mRNA_H-akashiwo_Contig12.104.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig12.104.1 vs. uniprot
Match: A0A835ZEI2_9STRA (Flagellar associated protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEI2_9STRA) HSP 1 Score: 155 bits (393), Expect = 1.390e-45 Identity = 91/140 (65.00%), Postives = 107/140 (76.43%), Query Frame = 1
Query: 1 MSGQDWNTVTLSKNNRGLQGAAKKQANAAAARKGTLQTEARYGAKQNKSAHSNAGVNAKKLEE-SEELKHNRVDRGLSQAIQQARLAKKWTQKQLATAINEKPQVIGEYESGRAIPNPQLINKIERALGTRLPRANKKKK 417
M+GQDW+TVTL+KN AK A A A R GTLQTE R+ +NKS H+ +N KKL+E ++ LKH+RVDR L+QAIQQARL KK TQKQLAT INEKPQV+GEYESG+A+PNPQLI KIERALGTRLPR + K
Sbjct: 1 MNGQDWDTVTLAKNRAPTTKGAKNAAVATALRTGTLQTEKRWAGGENKSTHA-PHMNLKKLDEDTDNLKHDRVDRSLAQAIQQARLGKKLTQKQLATMINEKPQVVGEYESGKALPNPQLIVKIERALGTRLPRPKRASK 139
BLAST of mRNA_H-akashiwo_Contig12.104.1 vs. uniprot
Match: D8LR14_ECTSI (Flagellar associated protein, transcriptional coactivator-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LR14_ECTSI) HSP 1 Score: 155 bits (392), Expect = 1.740e-45 Identity = 90/137 (65.69%), Postives = 104/137 (75.91%), Query Frame = 1
Query: 10 QDWNTVTLSKNNRGLQGAAKKQANAAAARKGTLQTEARYGAKQNKSAHSNAGVNAKKLE-ESEELKHNRVDRGLSQAIQQARLAKKWTQKQLATAINEKPQVIGEYESGRAIPNPQLINKIERALGTRLPRANKKKK 417
QDWNTV +SK K A AAAAR GTL TE ++ A +NKS+H +N KKL+ E+EE +H RVDRGL+QAIQQARL KK TQKQLAT INEKPQV+GEYESG+AIPNPQLI+K+ERALG RLPR KK K
Sbjct: 3 QDWNTVMISKTRPTATRGQKNAATAAAARSGTLDTERKFAAGENKSSHR-GHMNMKKLDDETEEFQHTRVDRGLAQAIQQARLGKKMTQKQLATQINEKPQVVGEYESGKAIPNPQLISKLERALGVRLPRPGKKGK 138
BLAST of mRNA_H-akashiwo_Contig12.104.1 vs. uniprot
Match: A0A7S4MPQ6_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MPQ6_9STRA) HSP 1 Score: 151 bits (382), Expect = 1.830e-43 Identity = 86/141 (60.99%), Postives = 107/141 (75.89%), Query Frame = 1
Query: 4 SGQDWNTVTLSKNNRGLQGAAKKQANAAAARK--GTLQTEARYGAKQNKSAHSNAGVNAKKLEESEELKHNRVDRGLSQAIQQARLAKKWTQKQLATAINEKPQVIGEYESGRAIPNPQLINKIERALGTRLPRANKKKKA 420
SGQDW+ V + ++ + A K A A K G + TE ++GA N+SAHS +GVNAKKLEES+ELKH +VD+ LS+AI QAR+AKK TQK+LATAINEKPQVIGEYESG+AIPNPQ+I+K+ER LG +LPR KK A
Sbjct: 8 SGQDWDAVNVGRSGASGRKAVPKSAAGITAAKASGLVATERKHGAGGNRSAHSGSGVNAKKLEESDELKHAKVDKSLSKAIMQARMAKKMTQKELATAINEKPQVIGEYESGKAIPNPQIISKMERKLGCKLPRPGKKPAA 148
BLAST of mRNA_H-akashiwo_Contig12.104.1 vs. uniprot
Match: A0A6U3S3Y8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3S3Y8_9STRA) HSP 1 Score: 144 bits (362), Expect = 1.930e-40 Identity = 87/150 (58.00%), Postives = 105/150 (70.00%), Query Frame = 1
Query: 4 SGQDWNTV----------TLSKNNRGLQGAAKKQANAAAARKGTLQTEARYGAKQNKSAHSNAGVNAKKLEESEELKHNRVDRGLSQAIQQARLAKKWTQKQLATAINEKPQVIGEYESGRAIPNPQLINKIERALGTRLPRANKKKKAT 423
+GQDW V T+ K G+ QA AA G L TE ++GA N+SAHS AGVNAKKLEE++ELKH++VD+ LS+AI QAR AKK TQK LATAINEKPQVI EYESG+AIPNPQ+I+K+ER LG +LPR KK A+
