prot_H-akashiwo_Contig12.104.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig12.104.1
Unique Nameprot_H-akashiwo_Contig12.104.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length142
Homology
BLAST of mRNA_H-akashiwo_Contig12.104.1 vs. uniprot
Match: A0A835ZEI2_9STRA (Flagellar associated protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEI2_9STRA)

HSP 1 Score: 153 bits (387), Expect = 2.690e-45
Identity = 91/140 (65.00%), Postives = 107/140 (76.43%), Query Frame = 0
Query:    1 MSGQDWNTVTLSKNNRGLQGAAKKQANAAAARKGTLQTEARYGAKQNKSAHSNAGVNAKKLEE-SEELKHNRVDRGLSQAIQQARLAKKWTQKQLATAINEKPQVIGEYESGRAIPNPQLINKIERALGTRLPRANKKKK 139
            M+GQDW+TVTL+KN       AK  A A A R GTLQTE R+   +NKS H+   +N KKL+E ++ LKH+RVDR L+QAIQQARL KK TQKQLAT INEKPQV+GEYESG+A+PNPQLI KIERALGTRLPR  +  K
Sbjct:    1 MNGQDWDTVTLAKNRAPTTKGAKNAAVATALRTGTLQTEKRWAGGENKSTHA-PHMNLKKLDEDTDNLKHDRVDRSLAQAIQQARLGKKLTQKQLATMINEKPQVVGEYESGKALPNPQLIVKIERALGTRLPRPKRASK 139          
BLAST of mRNA_H-akashiwo_Contig12.104.1 vs. uniprot
Match: D8LR14_ECTSI (Flagellar associated protein, transcriptional coactivator-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LR14_ECTSI)

HSP 1 Score: 153 bits (386), Expect = 3.370e-45
Identity = 90/137 (65.69%), Postives = 104/137 (75.91%), Query Frame = 0
Query:    4 QDWNTVTLSKNNRGLQGAAKKQANAAAARKGTLQTEARYGAKQNKSAHSNAGVNAKKLE-ESEELKHNRVDRGLSQAIQQARLAKKWTQKQLATAINEKPQVIGEYESGRAIPNPQLINKIERALGTRLPRANKKKK 139
            QDWNTV +SK         K  A AAAAR GTL TE ++ A +NKS+H    +N KKL+ E+EE +H RVDRGL+QAIQQARL KK TQKQLAT INEKPQV+GEYESG+AIPNPQLI+K+ERALG RLPR  KK K
Sbjct:    3 QDWNTVMISKTRPTATRGQKNAATAAAARSGTLDTERKFAAGENKSSHR-GHMNMKKLDDETEEFQHTRVDRGLAQAIQQARLGKKMTQKQLATQINEKPQVVGEYESGKAIPNPQLISKLERALGVRLPRPGKKGK 138          
BLAST of mRNA_H-akashiwo_Contig12.104.1 vs. uniprot
Match: A0A7S4MPQ6_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MPQ6_9STRA)

HSP 1 Score: 149 bits (376), Expect = 3.550e-43
Identity = 85/138 (61.59%), Postives = 106/138 (76.81%), Query Frame = 0
Query:    2 SGQDWNTVTLSKNNRGLQGAAKKQANAAAARK--GTLQTEARYGAKQNKSAHSNAGVNAKKLEESEELKHNRVDRGLSQAIQQARLAKKWTQKQLATAINEKPQVIGEYESGRAIPNPQLINKIERALGTRLPRANKK 137
            SGQDW+ V + ++    + A  K A    A K  G + TE ++GA  N+SAHS +GVNAKKLEES+ELKH +VD+ LS+AI QAR+AKK TQK+LATAINEKPQVIGEYESG+AIPNPQ+I+K+ER LG +LPR  KK
Sbjct:    8 SGQDWDAVNVGRSGASGRKAVPKSAAGITAAKASGLVATERKHGAGGNRSAHSGSGVNAKKLEESDELKHAKVDKSLSKAIMQARMAKKMTQKELATAINEKPQVIGEYESGKAIPNPQIISKMERKLGCKLPRPGKK 145          
BLAST of mRNA_H-akashiwo_Contig12.104.1 vs. uniprot
Match: A0A6U3S3Y8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3S3Y8_9STRA)

