mRNA_H-akashiwo_Contig807.1.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig807.1.1
Unique NamemRNA_H-akashiwo_Contig807.1.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig807.1.1 vs. uniprot
Match: B2XTA4_HETAK (Cytochrome f n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=B2XTA4_HETAK)

HSP 1 Score: 438 bits (1127), Expect = 1.940e-153
Identity = 238/294 (80.95%), Postives = 240/294 (81.63%), Query Frame = 1
Query:    1 IALILGFFNFTIVSTAQAYPIFAQQAYSNPREANGRIACANCHLAQKPVEIETPQAVLPNSVFEAIVKIPYDNNSKQILANGKLGGLNVGAVVILPEGFKLAPKDQIPAEVKEKR----------------------------------SPDPEKDKDIYFIKYPIYVGGNRGRGQVYPSGEKSNNN-----------------KGESTIIIEAVEGKEVKQSIPAGLNLIVSEKSLVQLDQPLTKDPNVGGFGQNETEIVLQSPSRIVGYMALCFSILLCQIFLVIKKKNLKK 729
            IALILGFFNFTIVSTAQAYPIFAQQAYSNPREANGRIACANCHLAQKPVEIETPQAVLPNSVFEAIVKIPYDNNSKQILANGKLGGLNVGAVVILPEGFKLAPKDQIPAEVKEK                                   +PDPEKDKDIYFIKYPIYVGGNRGRGQVYPSGEKSNNN                 KGESTIIIEAVEGKEVKQSIPAGLNLIVSEKSLVQLDQPLTKDPNVGGFGQNETEIVLQSPSRIVGYMALCFSILLCQIFLVIKKK  +K
Sbjct:   19 IALILGFFNFTIVSTAQAYPIFAQQAYSNPREANGRIACANCHLAQKPVEIETPQAVLPNSVFEAIVKIPYDNNSKQILANGKLGGLNVGAVVILPEGFKLAPKDQIPAEVKEKSKGVYITPYSADNENILVVGPISGNDHQEIIFPVLAPDPEKDKDIYFIKYPIYVGGNRGRGQVYPSGEKSNNNVYTATVSGQIKQITVSEKGESTIIIEAVEGKEVKQSIPAGLNLIVSEKSLVQLDQPLTKDPNVGGFGQNETEIVLQSPSRIVGYMALCFSILLCQIFLVIKKKQFEK 312          
BLAST of mRNA_H-akashiwo_Contig807.1.1 vs. uniprot
Match: A0A7U0QGK4_OLILU (Cytochrome f n=1 Tax=Olisthodiscus luteus TaxID=83000 RepID=A0A7U0QGK4_OLILU)

HSP 1 Score: 312 bits (799), Expect = 1.250e-103
Identity = 165/292 (56.51%), Postives = 195/292 (66.78%), Query Frame = 1
Query:    7 LILGFFNFTIVSTAQAYPIFAQQAYSNPREANGRIACANCHLAQKPVEIETPQAVLPNSVFEAIVKIPYDNNSKQILANGKLGGLNVGAVVILPEGFKLAPKDQIPAEVKEKR----------------------------------SPDPEKDKDIYFIKYPIYVGGNRGRGQVYPSGEKSNNN-----------------KGESTIIIEAVEGKEVKQSIPAGLNLIVSEKSLVQLDQPLTKDPNVGGFGQNETEIVLQSPSRIVGYMALCFSILLCQIFLVIKKKNLKK 729
            ++ G  +F+I   A++YPIFAQQAYSNPREANGRI CANCHLA KPVE E PQAVLPN VFE +VKIPYD  +KQILANG  GGLNVGAVVILPEGFKLAP D+I AE+KEK                                   SPDP  +K + ++KYPIYVGGNRGRGQVYP+GEKSNNN                 K E  I I++  G+ VKQ +P GL L+V E  +VQ +QPL  DPNVGGFGQ ETE+VLQ+P+RIVGYM   FS++L Q+FLV+KKK  +K
Sbjct:   17 ILFGLTSFSIPDNAKSYPIFAQQAYSNPREANGRIVCANCHLASKPVEFEAPQAVLPNKVFETVVKIPYDVKNKQILANGTKGGLNVGAVVILPEGFKLAPNDKISAEIKEKNKGVYISPYSSTKDNILVVGPISGDSHREIIFPILSPDPASNKQVNYLKYPIYVGGNRGRGQVYPNGEKSNNNTYTSLAAGRISQIQKSEKNEFEITIQSNSGESVKQVVPKGLELLVKENDIVQSEQPLVIDPNVGGFGQAETEVVLQNPTRIVGYMCFAFSVILSQLFLVLKKKQFEK 308          
