mRNA_H-akashiwo_Contig108.13.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig108.13.1 vs. uniprot
Match: A0A6U3ZPA9_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3ZPA9_9STRA) HSP 1 Score: 296 bits (758), Expect = 6.860e-97 Identity = 150/259 (57.92%), Postives = 193/259 (74.52%), Query Frame = 1 Query: 7 LFAAGGAPQYEKLDAVLQEAKFLGEGTVILHIDTLGKSIEYKPGHVLALEIEGDSTTV--VETKTTQDMADNGGWMRGPYTVSRATETSFDVLIKVVGEKSKRFASAQPGTALRFGGKFKVPIIEGVKGNDVDRVVFISTGVGAGPCVGAIETALTKKSPFPPIQLVASYRHNAEVLYKDHLDALSMEYPESFVWTPIVTSEVGRVSANEENLKSITLSPFGEACCLGATHYHLIGNGQLVNEFKAGLAKAGVPDERVT 777 L+AA G PQY+K A L EA+ +GEG+ +LHIDT +EY+PGHVLALE+E + V++KT++D NGGWMRGPYTVSR+T+ S D+L+KVVGEKSK F+ A PGT LRFGGKFK+PI+EG+ + RVV ISTGVG GPCVGAIE A+ ++S FPPI L+ASYR E++YKDHL+ L E+ + F W I+TSE GR+S+ +NL+ +T + F L THYHLIGNGQ+V+EFKAGL AGV D++VT Sbjct: 30 LYAADGPPQYDKFQATLSEAEKVGEGSFMLHIDT-EDVVEYEPGHVLALEMEAPNADGDDVDSKTSEDAKQNGGWMRGPYTVSRSTDKSIDILVKVVGEKSKLFSIATPGTPLRFGGKFKLPIVEGIDTDTTKRVVLISTGVGVGPCVGAIEKAIEQES-FPPIDLIASYRTEDEIVYKDHLEKLQKEHADKFSWKAIITSEQGRISSTADNLRVLTDTNFKSG--LEDTHYHLIGNGQMVSEFKAGLQAAGVKDDKVT 284
BLAST of mRNA_H-akashiwo_Contig108.13.1 vs. uniprot
Match: A0A7S2EHX0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EHX0_9STRA) HSP 1 Score: 293 bits (749), Expect = 6.100e-96 Identity = 147/238 (61.76%), Postives = 184/238 (77.31%), Query Frame = 1 Query: 7 LFAAGGAPQYEKLDAVLQEAKFLGEGTVILHIDTLGKSIEYKPGHVLALEIEGDSTTVVETKTTQDMADNGGWMRGPYTVSRATETSFDVLIKVVGEKSKRFASAQPGTALRFGGKFKVPIIEGV-KGNDVDRVVFISTGVGAGPCVGAIETALTKKSP----FPPIQLVASYRHNAEVLYKDHLDALSMEYPESFVWTPIVTSEVGRVSANEENLKSITLSPFGEACCLGATHYHLI 705 L+A GGAPQY+K+DAVL++A+ +G+G+V+LHIDT SIEY+PGHVLALEI+G+ +++KT DM +N GWMRGPYTVSR+TE S DVL+KVVG+KSKRFASA+PGTAL+FGGKFKVPIIEG+ G +V RVV +STGVG GPC+GAIE L + S FP ++L ASYR E++YKDHLD L E+PE F+W IV+SE GR+S+NEENL + S F L THYHLI Sbjct: 51 LYAEGGAPQYDKIDAVLRQAEVVGDGSVMLHIDTT-TSIEYEPGHVLALEIKGNDDDDIDSKTADDMKNNRGWMRGPYTVSRSTEKSLDVLLKVVGDKSKRFASAKPGTALKFGGKFKVPIIEGIANGENVKRVVLLSTGVGVGPCIGAIEKVLLEGSEDFANFPTVELYASYRTEREIVYKDHLDTLQNEHPERFLWKAIVSSESGRISSNEENLNCLFSSAFARDSSLHDTHYHLI 287
BLAST of mRNA_H-akashiwo_Contig108.13.1 vs. uniprot