Sbjct: 8 TGQDWGAVNVGSSSVRKKTVPKTAHGIT-----QAKAA----GLLATEKKFGAGGNRSAHSGAGVNAKKLEETDELKHSKVDKSLSKAIMQARTAKKLTQKDLATAINEKPQVIAEYESGKAIPNPQIISKMERKLGVKLPRPGKKPAAS 148
BLAST of mRNA_H-akashiwo_Contig12.104.1 vs. uniprot
Match: K0SSW2_THAOC (HTH cro/C1-type domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SSW2_THAOC) HSP 1 Score: 143 bits (360), Expect = 3.060e-40 Identity = 85/148 (57.43%), Postives = 106/148 (71.62%), Query Frame = 1
Query: 4 SGQDWNTVTLSKNNRGLQGAAKKQANAAAARK--GTLQTEARYGAKQNKSAHSNAGVNAKKLEESEELKHNRVDRGLSQAIQQARLAKKWTQKQLATAINEKPQVIGEYESGRAIPNPQLINKIERALGTRLPRANKKKKAT*FLGGV 441
+GQDW +V + ++ + K A + K G +QTE +YGA N SAH+ A VNA+K+EES+ELKHN+VD+ LS+AIQQAR+AKK TQK LAT INEKPQVIGEYE+G+AIPN Q+I KIERALG +LPR KK A GG
Sbjct: 8 TGQDWGSVNVGRSGAANRVKVPKSAAGVSRMKAMGIVQTERKYGAGGNASAHT-ASVNARKIEESDELKHNKVDKSLSKAIQQARMAKKMTQKDLATKINEKPQVIGEYENGKAIPNGQIIVKIERALGCKLPRPGKKPAAKKTAGGT 154
BLAST of mRNA_H-akashiwo_Contig12.104.1 vs. uniprot
Match: A0A7S2UVN6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVN6_9STRA) HSP 1 Score: 139 bits (350), Expect = 3.070e-39 Identity = 74/113 (65.49%), Postives = 92/113 (81.42%), Query Frame = 1
Query: 88 AARKGTLQTEARYGAKQNKSAHSNAGVNAKKLE-ESEELKHNRVDRGLSQAIQQARLAKKWTQKQLATAINEKPQVIGEYESGRAIPNPQLINKIERALGTRLPRANKKKKAT 423
A R G + TE ++ A +NKS H++ G N +KL+ E+EE KH+RVDR L+ AIQQARLAKK TQK LATAINEKPQ++GEYESGRAIPNPQ+I+++ERALG RLPR KKKA+
Sbjct: 14 ALRSGNVATERKFAAGENKSVHASTGKNMRKLDDETEEFKHDRVDRSLALAIQQARLAKKMTQKALATAINEKPQIVGEYESGRAIPNPQMISRMERALGVRLPRGGGKKKAS 126
BLAST of mRNA_H-akashiwo_Contig12.104.1 vs. uniprot
Match: A0A8K1CUG0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CUG0_PYTOL) HSP 1 Score: 138 bits (348), Expect = 1.000e-38 Identity = 83/142 (58.45%), Postives = 103/142 (72.54%), Query Frame = 1
Query: 1 MSGQDWNTVTLSKNNRGLQGAAKKQANAAAARK-GTLQTEARYGAKQNKSAHSNAGVNAKKLEE-SEELKHNRVDRGLSQAIQQARLAKKWTQKQLATAINEKPQVIGEYESGRAIPNPQLINKIERALGTRLPRANKKKKA 420
+ GQDW+T ++G Q K+A AR+ G + TE RY A NKS+HS A VNA+KLEE ++ KH+ VDR LSQA+ +AR KK TQKQLATAINEKPQ++ EYESGRAIPN Q+I+K+ERALG RLPR +KKKA
Sbjct: 4 VQGQDWSTAGWG--SKGPQRGVSKEAQLNQARRQGNVVTETRYNAGTNKSSHSGATVNARKLEEDTDNFKHDAVDRSLSQALMKARADKKMTQKQLATAINEKPQIVAEYESGRAIPNGQIISKLERALGCRLPRGPRKKKA 143
BLAST of mRNA_H-akashiwo_Contig12.104.1 vs. uniprot
Match: A0A3M6VA18_9STRA (HTH cro/C1-type domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VA18_9STRA) HSP 1 Score: 135 bits (339), Expect = 2.370e-37 Identity = 81/138 (58.70%), Postives = 99/138 (71.74%), Query Frame = 1
Query: 7 GQDWNTVTLSKNNRGLQGAAKKQANAAAARKGTLQTEARYGAKQNKSAHSNAGVNAKKLEE-SEELKHNRVDRGLSQAIQQARLAKKWTQKQLATAINEKPQVIGEYESGRAIPNPQLINKIERALGTRLPRANKKKK 417