BLAST of mRNA_H-akashiwo_Contig807.1.1 vs. uniprot
Match: A0A514CPZ6_9STRA (Cytochrome f n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A514CPZ6_9STRA)

HSP 1 Score: 306 bits (785), Expect = 1.780e-101
Identity = 164/283 (57.95%), Postives = 193/283 (68.20%), Query Frame = 1
Query:   34 IVSTAQAYPIFAQQAYSNPREANGRIACANCHLAQKPVEIETPQAVLPNSVFEAIVKIPYDNNSKQILANGKLGGLNVGAVVILPEGFKLAPKDQIPAEVKEKR----------------------------------SPDPEKDKDIYFIKYPIYVGGNRGRGQVYPSGEKSNNN-----------------KGESTIIIEAVEGKEVKQSIPAGLNLIVSEKSLVQLDQPLTKDPNVGGFGQNETEIVLQSPSRIVGYMALCFSILLCQIFLVIKKKNLKK 729
            I   A A+PI+AQQAY+NPREANGRIACANCHLAQKPVE+ETPQAVLPNSVFE +VKIPYD NSKQILA G  GGLNVGAVVILP+GFKLAP D++  E+KEK                                   +PDPE +K I ++KYPIY GGNRGRGQV P+G+K+NNN                 KG   ++I+  +G+++ Q IP GL+L V +   V L+QPLTKDPNVGGFGQ E EIVLQSP+RI GYMALCF I+L QIFLVIKKK  +K
Sbjct:   28 ISEAANAFPIYAQQAYANPREANGRIACANCHLAQKPVELETPQAVLPNSVFETVVKIPYDTNSKQILAGGTKGGLNVGAVVILPDGFKLAPADKVSKEIKEKNKGVYISPYSAKAENILVVGPIPGDKHQEIIFPILAPDPETNKTINYLKYPIYAGGNRGRGQVNPTGDKTNNNAILATKAGQIVDIINVEKGGYELVIKTKDGEKISQQIPKGLDLAVLKGKTVVLEQPLTKDPNVGGFGQAEAEIVLQSPARIYGYMALCFFIVLTQIFLVIKKKQFEK 310          
BLAST of mRNA_H-akashiwo_Contig807.1.1 vs. uniprot
Match: A0A8F0F9U7_9PHAE (Cytochrome f n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9U7_9PHAE)

HSP 1 Score: 306 bits (783), Expect = 3.240e-101
Identity = 163/295 (55.25%), Postives = 202/295 (68.47%), Query Frame = 1
Query:    1 IALILGFFNFTI-VSTAQAYPIFAQQAYSNPREANGRIACANCHLAQKPVEIETPQAVLPNSVFEAIVKIPYDNNSKQILANGKLGGLNVGAVVILPEGFKLAPKDQIPAEVKEKR----------------------------------SPDPEKDKDIYFIKYPIYVGGNRGRGQVYPSGEKSNNN-----------------KGESTIIIEAVEGKEVKQSIPAGLNLIVSEKSLVQLDQPLTKDPNVGGFGQNETEIVLQSPSRIVGYMALCFSILLCQIFLVIKKKNLKK 729
            I+ IL   +FT+ +  +QAYPI+AQQAY+NPR ANGRIACANCHLA+KPV+IE+P+A+LPN VFEA VKIPY  ++KQIL NG+L GLNVGAVVILPEGFKLAP + I  E+KEK                                   SPDP  +K I F+KYPIYVG NRGRGQ+YP+GEKSNNN                 KGE+ + I   +GKE+KQ+IP GL+L+VS+K  ++LDQPLT+DPNVGGFGQ + EIVLQ P+RI+G++A  FS+L  QIF VIKKK  +K
Sbjct:   13 ISFILIISSFTLCIQMSQAYPIYAQQAYANPRAANGRIACANCHLAEKPVQIESPKAILPNKVFEAAVKIPYAKDAKQILGNGQLSGLNVGAVVILPEGFKLAPNNLISKEIKEKNKGVYISPYSSTQDNILVVGPIAGDTHQEIIFPVLSPDPATNKKINFLKYPIYVGANRGRGQIYPTGEKSNNNIVTSSLEGQITELQVLEKGETALTITNSQGKEIKQTIPKGLSLVVSKKDNIKLDQPLTRDPNVGGFGQTDVEIVLQDPARIIGFIAFAFSVLFTQIFFVIKKKQFEK 307          
BLAST of mRNA_H-akashiwo_Contig807.1.1 vs. uniprot