Match: A0A7S3Q842_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q842_9STRA) HSP 1 Score: 294 bits (752), Expect = 8.770e-96 Identity = 151/270 (55.93%), Postives = 197/270 (72.96%), Query Frame = 1 Query: 7 LFAAGGAPQYEKLDAVLQEAKFLGEGTVILHIDTLGK---SIEYKPGHVLALEIEGDSTT-------VVETKTTQDMADNGGWMRGPYTVSRATETSFDVLIKVVGEKSKRFASAQPGTALRFGGKFKVPIIEGVKGNDVDRVVFISTGVGAGPCVGAIETALTKK---SPFPPIQLVASYRHNAEVLYKDHLDALSMEYPESFVWTPIVTSEVGRVSANEENLKSITLSPFGEACCLGATHYHLIGNGQLVNEFKAGLAKAGVPDERVT 777 +FA GG PQY+K+DAVL+EA+ +GEG V+LH+D K +I+Y+PGHV+ALEIE + K ++D +N GWMRGPYTVSRAT S D+LIKVVG+KS+RF++A PGT L+FGGKFKVPI+EG++ +V VV +STGVG GPC+GAIE AL+++ + FPPI+L+ASYR +EV Y DHL+ L E+P+SF W +VTS GR+S++ ENL+ + E THYHLIGNGQ+V+EFK GLAKAGV DERVT Sbjct: 33 IFAEGGPPQYDKIDAVLREAEVVGEGCVMLHMDVKDKDTVTIDYEPGHVVALEIEEVESPSXXXXXXXXXXKNSEDAKNNSGWMRGPYTVSRATADSLDILIKVVGDKSERFSNASPGTPLKFGGKFKVPILEGIQTEEVKNVVLLSTGVGVGPCIGAIEKALSEEYESNNFPPIKLIASYRKESEVAYTDHLNKLQDEHPKSFSWNSVVTSVDGRLSSSTENLEKFLNASSSE------THYHLIGNGQMVSEFKEGLAKAGVSDERVT 296
BLAST of mRNA_H-akashiwo_Contig108.13.1 vs. uniprot
Match: A0A7S1VNF9_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VNF9_9STRA) HSP 1 Score: 271 bits (692), Expect = 8.400e-87 Identity = 141/267 (52.81%), Postives = 189/267 (70.79%), Query Frame = 1 Query: 7 LFAAGGAPQYEKLDAVLQEAKFLGEGTVILHIDTLGKSIEYKPGHVLALEIEGDSTTVVETKTTQDMADNGGWMRGPYTVSRATE---------TSFDVLIKVVGEKSKRFASAQPGTALRFGGKFKVPIIEGVKGNDVDRVVFISTGVGAGPCVGAIETALTKKSPFPPIQLVASYRHNAEVLYKDHLDALSMEYPESFVWTPIVTSEV-GRVSANEENLKSITLSPFGEACCLGATHYHLIGNGQLVNEFKAGLAKAGVPDERVT 777 L AA GAPQY+K+DA+LQ+++ + EGT +LH+ + ++YKPG+VLALE++ S + + D NGGWMRGPYTVSR T + DV+I+VVG+KSK FA ++PGT +RFGGKFKVPI++G+ +V +VV +STGVG GPCVGAIE A +S FPPI L SYR EV YK+HLD ++++ P F W PI+TSE GR+S++++N+ +T S E + THYHLIGNGQ+V+E+KAGL KAGVP ERVT Sbjct: 31 LKAADGAPQYDKIDAILQQSEKIAEGTYMLHVQVPNQELDYKPGNVLALELQDTSGDLND-----DAKKNGGWMRGPYTVSRYTSNYDSAEGQSSLLDVMIRVVGKKSKAFAESEPGTPVRFGGKFKVPILDGIDKEEVKKVVLLSTGVGVGPCVGAIELARQDES-FPPIALFPSYREWNEVAYKEHLDEIALKNPGKFEWNPIITSEKSGRISSSKKNMDMVTASI--EGLGIAETHYHLIGNGQMVSEWKAGLDKAGVPKERVT 289
BLAST of mRNA_H-akashiwo_Contig108.13.1 vs. uniprot
Match: K0T975_THAOC (FAD-binding FR-type domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T975_THAOC) HSP 1 Score: 264 bits (675), Expect = 3.220e-84 Identity = 140/262 (53.44%), Postives = 183/262 (69.85%), Query Frame = 1 Query: 1 