GQDW+T S + +GAAK+Q A R G + TE +YGA NK AHS A +NA+KLEE ++ KH+ VDR LSQA+ +AR+AKK QKQL T INEKPQVI +YESGRAIPN Q+I K+ RALG +LPR KKKK
Sbjct: 7 GQDWDTAGWS-SRAPPRGAAKQQVLNNARRSGNVVTETKYGAGTNKGAHSGAIINARKLEEDTDNFKHDAVDRSLSQALMKARMAKKMNQKQLGTLINEKPQVIADYESGRAIPNGQIIAKLNRALGVQLPRGPKKKK 143
BLAST of mRNA_H-akashiwo_Contig12.104.1 vs. uniprot
Match: A0A6U3TVK3_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3TVK3_9STRA) HSP 1 Score: 134 bits (338), Expect = 6.260e-37 Identity = 78/140 (55.71%), Postives = 101/140 (72.14%), Query Frame = 1
Query: 4 SGQDWNTVTLSKNNRGLQGAAKKQANAAAARK-GTLQTEARYGAKQNKSAHSNAGVNAKKLEESEELKHNRVDRGLSQAIQQARLAKKWTQKQLATAINEKPQVIGEYESGRAIPNPQLINKIERALGTRLPRANKKKKA 420
+GQDW V + +++ G K A+ G L TE ++GA N+SAH+ A VNAKK+E+S+ELK N+VD+ LS+AIQQAR+AKK TQK LAT INEKPQV+GEYESG+A+PN Q+I K+ER LG +LPR KK A
Sbjct: 8 TGQDWGAVNVGRSSAGRVAVPKTAHGVTRAKAMGLLATEKKFGAGGNRSAHT-ASVNAKKIEDSDELKLNKVDKSLSKAIQQARMAKKMTQKDLATRINEKPQVVGEYESGKAVPNGQIIVKMERVLGVKLPRPGKKPAA 146
BLAST of mRNA_H-akashiwo_Contig12.104.1 vs. uniprot
Match: K3WS97_GLOUD (HTH cro/C1-type domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WS97_GLOUD) HSP 1 Score: 133 bits (335), Expect = 8.990e-37 Identity = 84/140 (60.00%), Postives = 100/140 (71.43%), Query Frame = 1
Query: 7 GQDWNTVTLSKNNRG-LQGAAKKQANAAAARKGTLQTEARYGAKQNKSAHSNAGVNAKKLEE-SEELKHNRVDRGLSQAIQQARLAKKWTQKQLATAINEKPQVIGEYESGRAIPNPQLINKIERALGTRLPRANKKKKA 420
GQDW+T S N+G GAAK Q AA R+G + EA++ A NKS+HS A VN +KLEE +E KHN VDR LSQA+ +AR KK TQK LAT INEKPQVI EYESG+AIPN Q+I K+ERALG +LPR KKK+
Sbjct: 6 GQDWSTAGWS--NKGPASGAAKSQQMNAARRQGNVVAEAKHMAGTNKSSHSGANVNMRKLEEDTETFKHNVVDRSLSQALIKARTEKKMTQKALATTINEKPQVIAEYESGKAIPNGQIIAKLERALGAKLPRGAPKKKS 143 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig12.104.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig12.104.1 >prot_H-akashiwo_Contig12.104.1 ID=prot_H-akashiwo_Contig12.104.1|Name=mRNA_H-akashiwo_Contig12.104.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=142bp MSGQDWNTVTLSKNNRGLQGAAKKQANAAAARKGTLQTEARYGAKQNKSAback to top mRNA from alignment at H-akashiwo_Contig12:4963740..4964564+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig12.104.1 ID=mRNA_H-akashiwo_Contig12.104.1|Name=mRNA_H-akashiwo_Contig12.104.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=825bp|location=Sequence derived from alignment at H-akashiwo_Contig12:4963740..4964564+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig12:4963740..4964564+ >mRNA_H-akashiwo_Contig12.104.1 ID=mRNA_H-akashiwo_Contig12.104.1|Name=mRNA_H-akashiwo_Contig12.104.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=426bp|location=Sequence derived from alignment at H-akashiwo_Contig12:4963740..4964564+ (Heterosigma akashiwo CCMP452)back to top |