mRNA_H-akashiwo_Contig113.3.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig113.3.1 vs. uniprot
Match: A0A8D9E8V4_9HEMI (DNA-directed DNA polymerase n=3 Tax=Cacopsylla melanoneura TaxID=428564 RepID=A0A8D9E8V4_9HEMI) HSP 1 Score: 131 bits (330), Expect = 2.600e-32 Identity = 69/171 (40.35%), Postives = 99/171 (57.89%), Query Frame = 1
Query: 4 EQFIEFIMLPENESALLIAHYSSGFDGQFLLREAIGGEYFVPGNTKPPVL-KGQKIMTAQIQNQCRLVDSYNFVGAPLSSFTKIFDLNPEYSKGYFPHLFSCSKNMGVIGPIPAAEYYQPNQMSEAGRKKFLEWHHEQVENKVKFDFRKDCESYCQMDVTVLREGMLALRE 513
++F E+++ E++ IAHY+ G+D F+L EY V + KP + G K+M+ + + R++DS NFV APLS+F K F L E KGYFPH F+ +N G IP ++Y P M + R++FL+WH E+V FDF K+ E YC DV +LR L RE
Sbjct: 598 DEFCEWLISKEHKKYTAIAHYARGYDSHFIL------EYCVRNSIKPKTITNGTKLMSLEA-GKVRIIDSSNFVAAPLSTFPKTFGLK-ELKKGYFPHYFNTVENQSYKGSIPDVKFYSPETMKPSAREEFLKWHAERVSENYYFDFAKELEEYCSSDVDILRRSCLIFRE 760
BLAST of mRNA_H-akashiwo_Contig113.3.1 vs. uniprot
Match: A0A8D8QVL6_9HEMI (DNA-directed DNA polymerase (Fragment) n=1 Tax=Cacopsylla melanoneura TaxID=428564 RepID=A0A8D8QVL6_9HEMI) HSP 1 Score: 125 bits (314), Expect = 3.270e-30 Identity = 67/161 (41.61%), Postives = 92/161 (57.14%), Query Frame = 1
Query: 34 ENESALLIAHYSSGFDGQFLLREAIGGEYFVPGNTKPPVL-KGQKIMTAQIQNQCRLVDSYNFVGAPLSSFTKIFDLNPEYSKGYFPHLFSCSKNMGVIGPIPAAEYYQPNQMSEAGRKKFLEWHHEQVENKVKFDFRKDCESYCQMDVTVLREGMLALRE 513
E++ IAHY+ G+D F+L EY V + KP + G K+M+ + + R++DS NFV APLS+F K F L E KGYFPH F+ +N G IP ++Y P M + R++FL+WH E+V FDF K+ E YC DV +LR L RE
Sbjct: 3 EHKKYTAIAHYARGYDSHFIL------EYCVRNSIKPKTITNGTKLMSLEA-GKVRIIDSSNFVAAPLSTFPKTFGLK-ELKKGYFPHYFNTVENQSYKGSIPDVKFYSPETMKPSAREEFLKWHAERVSENYYFDFAKELEEYCSSDVDILRRSCLIFRE 155
BLAST of mRNA_H-akashiwo_Contig113.3.1 vs. uniprot
Match: UPI0008F99D8C (uncharacterized protein LOC109034071 n=1 Tax=Bemisia tabaci TaxID=7038 RepID=UPI0008F99D8C) HSP 1 Score: 122 bits (305), Expect = 6.020e-29 Identity = 66/172 (38.37%), Postives = 98/172 (56.98%), Query Frame = 1
Query: 4 EQFIEFIMLPENE--SALLIAHYSSGFDGQFLLREAIGGEYFVPGNTKPPVLKGQKIMTAQIQNQCRLVDSYNFVGAPLSSFTKIFDLNP-EYSKGYFPHLFSCSKNMGVIGPIPAAEYYQPNQMSEAGRKKFLEWHHEQVENKVKFDFRKDCESYCQMDVTVLREGMLALR 510
++FI + P+ S +AHY SG+D F+LR E + P + G K+M +I N +DS NF+ APLS K+ + E +KGYFPH+F+ +N G +GP+P E Y P+ MS+AGR+ FL W+ ++VE FDF K+ YC++DV +L + L R
