mRNA_H-akashiwo_Contig807.1.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig807.1.1 vs. uniprot
Match: B2XTA4_HETAK (Cytochrome f n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=B2XTA4_HETAK) HSP 1 Score: 438 bits (1127), Expect = 1.940e-153 Identity = 238/294 (80.95%), Postives = 240/294 (81.63%), Query Frame = 1 Query: 1 IALILGFFNFTIVSTAQAYPIFAQQAYSNPREANGRIACANCHLAQKPVEIETPQAVLPNSVFEAIVKIPYDNNSKQILANGKLGGLNVGAVVILPEGFKLAPKDQIPAEVKEKR----------------------------------SPDPEKDKDIYFIKYPIYVGGNRGRGQVYPSGEKSNNN-----------------KGESTIIIEAVEGKEVKQSIPAGLNLIVSEKSLVQLDQPLTKDPNVGGFGQNETEIVLQSPSRIVGYMALCFSILLCQIFLVIKKKNLKK 729 IALILGFFNFTIVSTAQAYPIFAQQAYSNPREANGRIACANCHLAQKPVEIETPQAVLPNSVFEAIVKIPYDNNSKQILANGKLGGLNVGAVVILPEGFKLAPKDQIPAEVKEK +PDPEKDKDIYFIKYPIYVGGNRGRGQVYPSGEKSNNN KGESTIIIEAVEGKEVKQSIPAGLNLIVSEKSLVQLDQPLTKDPNVGGFGQNETEIVLQSPSRIVGYMALCFSILLCQIFLVIKKK +K Sbjct: 19 IALILGFFNFTIVSTAQAYPIFAQQAYSNPREANGRIACANCHLAQKPVEIETPQAVLPNSVFEAIVKIPYDNNSKQILANGKLGGLNVGAVVILPEGFKLAPKDQIPAEVKEKSKGVYITPYSADNENILVVGPISGNDHQEIIFPVLAPDPEKDKDIYFIKYPIYVGGNRGRGQVYPSGEKSNNNVYTATVSGQIKQITVSEKGESTIIIEAVEGKEVKQSIPAGLNLIVSEKSLVQLDQPLTKDPNVGGFGQNETEIVLQSPSRIVGYMALCFSILLCQIFLVIKKKQFEK 312
BLAST of mRNA_H-akashiwo_Contig807.1.1 vs. uniprot
Match: A0A7U0QGK4_OLILU (Cytochrome f n=1 Tax=Olisthodiscus luteus TaxID=83000 RepID=A0A7U0QGK4_OLILU) HSP 1 Score: 312 bits (799), Expect = 1.250e-103 Identity = 165/292 (56.51%), Postives = 195/292 (66.78%), Query Frame = 1 Query: 7 LILGFFNFTIVSTAQAYPIFAQQAYSNPREANGRIACANCHLAQKPVEIETPQAVLPNSVFEAIVKIPYDNNSKQILANGKLGGLNVGAVVILPEGFKLAPKDQIPAEVKEKR----------------------------------SPDPEKDKDIYFIKYPIYVGGNRGRGQVYPSGEKSNNN-----------------KGESTIIIEAVEGKEVKQSIPAGLNLIVSEKSLVQLDQPLTKDPNVGGFGQNETEIVLQSPSRIVGYMALCFSILLCQIFLVIKKKNLKK 729 ++ G +F+I A++YPIFAQQAYSNPREANGRI CANCHLA KPVE E PQAVLPN VFE +VKIPYD +KQILANG GGLNVGAVVILPEGFKLAP D+I AE+KEK SPDP +K + ++KYPIYVGGNRGRGQVYP+GEKSNNN K E I I++ G+ VKQ +P GL L+V E +VQ +QPL DPNVGGFGQ ETE+VLQ+P+RIVGYM FS++L Q+FLV+KKK +K Sbjct: 17 ILFGLTSFSIPDNAKSYPIFAQQAYSNPREANGRIVCANCHLASKPVEFEAPQAVLPNKVFETVVKIPYDVKNKQILANGTKGGLNVGAVVILPEGFKLAPNDKISAEIKEKNKGVYISPYSSTKDNILVVGPISGDSHREIIFPILSPDPASNKQVNYLKYPIYVGGNRGRGQVYPNGEKSNNNTYTSLAAGRISQIQKSEKNEFEITIQSNSGESVKQVVPKGLELLVKENDIVQSEQPLVIDPNVGGFGQAETEVVLQNPTRIVGYMCFAFSVILSQLFLVLKKKQFEK 308
BLAST of mRNA_H-akashiwo_Contig807.1.1 vs. uniprot