Match: A0A8E5XRH3_9PHAE (Cytochrome f n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRH3_9PHAE)

HSP 1 Score: 304 bits (779), Expect = 1.490e-100
Identity = 161/293 (54.95%), Postives = 201/293 (68.60%), Query Frame = 1
Query:    4 ALILGFFNFTIVSTAQAYPIFAQQAYSNPREANGRIACANCHLAQKPVEIETPQAVLPNSVFEAIVKIPYDNNSKQILANGKLGGLNVGAVVILPEGFKLAPKDQIPAEVKEKR----------------------------------SPDPEKDKDIYFIKYPIYVGGNRGRGQVYPSGEKSNNN-----------------KGESTIIIEAVEGKEVKQSIPAGLNLIVSEKSLVQLDQPLTKDPNVGGFGQNETEIVLQSPSRIVGYMALCFSILLCQIFLVIKKKNLKK 729
            +L  GFFN+T    +QAYPI+AQQAY+NPR ANGRIACANCHLA+KPV+IE+P+++LPN VF+AIVKIPY  ++KQIL NG+L  LNVGAVVILPEGFKLAP + I  E++EK                                   SPDP  +K I F+KYPIYVG NRGRGQ+YP+GEKSNNN                 KGE  I +   EGKE+KQ++P GL+LI+S+  L+ +DQP+TKDPNVGGFGQ +TEIVLQ+P+R++G++   FSILL QIF VIKKK  +K
Sbjct:   23 SLSFGFFNYT----SQAYPIYAQQAYNNPRAANGRIACANCHLAEKPVQIESPKSILPNKVFDAIVKIPYAKDAKQILGNGQLSSLNVGAVVILPEGFKLAPSNLISREIQEKNKGIYISPYSSSQENILVVGPVSGDKHQEIIFPVLSPDPTTNKKINFLKYPIYVGANRGRGQIYPTGEKSNNNIVTSSYNGQVKEIQTLEKGEIIITLLDSEGKEIKQTVPKGLSLIISKNDLITVDQPITKDPNVGGFGQTDTEIVLQNPNRVLGFIIFAFSILLTQIFFVIKKKQFEK 311          
BLAST of mRNA_H-akashiwo_Contig807.1.1 vs. uniprot
Match: A0A2I4Q308_9PHAE (Cytochrome f n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q308_9PHAE)

HSP 1 Score: 303 bits (775), Expect = 5.470e-100
Identity = 157/282 (55.67%), Postives = 193/282 (68.44%), Query Frame = 1
Query:   37 VSTAQAYPIFAQQAYSNPREANGRIACANCHLAQKPVEIETPQAVLPNSVFEAIVKIPYDNNSKQILANGKLGGLNVGAVVILPEGFKLAPKDQIPAEVKEKR----------------------------------SPDPEKDKDIYFIKYPIYVGGNRGRGQVYPSGEKSNNN-----------------KGESTIIIEAVEGKEVKQSIPAGLNLIVSEKSLVQLDQPLTKDPNVGGFGQNETEIVLQSPSRIVGYMALCFSILLCQIFLVIKKKNLKK 729
            ++ ++AYPI+AQQAY+NPR ANGRIACANCHLA+KP+EIE P+A+LPNSVFE  +KIPY  ++KQIL NG+L GLNVGAVVILPEGFKLAPK+ +  E +EK                                   SPDPE +K + F+KYPIYVGGNRGRGQ+YP+GEKSNNN                  GE+ I I   +GKE KQSIP GL+L+VS+K  +++DQPLTKDPNVGGFGQ +TEIVLQ P+RI+G+    FS+L  QIF VIKKK  +K
Sbjct:   27 ITNSEAYPIYAQQAYTNPRAANGRIACANCHLAEKPIEIEAPKAILPNSVFETAIKIPYAKDAKQILGNGQLSGLNVGAVVILPEGFKLAPKNLLTKEFQEKNKGVYISPYSSTQDNILVVGPIQGETHSEIVFPILSPDPETNKKVNFLKYPIYVGGNRGRGQIYPTGEKSNNNMVTASTEGQVFEIETASNGETLISIRNSDGKETKQSIPKGLSLVVSKKDNIKVDQPLTKDPNVGGFGQMDTEIVLQDPARIIGFSLFAFSVLFTQIFFVIKKKQFEK 308          
BLAST of mRNA_H-akashiwo_Contig807.1.1 vs. uniprot
Match: A0A516ICS4_9PHAE (Cytochrome f n=32 Tax=Phaeophyceae TaxID=2870 RepID=A0A516ICS4_9PHAE)

HSP 1 Score: 302 bits (773), Expect = 1.070e-99
Identity = 157/282 (55.67%), Postives = 194/282 (68.79%), Query Frame = 1