Sbjct: 735 KEFIAHLRQPKQHFSSITCVAHYGSGYDFHFILRVLAVEEGWTPAM----ISNGAKLMRVKIGN-ITFIDSLNFLCAPLSKLPKMMSIGDGELNKGYFPHMFNRPENAGYVGPMPPVEMYTPDDMSDAGRRAFLSWYEQKVEEDHVFDFDKELLFYCKLDVEILAKACLKFR 901
BLAST of mRNA_H-akashiwo_Contig113.3.1 vs. uniprot
Match: A0A534A3N4_9GAMM (DNA-directed DNA polymerase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A534A3N4_9GAMM) HSP 1 Score: 115 bits (288), Expect = 1.140e-26 Identity = 62/169 (36.69%), Postives = 91/169 (53.85%), Query Frame = 1
Query: 10 FIEFIMLPEN--ESALLIAHYSSGFDGQFLLREAIGGEYFVPGNTKPPVLKGQKIMTAQIQNQCRLVDSYNFVGAPLSSFTKIFDLNPEYSKGYFPHLFSCSKNMGVIGPIPAAEYYQPNQMSEAGRKKFLEWHHEQVENKVKFDFRKDCESYCQMDVTVLREGMLALR 510
F++++M + +IAH GFD QFLL+ + P +++G KI+ +I N R +DS ++ LS+ K FDL PE KGYFPHLF+ N +GPIPA E+Y P+ M E F W+++QV +FDF+ + YC DV +L + L R
Sbjct: 478 FMDYVMKARKPFKDVCVIAHNGQGFDFQFLLKYVLEQTKHTPDL----IMRGTKIILMEIDN-VRFIDSLSYFPMALSALPKAFDLPPEKKKGYFPHLFNTEANQNYVGPIPAKEFYCPDNMFEENYGDFEIWYNQQVNENYRFDFQHELVDYCVSDVDILAQACLKFR 641
BLAST of mRNA_H-akashiwo_Contig113.3.1 vs. uniprot
Match: A0A1B6JL89_9HEMI (DNA-directed DNA polymerase (Fragment) n=1 Tax=Homalodisca liturata TaxID=320908 RepID=A0A1B6JL89_9HEMI) HSP 1 Score: 106 bits (264), Expect = 3.700e-26 Identity = 50/121 (41.32%), Postives = 69/121 (57.02%), Query Frame = 1
Query: 148 VLKGQKIMTAQIQNQCRLVDSYNFVGAPLSSFTKIFDLNPEYSKGYFPHLFSCSKNMGVIGPIPAAEYYQPNQMSEAGRKKFLEWHHEQVENKVKFDFRKDCESYCQMDVTVLREGMLALR 510
+++G K++ ++ N R +DS N+ LS+ K FDL PE KGYFPHLF+ N +GPIP EYY P M E F WH++QV V FDF+K+ YC DV +L + + R
Sbjct: 16 IMRGTKVILMELDN-VRFIDSLNYFPMALSALNKAFDLPPEKKKGYFPHLFNTLANQNYVGPIPPKEYYCPESMFEKSYTDFENWHNDQVNKNVVFDFQKELIEYCISDVEILAQACIKFR 135
BLAST of mRNA_H-akashiwo_Contig113.3.1 vs. uniprot
Match: A0A653DC59_CALMS (DNA-directed DNA polymerase n=1 Tax=Callosobruchus maculatus TaxID=64391 RepID=A0A653DC59_CALMS) HSP 1 Score: 112 bits (280), Expect = 1.310e-25 Identity = 60/155 (38.71%), Postives = 84/155 (54.19%), Query Frame = 1
Query: 52 LIAHYSSGFDGQFLLREAIGGEYFVPGNTKPPVLKGQKIMTAQIQNQCRLVDSYNFVGAPLSSFTKIFDLNPEYSKGYFPHLFSCSKNMGVIGPIPAAEYYQPNQMS-EAGRKKFLEWHHEQVENKVKFDFRKDCESYCQMDVTVLREGMLALRE 513
