYVLTGQFQAPSDSISD 100
BLAST of mRNA_H-akashiwo_Contig807.13.1 vs. uniprot
Match: A0A6P2ACC6_9CHRO (DUF2488 family protein n=1 Tax=Gloeocapsa sp. DLM2.Bin57 TaxID=2480214 RepID=A0A6P2ACC6_9CHRO) HSP 1 Score: 97.1 bits (240), Expect = 1.190e-23 Identity = 49/111 (44.14%), Postives = 70/111 (63.06%), Query Frame = 1 Query: 13 YYFVVGSKQFLCDEEPLEEILRERLQSLNGKSNMLVIPGGFNGEPPVNFWILENPKFLEASEFQSLKGKLPNNPIAIVSTSKTFITWLKLRLNHVYTGNF---SQTNISPL 336 YY+V+ S++FL +EEPL+E+L+ER+++ ++ ++FW++ P FLEA EF +K K+P AIVST+ TFITWLKLRL V TG F S+T PL Sbjct: 4 YYYVLASQKFLLEEEPLDEVLQERIRNYQEQNK------------EIDFWVVTQPAFLEAPEFAEIKAKVPRESAAIVSTNSTFITWLKLRLEFVITGEFDAPSETIPDPL 102
BLAST of mRNA_H-akashiwo_Contig807.13.1 vs. uniprot
Match: A0A1Z4JCR8_LEPBY (Uncharacterized protein n=1 Tax=Leptolyngbya boryana NIES-2135 TaxID=1973484 RepID=A0A1Z4JCR8_LEPBY) HSP 1 Score: 96.7 bits (239), Expect = 1.640e-23 Identity = 47/107 (43.93%), Postives = 64/107 (59.81%), Query Frame = 1 Query: 13 YYFVVGSKQFLCDEEPLEEILRERLQSLNGKSNMLVIPGGFNGEPPVNFWILENPKFLEASEFQSLKGKLPNNPIAIVSTSKTFITWLKLRLNHVYTGNFSQTNISP 333 YY+V+ S++FL EEP+EE+L+ER + K+ ++FW+++ P FLEA E K K P +AIVST K FITWLKLRL +V TG F Q+ P Sbjct: 4 YYYVLASQKFLLQEEPIEEVLKERYRDYAEKNR------------EIDFWVIKEPAFLEAPEMAENKAKCPRPAVAIVSTKKQFITWLKLRLEYVITGEFQQSETIP 98
BLAST of mRNA_H-akashiwo_Contig807.13.1 vs. uniprot
Match: A0A1U7I8X6_9CYAN (Uncharacterized protein n=2 Tax=Phormidium TaxID=1198 RepID=A0A1U7I8X6_9CYAN) HSP 1 Score: 96.7 bits (239), Expect = 1.680e-23 Identity = 48/109 (44.04%), Postives = 70/109 (64.22%), Query Frame = 1 Query: 13 YYFVVGSKQFLCDEEPLEEILRERLQSLNGKSNMLVIPGGFNGEPPVNFWILENPKFLEASEFQSLKGKLPNNPIAIVSTSKTFITWLKLRLNHVYTGNFSQTNISPLD 339 YY+V+ S++FL +EEPL+E+LRER++ + K E ++FW+++ P FLEA E ++K K P AIVST++ FITWLKLRL +V TG F+ + S D Sbjct: 4 YYYVLASQKFLLEEEPLDEVLRERVRDYHEK------------EKEIDFWLVKQPAFLEAPEMAAIKAKTPQPACAIVSTNQQFITWLKLRLEYVVTGEFTAPSNSIPD 100
BLAST of mRNA_H-akashiwo_Contig807.13.1 vs. uniprot
Match: A0A8J6RP71_9CYAN (DUF2488 family protein n=5 Tax=Cyanobacteria TaxID=1117 RepID=A0A8J6RP71_9CYAN) HSP 1 Score: 96.7 bits (239), Expect = 1.680e-23 Identity = 46/109 (42.20%), Postives = 68/109 (62.39%), Query Frame = 1 Query: 13 YYFVVGSKQFLCDEEPLEEILRERLQSLNGKSNMLVIPGGFNGEPPVNFWILENPKFLEASEFQSLKGKLPNNPIAIVSTSKTFITWLKLRLNHVYTGNFSQTNISPLD 339 YY+V+GS++FL +EEP +E+L+ER+++ N + E ++FW+++ P FLEA E ++K K P A++ST+ FITWLKLRL V TG F N S D Sbjct: 4 YYYVLGSQRFLLEEEPFDEVLKERIRNYNEQ------------EKEIDFWLVKQPAFLEAPEMATIKAKCPQPAAAVISTNSQFITWLKLRLEFVITGEFQAPNESIPD 100
BLAST of mRNA_H-akashiwo_Contig807.13.1 vs. uniprot
Match: A0A1Z4RY74_9NOSO (Uncharacterized protein n=2 Tax=Nostocaceae TaxID=1162 RepID=A0A1Z4RY74_9NOSO) HSP 1 Score: 96.7 bits (239), Expect = 1.680e-23 Identity = 50/111 (45.05%), Postives = 68/111 (61.26%), Query Frame = 1 Query: 13 YYFVVGSKQFLCDEEPLEEILRERLQSLNGKSNMLVIPGGFNGEPPVNFWILENPKFLEASEFQSLKGKLPNNPIAIVSTSKTFITWLKLRLNHVYTGNF---SQTNISPL 336 YY+V+ SKQFL DEEP+ E+L+ER + + + E ++FW+++ P FLEA E +K K P AI+ST+ FITWLKLRL +V TG F SQT +PL Sbjct: 4 YYYVLASKQFLVDEEPIHEVLKERTRHYHEQ------------EKEIDFWLVQKPAFLEAPELAEVKAKCPKPAAAIISTNSQFITWLKLRLEYVITGEFQAPSQTIPNPL 102 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig807.13.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig807.13.1 >prot_H-akashiwo_Contig807.13.1 ID=prot_H-akashiwo_Contig807.13.1|Name=mRNA_H-akashiwo_Contig807.13.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=115bp MSIKYYFVVGSKQFLCDEEPLEEILRERLQSLNGKSNMLVIPGGFNGEPPback to top mRNA from alignment at H-akashiwo_Contig807:14285..14670+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig807.13.1 ID=mRNA_H-akashiwo_Contig807.13.1|Name=mRNA_H-akashiwo_Contig807.13.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=386bp|location=Sequence derived from alignment at H-akashiwo_Contig807:14285..14670+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig807:14285..14670+ >mRNA_H-akashiwo_Contig807.13.1 ID=mRNA_H-akashiwo_Contig807.13.1|Name=mRNA_H-akashiwo_Contig807.13.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=345bp|location=Sequence derived from alignment at H-akashiwo_Contig807:14285..14670+ (Heterosigma akashiwo CCMP452)back to top |