Match: A0A514CPZ6_9STRA (Cytochrome f n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A514CPZ6_9STRA) HSP 1 Score: 306 bits (785), Expect = 1.780e-101 Identity = 164/283 (57.95%), Postives = 193/283 (68.20%), Query Frame = 1 Query: 34 IVSTAQAYPIFAQQAYSNPREANGRIACANCHLAQKPVEIETPQAVLPNSVFEAIVKIPYDNNSKQILANGKLGGLNVGAVVILPEGFKLAPKDQIPAEVKEKR----------------------------------SPDPEKDKDIYFIKYPIYVGGNRGRGQVYPSGEKSNNN-----------------KGESTIIIEAVEGKEVKQSIPAGLNLIVSEKSLVQLDQPLTKDPNVGGFGQNETEIVLQSPSRIVGYMALCFSILLCQIFLVIKKKNLKK 729 I A A+PI+AQQAY+NPREANGRIACANCHLAQKPVE+ETPQAVLPNSVFE +VKIPYD NSKQILA G GGLNVGAVVILP+GFKLAP D++ E+KEK +PDPE +K I ++KYPIY GGNRGRGQV P+G+K+NNN KG ++I+ +G+++ Q IP GL+L V + V L+QPLTKDPNVGGFGQ E EIVLQSP+RI GYMALCF I+L QIFLVIKKK +K Sbjct: 28 ISEAANAFPIYAQQAYANPREANGRIACANCHLAQKPVELETPQAVLPNSVFETVVKIPYDTNSKQILAGGTKGGLNVGAVVILPDGFKLAPADKVSKEIKEKNKGVYISPYSAKAENILVVGPIPGDKHQEIIFPILAPDPETNKTINYLKYPIYAGGNRGRGQVNPTGDKTNNNAILATKAGQIVDIINVEKGGYELVIKTKDGEKISQQIPKGLDLAVLKGKTVVLEQPLTKDPNVGGFGQAEAEIVLQSPARIYGYMALCFFIVLTQIFLVIKKKQFEK 310
BLAST of mRNA_H-akashiwo_Contig807.1.1 vs. uniprot
Match: A0A8F0F9U7_9PHAE (Cytochrome f n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9U7_9PHAE) HSP 1 Score: 306 bits (783), Expect = 3.240e-101 Identity = 163/295 (55.25%), Postives = 202/295 (68.47%), Query Frame = 1 Query: 1 IALILGFFNFTI-VSTAQAYPIFAQQAYSNPREANGRIACANCHLAQKPVEIETPQAVLPNSVFEAIVKIPYDNNSKQILANGKLGGLNVGAVVILPEGFKLAPKDQIPAEVKEKR----------------------------------SPDPEKDKDIYFIKYPIYVGGNRGRGQVYPSGEKSNNN-----------------KGESTIIIEAVEGKEVKQSIPAGLNLIVSEKSLVQLDQPLTKDPNVGGFGQNETEIVLQSPSRIVGYMALCFSILLCQIFLVIKKKNLKK 729 I+ IL +FT+ + +QAYPI+AQQAY+NPR ANGRIACANCHLA+KPV+IE+P+A+LPN VFEA VKIPY ++KQIL NG+L GLNVGAVVILPEGFKLAP + I E+KEK SPDP +K I F+KYPIYVG NRGRGQ+YP+GEKSNNN KGE+ + I +GKE+KQ+IP GL+L+VS+K ++LDQPLT+DPNVGGFGQ + EIVLQ P+RI+G++A FS+L QIF VIKKK +K Sbjct: 13 ISFILIISSFTLCIQMSQAYPIYAQQAYANPRAANGRIACANCHLAEKPVQIESPKAILPNKVFEAAVKIPYAKDAKQILGNGQLSGLNVGAVVILPEGFKLAPNNLISKEIKEKNKGVYISPYSSTQDNILVVGPIAGDTHQEIIFPVLSPDPATNKKINFLKYPIYVGANRGRGQIYPTGEKSNNNIVTSSLEGQITELQVLEKGETALTITNSQGKEIKQTIPKGLSLVVSKKDNIKLDQPLTRDPNVGGFGQTDVEIVLQDPARIIGFIAFAFSVLFTQIFFVIKKKQFEK 307
BLAST of mRNA_H-akashiwo_Contig807.1.1 vs. uniprot