+IAH GFD QF+L + F P +++G K+++ + N + +DS N+ LS K F E SKGYFPHLF+CS N +GPIPA E+Y P+ + E R + L+WH E V FDF+ + YC DV +L + L RE
Sbjct: 161 VIAHNGGGFDHQFVLNYILTSTDFTPDL----IMRGTKLISMTVGN-VKFLDSLNYFNMALSKLPKAFGF-AELSKGYFPHLFNCSANKNYVGPIPALEFYNPDNLKDEKARNELLKWHSEMVAQNYVFDFQNEITQYCVSDVDILTQSCLKFRE 309
BLAST of mRNA_H-akashiwo_Contig113.3.1 vs. uniprot
Match: V5G0H8_ANOGL (DNA-directed DNA polymerase (Fragment) n=1 Tax=Anoplophora glabripennis TaxID=217634 RepID=V5G0H8_ANOGL) HSP 1 Score: 110 bits (274), Expect = 2.570e-25 Identity = 58/173 (33.53%), Postives = 91/173 (52.60%), Query Frame = 1
Query: 1 LEQFIEFIMLPENE--SALLIAHYSSGFDGQFLLREAIGGEYFVPGNTKPPVLKGQKIMTAQIQNQCRLVDSYNFVGAPLSSFTKIFDLNPEYSKGYFPHLFSCSKNMGVIGPIPAAEYYQPNQMSEAGRKKFLEWHHEQVENKVKFDFRKDCESYCQMDVTVLREGMLALRE 513
++ F+++++ + +++AH FD QF L + P +++G KI++ + N + +DS N+ LS K F L + KGYFPHLF+ N +GP+PAAEYY P+ M R KFLEWH E +++ FD ++D YC DV +L L R+
Sbjct: 57 IDNFLKYVLAARKKFKQVVVVAHNGQAFDHQFCLNYILTKTDLTP----ELIMRGTKIISMVVGN-VKFLDSLNYFPMALSKLPKAFGLGNNFKKGYFPHLFNTVANANYVGPLPAAEYYDPDNMKPEDRSKFLEWHEEHRDDE--FDMQRDLVEYCISDVEILTAACLKFRQ 222
BLAST of mRNA_H-akashiwo_Contig113.3.1 vs. uniprot
Match: UPI0008750553 (uncharacterized protein LOC108913463 n=1 Tax=Anoplophora glabripennis TaxID=217634 RepID=UPI0008750553) HSP 1 Score: 106 bits (264), Expect = 1.890e-23 Identity = 57/163 (34.97%), Postives = 84/163 (51.53%), Query Frame = 1
Query: 25 MLPENESALLIAHYSSGFDGQFLLREAIGGEYFVPGNTKPPVLKGQKIMTAQIQNQCRLVDSYNFVGAPLSSFTKIFDLNPEYSKGYFPHLFSCSKNMGVIGPIPAAEYYQPNQMSEAGRKKFLEWHHEQVENKVKFDFRKDCESYCQMDVTVLREGMLALRE 513
M + + +++AH FD QF L + P +++G KI++ + N + +DS N+ LS K F L KGYFPHLF+ ++N +GP+P AEYY P+ M KFLEWH E +++ F+ R+D YC DV +L L RE
Sbjct: 450 MREKFKQVVVVAHNGQAFDHQFCLNYILTKTDLTP----ELIMRGTKIISMVVGN-VKFLDSLNYFPMALSRLPKAFGLGNNLKKGYFPHLFNTAENQNYVGPLPVAEYYDPDNMKPEDHSKFLEWHEEHKDDE--FNMRRDLVEYCISDVEILTAACLKFRE 605
BLAST of mRNA_H-akashiwo_Contig113.3.1 vs. uniprot
Match: UPI000C7654FF (uncharacterized protein LOC108911068 n=1 Tax=Anoplophora glabripennis TaxID=217634 RepID=UPI000C7654FF) HSP 1 Score: 105 bits (263), Expect = 2.550e-23 Identity = 57/163 (34.97%), Postives = 85/163 (52.15%), Query Frame = 1