HSP 1 Score: 141 bits (356), Expect = 3.810e-40
Identity = 87/150 (58.00%), Postives = 105/150 (70.00%), Query Frame = 0
Query:    2 SGQDWNTV----------TLSKNNRGLQGAAKKQANAAAARKGTLQTEARYGAKQNKSAHSNAGVNAKKLEESEELKHNRVDRGLSQAIQQARLAKKWTQKQLATAINEKPQVIGEYESGRAIPNPQLINKIERALGTRLPRANKKKKAT 141
            +GQDW  V          T+ K   G+      QA AA    G L TE ++GA  N+SAHS AGVNAKKLEE++ELKH++VD+ LS+AI QAR AKK TQK LATAINEKPQVI EYESG+AIPNPQ+I+K+ER LG +LPR  KK  A+
Sbjct:    8 TGQDWGAVNVGSSSVRKKTVPKTAHGIT-----QAKAA----GLLATEKKFGAGGNRSAHSGAGVNAKKLEETDELKHSKVDKSLSKAIMQARTAKKLTQKDLATAINEKPQVIAEYESGKAIPNPQIISKMERKLGVKLPRPGKKPAAS 148          
BLAST of mRNA_H-akashiwo_Contig12.104.1 vs. uniprot
Match: K0SSW2_THAOC (HTH cro/C1-type domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SSW2_THAOC)

HSP 1 Score: 139 bits (349), Expect = 3.450e-39
Identity = 82/138 (59.42%), Postives = 103/138 (74.64%), Query Frame = 0
Query:    2 SGQDWNTVTLSKNNRGLQGAAKKQANAAAARK--GTLQTEARYGAKQNKSAHSNAGVNAKKLEESEELKHNRVDRGLSQAIQQARLAKKWTQKQLATAINEKPQVIGEYESGRAIPNPQLINKIERALGTRLPRANKK 137
            +GQDW +V + ++    +    K A   +  K  G +QTE +YGA  N SAH+ A VNA+K+EES+ELKHN+VD+ LS+AIQQAR+AKK TQK LAT INEKPQVIGEYE+G+AIPN Q+I KIERALG +LPR  KK
Sbjct:    8 TGQDWGSVNVGRSGAANRVKVPKSAAGVSRMKAMGIVQTERKYGAGGNASAHT-ASVNARKIEESDELKHNKVDKSLSKAIQQARMAKKMTQKDLATKINEKPQVIGEYENGKAIPNGQIIVKIERALGCKLPRPGKK 144          
BLAST of mRNA_H-akashiwo_Contig12.104.1 vs. uniprot
Match: A0A7S2UVN6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVN6_9STRA)

HSP 1 Score: 137 bits (344), Expect = 6.140e-39
Identity = 74/113 (65.49%), Postives = 92/113 (81.42%), Query Frame = 0
Query:   30 AARKGTLQTEARYGAKQNKSAHSNAGVNAKKLE-ESEELKHNRVDRGLSQAIQQARLAKKWTQKQLATAINEKPQVIGEYESGRAIPNPQLINKIERALGTRLPRANKKKKAT 141
            A R G + TE ++ A +NKS H++ G N +KL+ E+EE KH+RVDR L+ AIQQARLAKK TQK LATAINEKPQ++GEYESGRAIPNPQ+I+++ERALG RLPR   KKKA+
Sbjct:   14 ALRSGNVATERKFAAGENKSVHASTGKNMRKLDDETEEFKHDRVDRSLALAIQQARLAKKMTQKALATAINEKPQIVGEYESGRAIPNPQMISRMERALGVRLPRGGGKKKAS 126          
BLAST of mRNA_H-akashiwo_Contig12.104.1 vs. uniprot
Match: A0A8K1CUG0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CUG0_PYTOL)