SCLFAAGGAPQYEKLDAVLQEAKFLGEGTVILHIDTLGKSIEYKPGHVLALEIEGDSTTVV---ETKTTQDMADNGGWMRGPYTVSRATETSFDVLIKVVGEKSKRFASAQPGTALRFGGKFKVPIIEGVKGNDVDRVVFISTGVGAGPCVGAIETALTKKSPFPPIQLVASYRHNAEVLYKDHLDALSMEYPESFVWTPIVTSEVGRVSANEENLKSITLSPFGEACCLGATHYHLIGNGQLVNEFKAGLAKAGVPDERVT 777 S L AA P+Y+K++ L+EA+ + G+V+LHIDTL +SI+Y+PGHVLALEIE D T E+KT +D NGGWMRGPYTVSR +E +VLIKVVG KS+RF SA+PGT ++FGG+F VPI++G+ DRVV ISTGVG GPC+GAIE AL + S PPI L+ASYR EV+ D LD++ +P F W I+T GR+SANE+NL+ + S F + + TH+HLIGN LV E KAGL + GVP +++ Sbjct: 34 SSLCAANEPPKYDKIEGTLREAEEVATGSVMLHIDTL-ESIDYRPGHVLALEIEMDETQRPLDKESKTYKDAQANGGWMRGPYTVSRCSERKLNVLIKVVGTKSRRFQSAEPGTKVKFGGRFHVPILDGIDVASTDRVVMISTGVGVGPCIGAIEMAL-EDSFRPPIDLIASYRSQDEVVCGDILDSMQQSHPSKFAWKSIITELDGRLSANEDNLRLVFESNFDAS--VERTHFHLIGNAALVGEMKAGLEEGGVPPSKIS 291
BLAST of mRNA_H-akashiwo_Contig108.13.1 vs. uniprot
Match: A0A7S3VB97_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VB97_9STRA) HSP 1 Score: 239 bits (610), Expect = 1.220e-73 Identity = 118/200 (59.00%), Postives = 152/200 (76.00%), Query Frame = 1 Query: 187 TKTTQDMADNGGWMRGPYTVSRATETSFDVLIKVVGEKSKRFASAQPGTALRFGGKFKVPIIEGVKGNDVDRVVFISTGVGAGPCVGAIETALTKK---SPFPPIQLVASYRHNAEVLYKDHLDALSMEYPESFVWTPIVTSEVGRVSANEENLKSITLSPFGEACCLGATHYHLIGNGQLVNEFKAGLAKAGVPDERVT 777 +K ++D +N GWMRGPYTVSRAT S D+LIKVVG+KS+RF++A PGT L+FGGKFKVPI+EG++ +V VV +STGVG GPC+GAIE AL+++ + FPPI+L+ASYR +EV Y DHL+ L E+P+SF W +VTS GR+S++ ENL+ + E THYHLIGNGQ+V+EFK GLAKAGV DERVT Sbjct: 157 SKNSEDAKNNSGWMRGPYTVSRATADSLDILIKVVGDKSERFSNASPGTPLKFGGKFKVPILEGIQTEEVKNVVLLSTGVGVGPCIGAIEKALSEEYESNNFPPIKLIASYRKESEVAYTDHLNKLQDEHPKSFSWNSVVTSVDGRLSSSTENLEKFLNASSSE------THYHLIGNGQMVSEFKEGLAKAGVSDERVT 350
BLAST of mRNA_H-akashiwo_Contig108.13.1 vs. uniprot
Match: A0A7S2UBV9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UBV9_9STRA) HSP 1 Score: 227 bits (579), Expect = 9.660e-71 Identity = 117/207 (56.52%), Postives = 156/207 (75.36%), Query Frame = 1 Query: 1 SCLFAAGGAPQYEKLDAVLQEAKFLGEGTVILHIDTLGKSIEYKPGHVLALEIEGDSTTVVETKTTQDMADNGGWMRGPYTVSRATETSFDVLIKVVGEKSKRFASAQPGTALRFGGKFKVPIIEGVKGNDVDRVVFISTGVGAGPCVGAIETALTKKSPFPPIQLVASYRHNAEVLYKDHLDALSMEYPESFVWTPIVTSEVGRVS 621 S LFA GGAPQY+K++AVL+ A+ L +G+V+LHI T +I+Y+PG+VLALEIEG+ + E + +D NGG++RGPYTVSRATE S D+LIKVVG+KSK FA+A+ GT ++FGGKFKVPI+EG++ + RVV ISTGVG GPCVGA+E AL K FPP++L A YR++ E++Y +LD L E F W +V+SE GR+S Sbjct: 46 SKLFAEGGAPQYDKIEAVLKHAEVLSKGSVMLHIAT-DTAIDYQPGNVLALEIEGN-LNLSELEEKEDAKTNGGFLRGPYTVSRATEKSLDILIKVVGDKSKMFANAEAGTPVKFGGKFKVPIVEGIQKEETKRVVLISTGVGVGPCVGAVEEAL-KDDSFPPVELCACYRNSDEIVYGTYLDELQAENLGRFSWKAVVSSESGRLS 249