Query:   37 VSTAQAYPIFAQQAYSNPREANGRIACANCHLAQKPVEIETPQAVLPNSVFEAIVKIPYDNNSKQILANGKLGGLNVGAVVILPEGFKLAPKDQIPAEVKEKR----------------------------------SPDPEKDKDIYFIKYPIYVGGNRGRGQVYPSGEKSNNN-----------------KGESTIIIEAVEGKEVKQSIPAGLNLIVSEKSLVQLDQPLTKDPNVGGFGQNETEIVLQSPSRIVGYMALCFSILLCQIFLVIKKKNLKK 729
            V  ++AYPI+AQQAY+NPR ANGRIACANCHLA+KPV+IE+P+A+LPN VFEA VKIPY  ++KQ+L+NG+L GLNVGAVVILPEGFKLAPK+ I  E++EK                                   SPDP  +K I F+KYPIYVG NRGRGQ+YP+GEKSNNN                 KGE++I I    G E+KQ+IP GL+L+VS+K  ++LDQPLTKDPNVGGFGQ + EIVLQ PSR++G++   FS+L  QIF VIKKK  +K
Sbjct:   26 VKMSEAYPIYAQQAYTNPRAANGRIACANCHLAEKPVQIESPKAILPNKVFEAAVKIPYAKDAKQVLSNGQLSGLNVGAVVILPEGFKLAPKNLISKEIQEKSKGVYISPYSSTQDNILVVGPIAGDKNQEIIFPILSPDPATNKKINFLKYPIYVGANRGRGQIYPTGEKSNNNIVTSSSEGQIAEIKTLEKGETSITIIGSTGTEIKQTIPKGLSLVVSQKDTIKLDQPLTKDPNVGGFGQTDVEIVLQDPSRVIGFIIFAFSVLFTQIFFVIKKKQFEK 307          
BLAST of mRNA_H-akashiwo_Contig807.1.1 vs. uniprot
Match: A0A7S6U9U4_9STRA (Cytochrome f n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6U9U4_9STRA)

HSP 1 Score: 300 bits (767), Expect = 9.550e-99
Identity = 156/286 (54.55%), Postives = 194/286 (67.83%), Query Frame = 1
Query:   22 FNFTIVSTAQAYPIFAQQAYSNPREANGRIACANCHLAQKPVEIETPQAVLPNSVFEAIVKIPYDNNSKQILANGKLGGLNVGAVVILPEGFKLAPKDQIPAEVKEKR----------------------------------SPDPEKDKDIYFIKYPIYVGGNRGRGQVYPSGEKSNNN----------------KGESTIIIEAVEGKEVKQSIPAGLNLIVSEKSLVQLDQPLTKDPNVGGFGQNETEIVLQSPSRIVGYMALCFSILLCQIFLVIKKKNLKK 729
            FN+ I   + AYP++AQQAY+NPREANGRIACANCHLA+KPV+I+TPQA+LPNS+FEA V+IPY   SKQIL++GK G LNVGAVVILP+ FKLAP D+I  E+KEK                                   SPDP  +K + ++KYPIYVG NRGRGQ+YP+GEKSNNN                  E+ + I   +GKE KQ+IP GLNL++S K  +++DQPLTKDPNVGGFGQ ETEIVLQ+P RI+G+M   FS+L+ QIF V+KKK  +K
Sbjct:   26 FNYDI-QNSNAYPVYAQQAYTNPREANGRIACANCHLAEKPVQIKTPQAILPNSIFEATVEIPYAKGSKQILSSGKTGSLNVGAVVILPDEFKLAPNDRISKEIKEKNKGVYISPYSSSQENILVVGPIAGDTHQEIIFPILSPDPATNKKVNYLKYPIYVGANRGRGQIYPTGEKSNNNLITSLYSGQINNIEISDKETIVTIFTPDGKEHKQNIPPGLNLLISNKESIKIDQPLTKDPNVGGFGQTETEIVLQNPKRIIGFMGFAFSVLITQIFFVLKKKQFEK 310          
BLAST of mRNA_H-akashiwo_Contig807.1.1 vs. uniprot
Match: A0A8F0FB28_9PHAE (Cytochrome f n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FB28_9PHAE)

HSP 1 Score: 299 bits (765), Expect = 1.740e-98
Identity = 157/282 (55.67%), Postives = 193/282 (68.44%), Query Frame = 1