Match: A0A8E5XRH3_9PHAE (Cytochrome f n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRH3_9PHAE) HSP 1 Score: 304 bits (779), Expect = 1.490e-100 Identity = 161/293 (54.95%), Postives = 201/293 (68.60%), Query Frame = 1 Query: 4 ALILGFFNFTIVSTAQAYPIFAQQAYSNPREANGRIACANCHLAQKPVEIETPQAVLPNSVFEAIVKIPYDNNSKQILANGKLGGLNVGAVVILPEGFKLAPKDQIPAEVKEKR----------------------------------SPDPEKDKDIYFIKYPIYVGGNRGRGQVYPSGEKSNNN-----------------KGESTIIIEAVEGKEVKQSIPAGLNLIVSEKSLVQLDQPLTKDPNVGGFGQNETEIVLQSPSRIVGYMALCFSILLCQIFLVIKKKNLKK 729 +L GFFN+T +QAYPI+AQQAY+NPR ANGRIACANCHLA+KPV+IE+P+++LPN VF+AIVKIPY ++KQIL NG+L LNVGAVVILPEGFKLAP + I E++EK SPDP +K I F+KYPIYVG NRGRGQ+YP+GEKSNNN KGE I + EGKE+KQ++P GL+LI+S+ L+ +DQP+TKDPNVGGFGQ +TEIVLQ+P+R++G++ FSILL QIF VIKKK +K Sbjct: 23 SLSFGFFNYT----SQAYPIYAQQAYNNPRAANGRIACANCHLAEKPVQIESPKSILPNKVFDAIVKIPYAKDAKQILGNGQLSSLNVGAVVILPEGFKLAPSNLISREIQEKNKGIYISPYSSSQENILVVGPVSGDKHQEIIFPVLSPDPTTNKKINFLKYPIYVGANRGRGQIYPTGEKSNNNIVTSSYNGQVKEIQTLEKGEIIITLLDSEGKEIKQTVPKGLSLIISKNDLITVDQPITKDPNVGGFGQTDTEIVLQNPNRVLGFIIFAFSILLTQIFFVIKKKQFEK 311
BLAST of mRNA_H-akashiwo_Contig807.1.1 vs. uniprot
Match: A0A2I4Q308_9PHAE (Cytochrome f n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q308_9PHAE) HSP 1 Score: 303 bits (775), Expect = 5.470e-100 Identity = 157/282 (55.67%), Postives = 193/282 (68.44%), Query Frame = 1 Query: 37 VSTAQAYPIFAQQAYSNPREANGRIACANCHLAQKPVEIETPQAVLPNSVFEAIVKIPYDNNSKQILANGKLGGLNVGAVVILPEGFKLAPKDQIPAEVKEKR----------------------------------SPDPEKDKDIYFIKYPIYVGGNRGRGQVYPSGEKSNNN-----------------KGESTIIIEAVEGKEVKQSIPAGLNLIVSEKSLVQLDQPLTKDPNVGGFGQNETEIVLQSPSRIVGYMALCFSILLCQIFLVIKKKNLKK 729 ++ ++AYPI+AQQAY+NPR ANGRIACANCHLA+KP+EIE P+A+LPNSVFE +KIPY ++KQIL NG+L GLNVGAVVILPEGFKLAPK+ + E +EK SPDPE +K + F+KYPIYVGGNRGRGQ+YP+GEKSNNN GE+ I I +GKE KQSIP GL+L+VS+K +++DQPLTKDPNVGGFGQ +TEIVLQ P+RI+G+ FS+L QIF VIKKK +K Sbjct: 27 ITNSEAYPIYAQQAYTNPRAANGRIACANCHLAEKPIEIEAPKAILPNSVFETAIKIPYAKDAKQILGNGQLSGLNVGAVVILPEGFKLAPKNLLTKEFQEKNKGVYISPYSSTQDNILVVGPIQGETHSEIVFPILSPDPETNKKVNFLKYPIYVGGNRGRGQIYPTGEKSNNNMVTASTEGQVFEIETASNGETLISIRNSDGKETKQSIPKGLSLVVSKKDNIKVDQPLTKDPNVGGFGQMDTEIVLQDPARIIGFSLFAFSVLFTQIFFVIKKKQFEK 308
BLAST of mRNA_H-akashiwo_Contig807.1.1 vs. uniprot
Match: A0A516ICS4_9PHAE (Cytochrome f n=32 Tax=Phaeophyceae TaxID=2870 RepID=A0A516ICS4_9PHAE) HSP 1 Score: 302 bits (773), Expect = 1.070e-99 Identity = 157/282 (55.67%), Postives = 194/282 (68.79%), Query Frame = 1 Query: 37 VSTAQAYPIFAQQAYSNPREANGRIACANCHLAQKPVEIETPQAVLPNSVFEAIVKIPYDNNSKQILANGKLGGLNVGAVVILPEGFKLAPKDQIPAEVKEKR----------------------------------SPDPEKDKDIYFIKYPIYVGGNRGRGQVYPSGEKSNNN-----------------KGESTIIIEAVEGKEVKQSIPAGLNLIVSEKSLVQLDQPLTKDPNVGGFGQNETEIVLQSPSRIVGYMALCFSILLCQIFLVIKKKNLKK 