Query: 25 MLPENESALLIAHYSSGFDGQFLLREAIGGEYFVPGNTKPPVLKGQKIMTAQIQNQCRLVDSYNFVGAPLSSFTKIFDLNPEYSKGYFPHLFSCSKNMGVIGPIPAAEYYQPNQMSEAGRKKFLEWHHEQVENKVKFDFRKDCESYCQMDVTVLREGMLALRE 513
M + + +++AH FD QF L + P +++G KI++ ++N + +DS N+ LS K F L KGYFPHLF+ + N +GP+PAAEYY P+ M R KFLEWH E ++ F+ ++D YC DV +L L R+
Sbjct: 325 MRKKFKQVVVMAHNGQAFDHQFCLNYILTQTDLTP----ELIMRGTKIISMVMEN-VKFLDSLNYFPMALSKLPKAFGLGDNLKKGYFPHLFNTAANANYVGPLPAAEYYDPDNMKPEDRSKFLEWHEEHKNDE--FNMQRDLVEYCISDVEILTAACLKFRQ 480
BLAST of mRNA_H-akashiwo_Contig113.3.1 vs. uniprot
Match: UPI000C77AB1C (uncharacterized protein LOC111692541 n=1 Tax=Anoplophora glabripennis TaxID=217634 RepID=UPI000C77AB1C) HSP 1 Score: 105 bits (263), Expect = 2.580e-23 Identity = 58/163 (35.58%), Postives = 84/163 (51.53%), Query Frame = 1
Query: 25 MLPENESALLIAHYSSGFDGQFLLREAIGGEYFVPGNTKPPVLKGQKIMTAQIQNQCRLVDSYNFVGAPLSSFTKIFDLNPEYSKGYFPHLFSCSKNMGVIGPIPAAEYYQPNQMSEAGRKKFLEWHHEQVENKVKFDFRKDCESYCQMDVTVLREGMLALRE 513
M + + +++AH FD QF L + P +++G KI++ + N + +DS N+ LS K F L + K YFPHLF+ S N +GP+PAAEYY P+ M R KFLEWH E ++ FD ++D YC DV +L L R+
Sbjct: 454 MRKKFKQVVVMAHNGQAFDHQFCLNYILTQTNLTP----ELIMRGTKIISMVVGN-VKFLDSLNYFPMALSKLPKAFGLGNNFKKSYFPHLFNTSANADYVGPLPAAEYYDPDNMKAEDRAKFLEWHEEHRDDV--FDMQRDLVEYCISDVEILTAACLKFRQ 609 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig113.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig113.3.1 >prot_H-akashiwo_Contig113.3.1 ID=prot_H-akashiwo_Contig113.3.1|Name=mRNA_H-akashiwo_Contig113.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=163bp MLPENESALLIAHYSSGFDGQFLLREAIGGEYFVPGNTKPPVLKGQKIMTback to top mRNA from alignment at H-akashiwo_Contig113:895369..895881+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig113.3.1 ID=mRNA_H-akashiwo_Contig113.3.1|Name=mRNA_H-akashiwo_Contig113.3.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=513bp|location=Sequence derived from alignment at H-akashiwo_Contig113:895369..895881+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig113:895369..895881+ >mRNA_H-akashiwo_Contig113.3.1 ID=mRNA_H-akashiwo_Contig113.3.1|Name=mRNA_H-akashiwo_Contig113.3.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=489bp|location=Sequence derived from alignment at H-akashiwo_Contig113:895369..895881+ (Heterosigma akashiwo CCMP452)back to top |