Query:   37 VSTAQAYPIFAQQAYSNPREANGRIACANCHLAQKPVEIETPQAVLPNSVFEAIVKIPYDNNSKQILANGKLGGLNVGAVVILPEGFKLAPKDQIPAEVKEKR----------------------------------SPDPEKDKDIYFIKYPIYVGGNRGRGQVYPSGEKSNNN-----------------KGESTIIIEAVEGKEVKQSIPAGLNLIVSEKSLVQLDQPLTKDPNVGGFGQNETEIVLQSPSRIVGYMALCFSILLCQIFLVIKKKNLKK 729
            V  +QAYPI+AQQAY+NPR ANGR+ACANCHLA+KPV+IE+P+AVLPN VFEA VKIPY  ++KQIL NG+L GLNVGAVVILPEGFKLAP + I  E+++K                                   SPDP  +K + F+KYPIYVG NRGRGQ+YP+GEKSNNN                 KGE+++ I    GKEV Q+IP GL+L+VS+K  ++LDQPLTKDPNVGGFGQ + EIVLQ P+RI+G++   FS+LL QIF VIKKK  +K
Sbjct:   26 VKISQAYPIYAQQAYTNPRAANGRLACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYAKDAKQILGNGQLSGLNVGAVVILPEGFKLAPNNLISKEIQQKNKGVYISPYSSTQDNILVVGPIAGDTHQEINFPILSPDPATNKKVNFLKYPIYVGANRGRGQIYPTGEKSNNNIVTSSYGGQIIDIQTLDKGETSVTIINSSGKEVNQTIPKGLSLVVSKKDNIKLDQPLTKDPNVGGFGQTDVEIVLQDPTRIIGFIFFAFSVLLTQIFFVIKKKQFEK 307          
BLAST of mRNA_H-akashiwo_Contig807.1.1 vs. uniprot
Match: A0A6B7F215_9PHAE (Cytochrome f n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7F215_9PHAE)

HSP 1 Score: 298 bits (764), Expect = 2.470e-98
Identity = 155/282 (54.96%), Postives = 192/282 (68.09%), Query Frame = 1
Query:   37 VSTAQAYPIFAQQAYSNPREANGRIACANCHLAQKPVEIETPQAVLPNSVFEAIVKIPYDNNSKQILANGKLGGLNVGAVVILPEGFKLAPKDQIPAEVKEKR----------------------------------SPDPEKDKDIYFIKYPIYVGGNRGRGQVYPSGEKSNNN-----------------KGESTIIIEAVEGKEVKQSIPAGLNLIVSEKSLVQLDQPLTKDPNVGGFGQNETEIVLQSPSRIVGYMALCFSILLCQIFLVIKKKNLKK 729
            +  ++AYPI+AQQAY+NPR ANGRIACANCHLA+KPV++E+P+AVLPN VFEA VKIPY  ++KQIL NG+L GLNVGAVVILPEGFKLAP + I  E+KEK                                   SPDP  +K I F+KYPIYVG NRGRGQ+YP+GEKSNNN                 KGE+ I +   +GKE KQ+IP GL+LI+S+K  +++DQPLTKDPNVGGFGQ + EIVLQ P+R++G++   FS+L  QIF VIKKK  +K
Sbjct:   26 IKMSEAYPIYAQQAYTNPRAANGRIACANCHLAEKPVQVESPKAVLPNKVFEAAVKIPYAKDAKQILGNGQLSGLNVGAVVILPEGFKLAPNNLISTEIKEKSKGVFISPYSPTQDNILVVGPIAGDTHQEIIFPVLSPDPATNKKINFLKYPIYVGANRGRGQIYPTGEKSNNNIVTSSFEGQVIDIETLDKGETAITLLDSKGKETKQNIPKGLSLIISKKDNIKVDQPLTKDPNVGGFGQTDVEIVLQDPNRVIGFIVFAFSVLFTQIFFVIKKKQFEK 307          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig807.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
B2XTA4_HETAK1.940e-15380.95Cytochrome f n=3 Tax=Heterosigma akashiwo TaxID=28... [more]
A0A7U0QGK4_OLILU1.250e-10356.51Cytochrome f n=1 Tax=Olisthodiscus luteus TaxID=83... [more]
A0A514CPZ6_9STRA1.780e-10157.95Cytochrome f n=1 Tax=Rhizochromulina marina TaxID=... [more]
A0A8F0F9U7_9PHAE3.240e-10155.25Cytochrome f n=1 Tax=Chorda asiatica TaxID=1281577... [more]
A0A8E5XRH3_9PHAE1.490e-10054.95Cytochrome f n=1 Tax=Ishige okamurae TaxID=233772 ... [more]