729 V ++AYPI+AQQAY+NPR ANGRIACANCHLA+KPV+IE+P+A+LPN VFEA VKIPY ++KQ+L+NG+L GLNVGAVVILPEGFKLAPK+ I E++EK SPDP +K I F+KYPIYVG NRGRGQ+YP+GEKSNNN KGE++I I G E+KQ+IP GL+L+VS+K ++LDQPLTKDPNVGGFGQ + EIVLQ PSR++G++ FS+L QIF VIKKK +K Sbjct: 26 VKMSEAYPIYAQQAYTNPRAANGRIACANCHLAEKPVQIESPKAILPNKVFEAAVKIPYAKDAKQVLSNGQLSGLNVGAVVILPEGFKLAPKNLISKEIQEKSKGVYISPYSSTQDNILVVGPIAGDKNQEIIFPILSPDPATNKKINFLKYPIYVGANRGRGQIYPTGEKSNNNIVTSSSEGQIAEIKTLEKGETSITIIGSTGTEIKQTIPKGLSLVVSQKDTIKLDQPLTKDPNVGGFGQTDVEIVLQDPSRVIGFIIFAFSVLFTQIFFVIKKKQFEK 307
BLAST of mRNA_H-akashiwo_Contig807.1.1 vs. uniprot
Match: A0A7S6U9U4_9STRA (Cytochrome f n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6U9U4_9STRA) HSP 1 Score: 300 bits (767), Expect = 9.550e-99 Identity = 156/286 (54.55%), Postives = 194/286 (67.83%), Query Frame = 1 Query: 22 FNFTIVSTAQAYPIFAQQAYSNPREANGRIACANCHLAQKPVEIETPQAVLPNSVFEAIVKIPYDNNSKQILANGKLGGLNVGAVVILPEGFKLAPKDQIPAEVKEKR----------------------------------SPDPEKDKDIYFIKYPIYVGGNRGRGQVYPSGEKSNNN----------------KGESTIIIEAVEGKEVKQSIPAGLNLIVSEKSLVQLDQPLTKDPNVGGFGQNETEIVLQSPSRIVGYMALCFSILLCQIFLVIKKKNLKK 729 FN+ I + AYP++AQQAY+NPREANGRIACANCHLA+KPV+I+TPQA+LPNS+FEA V+IPY SKQIL++GK G LNVGAVVILP+ FKLAP D+I E+KEK SPDP +K + ++KYPIYVG NRGRGQ+YP+GEKSNNN E+ + I +GKE KQ+IP GLNL++S K +++DQPLTKDPNVGGFGQ ETEIVLQ+P RI+G+M FS+L+ QIF V+KKK +K Sbjct: 26 FNYDI-QNSNAYPVYAQQAYTNPREANGRIACANCHLAEKPVQIKTPQAILPNSIFEATVEIPYAKGSKQILSSGKTGSLNVGAVVILPDEFKLAPNDRISKEIKEKNKGVYISPYSSSQENILVVGPIAGDTHQEIIFPILSPDPATNKKVNYLKYPIYVGANRGRGQIYPTGEKSNNNLITSLYSGQINNIEISDKETIVTIFTPDGKEHKQNIPPGLNLLISNKESIKIDQPLTKDPNVGGFGQTETEIVLQNPKRIIGFMGFAFSVLITQIFFVLKKKQFEK 310
BLAST of mRNA_H-akashiwo_Contig807.1.1 vs. uniprot
Match: A0A8F0FB28_9PHAE (Cytochrome f n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FB28_9PHAE) HSP 1 Score: 299 bits (765), Expect = 1.740e-98 Identity = 157/282 (55.67%), Postives = 193/282 (68.44%), Query Frame = 1 Query: 37 VSTAQAYPIFAQQAYSNPREANGRIACANCHLAQKPVEIETPQAVLPNSVFEAIVKIPYDNNSKQILANGKLGGLNVGAVVILPEGFKLAPKDQIPAEVKEKR----------------------------------SPDPEKDKDIYFIKYPIYVGGNRGRGQVYPSGEKSNNN-----------------KGESTIIIEAVEGKEVKQSIPAGLNLIVSEKSLVQLDQPLTKDPNVGGFGQNETEIVLQSPSRIVGYMALCFSILLCQIFLVIKKKNLKK 729 V +QAYPI+AQQAY+NPR ANGR+ACANCHLA+KPV+IE+P+AVLPN VFEA VKIPY ++KQIL NG+L GLNVGAVVILPEGFKLAP + I E+++K SPDP +K + F+KYPIYVG NRGRGQ+YP+GEKSNNN KGE+++ I GKEV Q+IP GL+L+VS+K ++LDQPLTKDPNVGGFGQ + EIVLQ P+RI+G++ FS+LL QIF VIKKK +K Sbjct: 26 VKISQAYPIYAQQAYTNPRAANGRLACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYAKDAKQILGNGQLSGLNVGAVVILPEGFKLAPNNLISKEIQQKNKGVYISPYSSTQDNILVVGPIAGDTHQEINFPILSPDPATNKKVNFLKYPIYVGANRGRGQIYPTGEKSNNNIVTSSYGGQIIDIQTLDKGETSVTIINSSGKEVNQTIPKGLSLVVSKKDNIKLDQPLTKDPNVGGFGQTDVEIVLQDPTRIIGFIFFAFSVLLTQIFFVIKKKQFEK 307