BLAST of mRNA_H-akashiwo_Contig108.13.1 vs. uniprot
Match: A0A448ZQK5_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZQK5_9STRA) HSP 1 Score: 199 bits (506), Expect = 7.340e-58 Identity = 130/298 (43.62%), Postives = 169/298 (56.71%), Query Frame = 1 Query: 25 APQYEKLDAVLQEAKFLGEGTVILHIDTLGKSIE-YKPGHVLALEIEG------DSTTVVET-----KTTQDMADNGGWMRGPYTVSRATETS-----------FDVLIKVVGEKSKRFASAQPGTALRFGGKFKVPIIEGV----KGNDVD------RVVFISTGVGAGPCVGAIETALT-------KKSPFPPIQLVASYRHNAEVLYKDHLDALSMEY----PESFVWTPIVTSEVGRVSAN-EENLKSITLSP-FGEACCLGATHYHLIGNGQLVNEFKAGLAKAGVPDERVTT 780 +PQY+K + +L+ ++ +G+G+ +L+ID + YKPGHVLALEI+ D V ET KT +DM N GWMRGPYTVSR TS F VL+K VG KS F++ GT +R+GGKFKVPI EG+ + ND + RV+ +STGVG GPC+GA E + K+S I LV S+R E+ LD L + PE F W I+T E GR+SA+ E L +SP + THYH+IGNGQLVNE+ AGL +AGVP RVTT Sbjct: 62 SPQYQKQEGILRRSECVGKGSYLLYIDCVDDDTNGYKPGHVLALEIQPPAVDGCDDVEVSETMTMNEKTRKDMEANEGWMRGPYTVSRGYGTSSEINGKAKNDGFQVLVKEVGYKSHVFSTCPEGTPVRYGGKFKVPIAEGILEAAETNDSEDRGATKRVIMVSTGVGVGPCLGASEILVNMLTSSDAKESTIHSINLVTSFRTREEIAMASDLDKLQQQQQGRNPE-FHWESIITGETGRLSASGPECLLDQYVSPAISTGSAIRNTHYHIIGNGQLVNEWTAGLEQAGVPPSRVTT 358
BLAST of mRNA_H-akashiwo_Contig108.13.1 vs. uniprot
Match: A0A1E7EY24_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EY24_9STRA) HSP 1 Score: 199 bits (506), Expect = 1.090e-57 Identity = 130/323 (40.25%), Postives = 174/323 (53.87%), Query Frame = 1 Query: 7 LFAAGGAPQYEKLDAVLQEAKFLGEGTVILHIDTLGKSIE-----------YKPGHVLALEIEGDSTTVVET-------------KTTQDMADNGGWMRGPYTVSRATETS-----------FDVLIKVVGEKSKRFASAQPGTALRFGGKFKVPIIEGVK-GNDVD------------RVVFISTGVGAGPCVGAIETALTKKSPFPP--------IQLVASYRHNAEVLYKDHLDALSME---YPESFVWTPIVTSEVGRVSANEEN------LKSITLSPFGEACCLGATHYHLIGNGQLVNEFKAGLAKAGVPDERVTT 780 LFA GGAPQY+K VLQ ++ +G+G+ +LHID K Y+PGHVLALEI+ T ++ KT +D+ +N GW+RGPYTVSR +S F VLI+ VG KS A++ P T ++FGG+FKVPI+EG++ + VD RVV ISTGVG GPC+GAIE L+ + I L+AS+R E+ D L+ L + + F W ++T EVGR+S N + L+ C + THYH+IGNGQLVNE+ GLAKAGV +RVTT Sbjct: 41 LFAEGGAPQYQKQRGVLQRSEAVGKGSYLLHIDYDKKFNNEEEENDFEDGYYQPGHVLALEIQPPPATTDDSLSSSTSFNATMNDKTKRDLNNNDGWLRGPYTVSRGYGSSDSNDDNNNSPGFQVLIREVGYKSNVLATSIPSTPVQFGGRFKVPIVEGIRMASQVDNEDDKENVDTTRRVVMISTGVGIGPCIGAIELLLSPSADDEDNNNDNDIAIDLIASFRTQDEIAMTDDLNRLQSDARSLGKQFNWKAVITEEVGRLSLNSPDVLLDRYLQRDDNDDDDNLCMIRNTHYHIIGNGQLVNEWTKGLAKAGVAKKRVTT 363