HSP 1 Score: 136 bits (342), Expect = 2.000e-38
Identity = 83/142 (58.45%), Postives = 103/142 (72.54%), Query Frame = 0
Query:    1 MSGQDWNTVTLSKNNRGLQGAAKKQANAAAARK-GTLQTEARYGAKQNKSAHSNAGVNAKKLEE-SEELKHNRVDRGLSQAIQQARLAKKWTQKQLATAINEKPQVIGEYESGRAIPNPQLINKIERALGTRLPRANKKKKA 140
            + GQDW+T      ++G Q    K+A    AR+ G + TE RY A  NKS+HS A VNA+KLEE ++  KH+ VDR LSQA+ +AR  KK TQKQLATAINEKPQ++ EYESGRAIPN Q+I+K+ERALG RLPR  +KKKA
Sbjct:    4 VQGQDWSTAGWG--SKGPQRGVSKEAQLNQARRQGNVVTETRYNAGTNKSSHSGATVNARKLEEDTDNFKHDAVDRSLSQALMKARADKKMTQKQLATAINEKPQIVAEYESGRAIPNGQIISKLERALGCRLPRGPRKKKA 143          
BLAST of mRNA_H-akashiwo_Contig12.104.1 vs. uniprot
Match: A0A3M6VA18_9STRA (HTH cro/C1-type domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VA18_9STRA)

HSP 1 Score: 132 bits (333), Expect = 4.780e-37
Identity = 81/138 (58.70%), Postives = 99/138 (71.74%), Query Frame = 0
Query:    3 GQDWNTVTLSKNNRGLQGAAKKQANAAAARKGTLQTEARYGAKQNKSAHSNAGVNAKKLEE-SEELKHNRVDRGLSQAIQQARLAKKWTQKQLATAINEKPQVIGEYESGRAIPNPQLINKIERALGTRLPRANKKKK 139
            GQDW+T   S +    +GAAK+Q    A R G + TE +YGA  NK AHS A +NA+KLEE ++  KH+ VDR LSQA+ +AR+AKK  QKQL T INEKPQVI +YESGRAIPN Q+I K+ RALG +LPR  KKKK
Sbjct:    7 GQDWDTAGWS-SRAPPRGAAKQQVLNNARRSGNVVTETKYGAGTNKGAHSGAIINARKLEEDTDNFKHDAVDRSLSQALMKARMAKKMNQKQLGTLINEKPQVIADYESGRAIPNGQIIAKLNRALGVQLPRGPKKKK 143          
BLAST of mRNA_H-akashiwo_Contig12.104.1 vs. uniprot
Match: A0A6U3TVK3_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3TVK3_9STRA)

HSP 1 Score: 132 bits (332), Expect = 1.260e-36
Identity = 77/137 (56.20%), Postives = 100/137 (72.99%), Query Frame = 0
Query:    2 SGQDWNTVTLSKNNRGLQGAAKKQANAAAARK-GTLQTEARYGAKQNKSAHSNAGVNAKKLEESEELKHNRVDRGLSQAIQQARLAKKWTQKQLATAINEKPQVIGEYESGRAIPNPQLINKIERALGTRLPRANKK 137
            +GQDW  V + +++ G     K       A+  G L TE ++GA  N+SAH+ A VNAKK+E+S+ELK N+VD+ LS+AIQQAR+AKK TQK LAT INEKPQV+GEYESG+A+PN Q+I K+ER LG +LPR  KK
Sbjct:    8 TGQDWGAVNVGRSSAGRVAVPKTAHGVTRAKAMGLLATEKKFGAGGNRSAHT-ASVNAKKIEDSDELKLNKVDKSLSKAIQQARMAKKMTQKDLATRINEKPQVVGEYESGKAVPNGQIIVKMERVLGVKLPRPGKK 143          
BLAST of mRNA_H-akashiwo_Contig12.104.1 vs. uniprot
Match: K3WS97_GLOUD (HTH cro/C1-type domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WS97_GLOUD)