A0A2I4Q308_9PHAE5.470e-10055.67Cytochrome f n=1 Tax=Dictyopteris divaricata TaxID... [more]
A0A516ICS4_9PHAE1.070e-9955.67Cytochrome f n=32 Tax=Phaeophyceae TaxID=2870 RepI... [more]
A0A7S6U9U4_9STRA9.550e-9954.55Cytochrome f n=1 Tax=Schizocladia ischiensis TaxID... [more]
A0A8F0FB28_9PHAE1.740e-9855.67Cytochrome f n=1 Tax=Desmarestia aculeata TaxID=62... [more]
A0A6B7F215_9PHAE2.470e-9854.96Cytochrome f n=1 Tax=Cladosiphon okamuranus TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig807contigH-akashiwo_Contig807:251..1150 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D1J7B1
Preferred namepetA
PFAMsApocytochr_F_C,Apocytochr_F_N
Model size752
Max annot lvl2759|Eukaryota
KEGG koko:K02634
KEGG Pathwayko00195,ko01100,map00195,map01100
KEGG ModuleM00162
Hectar predicted targeting categorysignal peptide
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0016020,GO:0031976,GO:0031984,GO:0034357,GO:0042651,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0055035
Exons3
Evalue6.37e-98
EggNOG OGs2CMAK@1|root,2QPT8@2759|Eukaryota
Descriptionphotosynthesis
Cds size747
COG categoryC
BRITEko00000,ko00001,ko00002,ko00194
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387991.5065787-UTR-H-akashiwo_Contig807:250..2551681387991.5065787-UTR-H-akashiwo_Contig807:250..255Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig807 251..255 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387991.52077-CDS-H-akashiwo_Contig807:255..5431681387991.52077-CDS-H-akashiwo_Contig807:255..543Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig807 256..543 -
1681387991.5383713-CDS-H-akashiwo_Contig807:594..7071681387991.5383713-CDS-H-akashiwo_Contig807:594..707Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig807 595..707 -
1681387991.5489697-CDS-H-akashiwo_Contig807:804..11501681387991.5489697-CDS-H-akashiwo_Contig807:804..1150Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig807 805..1150 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig807.1.1prot_H-akashiwo_Contig807.1.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig807 256..1150 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig807.1.1

>prot_H-akashiwo_Contig807.1.1 ID=prot_H-akashiwo_Contig807.1.1|Name=mRNA_H-akashiwo_Contig807.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=249bp
IALILGFFNFTIVSTAQAYPIFAQQAYSNPREANGRIACANCHLAQKPVE
IETPQAVLPNSVFEAIVKIPYDNNSKQILANGKLGGLNVGAVVILPEGFK
LAPKDQIPAEVKEKRSPDPEKDKDIYFIKYPIYVGGNRGRGQVYPSGEKS
NNNKGESTIIIEAVEGKEVKQSIPAGLNLIVSEKSLVQLDQPLTKDPNVG
GFGQNETEIVLQSPSRIVGYMALCFSILLCQIFLVIKKKNLKKFKQLN*