BLAST of mRNA_H-akashiwo_Contig108.13.1 vs. uniprot
Match: A0A1E7FCS8_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FCS8_9STRA) HSP 1 Score: 202 bits (513), Expect = 1.120e-55 Identity = 132/321 (41.12%), Postives = 176/321 (54.83%), Query Frame = 1 Query: 7 LFAAGGAPQYEKLDAVLQEAKFLGEGTVILHID---TLGKSIE--------YKPGHVLALEIEGDSTTVVET-------------KTTQDMADNGGWMRGPYTVSRATETS-----------FDVLIKVVGEKSKRFASAQPGTALRFGGKFKVPIIEGVK-GNDVD------------RVVFISTGVGAGPCVGAIETALTKKSPFPP----IQLVASYRHNAEVLYKDHLDALSME---YPESFVWTPIVTSEVGRVSANEEN-LKSITLS-------PFGEACCLGATHYHLIGNGQLVNEFKAGLAKAGVPDERVTT 780 LFA GGAPQY+K VLQ ++ +G+G+ +LHID E Y+PGHVLALEI+ T ++ KT +D+ +N GW+RGPYTVSR +S F VLI+ VG KS A++ PGT ++FGG+FKVPI+EG++ + VD RVV ISTGVG GPC+GAIE L+ + I L+AS+R E+ D L+ L + + F W ++T EVGR+S N + L+ L C + THYH+IGNGQLVNE+ GLAKAGV +RVTT Sbjct: 41 LFAEGGAPQYQKQRGVLQRSEAVGKGSYLLHIDYDKNYNNEEEENDFEDGYYQPGHVLALEIQPPPATTDDSLSSSTSFNATMNEKTKRDLNNNDGWLRGPYTVSRGYGSSDSNDDNNNSPGFQVLIREVGYKSNVLATSIPGTPVQFGGRFKVPIVEGIRMASQVDNEDDKENVDTTRRVVMISTGVGIGPCIGAIELLLSSSADDEDNDIAIDLIASFRTQDEIAMTDDLNRLQSDARSLGKQFNWKAVITEEVGRLSLNSPDVLRDRYLQRDDNDNXXXDNLCMIRNTHYHIIGNGQLVNEWSKGLAKAGVAKKRVTT 361 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig108.13.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig108.13.1 >prot_H-akashiwo_Contig108.13.1 ID=prot_H-akashiwo_Contig108.13.1|Name=mRNA_H-akashiwo_Contig108.13.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=202bp MADNGGWMRGPYTVSRATETSFDVLIKVVGEKSKRFASAQPGTALRFGGKback to top mRNA from alignment at H-akashiwo_Contig108:1174775..1175622+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig108.13.1 ID=mRNA_H-akashiwo_Contig108.13.1|Name=mRNA_H-akashiwo_Contig108.13.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=848bp|location=Sequence derived from alignment at H-akashiwo_Contig108:1174775..1175622+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig108:1174775..1175622+ >mRNA_H-akashiwo_Contig108.13.1 ID=mRNA_H-akashiwo_Contig108.13.1|Name=mRNA_H-akashiwo_Contig108.13.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=606bp|location=Sequence derived from alignment at H-akashiwo_Contig108:1174775..1175622+ (Heterosigma akashiwo CCMP452)back to top |