HSP 1 Score: 131 bits (329), Expect = 1.820e-36
Identity = 84/140 (60.00%), Postives = 100/140 (71.43%), Query Frame = 0
Query:    3 GQDWNTVTLSKNNRG-LQGAAKKQANAAAARKGTLQTEARYGAKQNKSAHSNAGVNAKKLEE-SEELKHNRVDRGLSQAIQQARLAKKWTQKQLATAINEKPQVIGEYESGRAIPNPQLINKIERALGTRLPRANKKKKA 140
            GQDW+T   S  N+G   GAAK Q   AA R+G +  EA++ A  NKS+HS A VN +KLEE +E  KHN VDR LSQA+ +AR  KK TQK LAT INEKPQVI EYESG+AIPN Q+I K+ERALG +LPR   KKK+
Sbjct:    6 GQDWSTAGWS--NKGPASGAAKSQQMNAARRQGNVVAEAKHMAGTNKSSHSGANVNMRKLEEDTETFKHNVVDRSLSQALIKARTEKKMTQKALATTINEKPQVIAEYESGKAIPNGQIIAKLERALGAKLPRGAPKKKS 143          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig12.104.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZEI2_9STRA2.690e-4565.00Flagellar associated protein n=1 Tax=Tribonema min... [more]
D8LR14_ECTSI3.370e-4565.69Flagellar associated protein, transcriptional coac... [more]
A0A7S4MPQ6_9STRA3.550e-4361.59Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A6U3S3Y8_9STRA3.810e-4058.00Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
K0SSW2_THAOC3.450e-3959.42HTH cro/C1-type domain-containing protein n=1 Tax=... [more]
A0A7S2UVN6_9STRA6.140e-3965.49Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A8K1CUG0_PYTOL2.000e-3858.45Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A3M6VA18_9STRA4.780e-3758.70HTH cro/C1-type domain-containing protein n=1 Tax=... [more]
A0A6U3TVK3_9STRA1.260e-3656.20Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
K3WS97_GLOUD1.820e-3660.00HTH cro/C1-type domain-containing protein n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001387Cro/C1-type helix-turn-helix domainSMARTSM00530mbf_short4coord: 79..134
e-value: 5.4E-12
score: 55.8
IPR001387Cro/C1-type helix-turn-helix domainPFAMPF01381HTH_3coord: 80..131
e-value: 2.9E-13
score: 49.7
IPR001387Cro/C1-type helix-turn-helix domainPROSITEPS50943HTH_CROC1coord: 80..134
score: 13.766717
IPR001387Cro/C1-type helix-turn-helix domainCDDcd00093HTH_XREcoord: 77..131
e-value: 7.39495E-11
score: 52.1702
IPR013729Multiprotein bridging factor 1, N-terminalPFAMPF08523MBF1coord: 4..72
e-value: 1.4E-10
score: 41.4
IPR010982Lambda repressor-like, DNA-binding domain superfamilyGENE3D1.10.260.40coord: 63..141
e-value: 6.2E-27
score: 94.9
IPR010982Lambda repressor-like, DNA-binding domain superfamilySUPERFAMILY47413lambda repressor-like DNA-binding domainscoord: 76..131
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..54
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..72
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..72
NoneNo IPR availablePANTHERPTHR10245:SF15ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1coord: 1..139
NoneNo IPR availablePANTHERPTHR10245ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1coord: 1..139

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig12contigH-akashiwo_Contig12:4963740..4964446 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig12.104.1mRNA_H-akashiwo_Contig12.104.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig12 4963740..4964564 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig12.104.1 ID=prot_H-akashiwo_Contig12.104.1|Name=mRNA_H-akashiwo_Contig12.104.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=142bp
MSGQDWNTVTLSKNNRGLQGAAKKQANAAAARKGTLQTEARYGAKQNKSA
HSNAGVNAKKLEESEELKHNRVDRGLSQAIQQARLAKKWTQKQLATAINE
KPQVIGEYESGRAIPNPQLINKIERALGTRLPRANKKKKAT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001387Cro/C1-type_HTH
IPR013729MBF1_N
IPR010982Lambda_DNA-bd_dom_sf