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mRNA from alignment at H-akashiwo_Contig807:251..1150-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig807.1.1 ID=mRNA_H-akashiwo_Contig807.1.1|Name=mRNA_H-akashiwo_Contig807.1.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=900bp|location=Sequence derived from alignment at H-akashiwo_Contig807:251..1150- (Heterosigma akashiwo CCMP452)
ATTGCATTAATTCTAGGTTTTTTTAATTTTACAATTGTAAGTACTGCACA GGCATATCCAATTTTTGCTCAGCAAGCGTACTCAAATCCGCGTGAAGCAA ATGGTAGAATTGCTTGTGCAAACTGTCACTTAGCACAAAAACCAGTTGAG ATTGAAACTCCTCAAGCTGTTTTACCAAATTCGGTTTTTGAAGCGATTGT TAAAATTCCCTATGATAACAATTCAAAGCAAATTTTAGCAAATGGAAAAT TAGGTGGTTTAAATGTTGGTGCAGTAGTAATTTTGCCTGAAGGTTTTAAA TTGGCACCAAAAGATCAAATTCCAGCCGAAGTTAAAGAGAAAAGGTGTTT ACATTACACCTTATAGTGCTGACAATGAAAACATTTTAGTTGTTGGACCA ATTAGTGGGAATGATCACCAAGAAATTATTTTCCCAGTTTTAGCACCAGA CCCAGAAAAAGATAAAGATATTTATTTTATTAAATACCCAATCTATGTTG GGGGAAATCGTGGACGAGGACAAGTTTACCCAAGTGGAGAAAAAAGTAAT AATAACGTATATACAGCAACGGTAAGTGGTCAGATTAAGCAAATTACAGT TTCTGAGAAAGGAGAAAGTACAATTATTATTGAAGCTGTAGAAGGAAAAG AAGTTAAACAATCAATTCCAGCAGGTTTAAACTTAATTGTTTCTGAAAAA TCATTAGTGCAACTTGATCAACCATTAACTAAAGATCCAAACGTAGGTGG TTTTGGCCAAAACGAAACGGAAATTGTGTTACAAAGTCCAAGTAGAATTG TAGGTTATATGGCATTATGTTTTTCAATTTTGTTATGTCAAATTTTCTTA GTAATTAAGAAAAAAAATTTGAAAAAGTTCAAGCAGCTGAATTAAACTTC
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Coding sequence (CDS) from alignment at H-akashiwo_Contig807:251..1150-

>mRNA_H-akashiwo_Contig807.1.1 ID=mRNA_H-akashiwo_Contig807.1.1|Name=mRNA_H-akashiwo_Contig807.1.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=747bp|location=Sequence derived from alignment at H-akashiwo_Contig807:251..1150- (Heterosigma akashiwo CCMP452)
ATTGCATTAATTCTAGGTTTTTTTAATTTTACAATTGTAAGTACTGCACA
GGCATATCCAATTTTTGCTCAGCAAGCGTACTCAAATCCGCGTGAAGCAA
ATGGTAGAATTGCTTGTGCAAACTGTCACTTAGCACAAAAACCAGTTGAG
ATTGAAACTCCTCAAGCTGTTTTACCAAATTCGGTTTTTGAAGCGATTGT
TAAAATTCCCTATGATAACAATTCAAAGCAAATTTTAGCAAATGGAAAAT
TAGGTGGTTTAAATGTTGGTGCAGTAGTAATTTTGCCTGAAGGTTTTAAA
TTGGCACCAAAAGATCAAATTCCAGCCGAAGTTAAAGAGAAAAGGTCACC
AGACCCAGAAAAAGATAAAGATATTTATTTTATTAAATACCCAATCTATG
TTGGGGGAAATCGTGGACGAGGACAAGTTTACCCAAGTGGAGAAAAAAGT
AATAATAACAAAGGAGAAAGTACAATTATTATTGAAGCTGTAGAAGGAAA
AGAAGTTAAACAATCAATTCCAGCAGGTTTAAACTTAATTGTTTCTGAAA
AATCATTAGTGCAACTTGATCAACCATTAACTAAAGATCCAAACGTAGGT
GGTTTTGGCCAAAACGAAACGGAAATTGTGTTACAAAGTCCAAGTAGAAT
TGTAGGTTATATGGCATTATGTTTTTCAATTTTGTTATGTCAAATTTTCT
TAGTAATTAAGAAAAAAAATTTGAAAAAGTTCAAGCAGCTGAATTAA
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