BLAST of mRNA_H-akashiwo_Contig807.1.1 vs. uniprot
Match: A0A6B7F215_9PHAE (Cytochrome f n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7F215_9PHAE) HSP 1 Score: 298 bits (764), Expect = 2.470e-98 Identity = 155/282 (54.96%), Postives = 192/282 (68.09%), Query Frame = 1 Query: 37 VSTAQAYPIFAQQAYSNPREANGRIACANCHLAQKPVEIETPQAVLPNSVFEAIVKIPYDNNSKQILANGKLGGLNVGAVVILPEGFKLAPKDQIPAEVKEKR----------------------------------SPDPEKDKDIYFIKYPIYVGGNRGRGQVYPSGEKSNNN-----------------KGESTIIIEAVEGKEVKQSIPAGLNLIVSEKSLVQLDQPLTKDPNVGGFGQNETEIVLQSPSRIVGYMALCFSILLCQIFLVIKKKNLKK 729 + ++AYPI+AQQAY+NPR ANGRIACANCHLA+KPV++E+P+AVLPN VFEA VKIPY ++KQIL NG+L GLNVGAVVILPEGFKLAP + I E+KEK SPDP +K I F+KYPIYVG NRGRGQ+YP+GEKSNNN KGE+ I + +GKE KQ+IP GL+LI+S+K +++DQPLTKDPNVGGFGQ + EIVLQ P+R++G++ FS+L QIF VIKKK +K Sbjct: 26 IKMSEAYPIYAQQAYTNPRAANGRIACANCHLAEKPVQVESPKAVLPNKVFEAAVKIPYAKDAKQILGNGQLSGLNVGAVVILPEGFKLAPNNLISTEIKEKSKGVFISPYSPTQDNILVVGPIAGDTHQEIIFPVLSPDPATNKKINFLKYPIYVGANRGRGQIYPTGEKSNNNIVTSSFEGQVIDIETLDKGETAITLLDSKGKETKQNIPKGLSLIISKKDNIKVDQPLTKDPNVGGFGQTDVEIVLQDPNRVIGFIVFAFSVLFTQIFFVIKKKQFEK 307 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig807.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig807.1.1 >prot_H-akashiwo_Contig807.1.1 ID=prot_H-akashiwo_Contig807.1.1|Name=mRNA_H-akashiwo_Contig807.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=249bp IALILGFFNFTIVSTAQAYPIFAQQAYSNPREANGRIACANCHLAQKPVEback to top mRNA from alignment at H-akashiwo_Contig807:251..1150- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig807.1.1 ID=mRNA_H-akashiwo_Contig807.1.1|Name=mRNA_H-akashiwo_Contig807.1.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=900bp|location=Sequence derived from alignment at H-akashiwo_Contig807:251..1150- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig807:251..1150- >mRNA_H-akashiwo_Contig807.1.1 ID=mRNA_H-akashiwo_Contig807.1.1|Name=mRNA_H-akashiwo_Contig807.1.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=747bp|location=Sequence derived from alignment at H-akashiwo_Contig807:251..1150- (Heterosigma akashiwo CCMP452)back to top |