mRNA_H-akashiwo_Contig1056.5.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1056.5.1 vs. uniprot
Match: A0A6V1P5X7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P5X7_HETAK) HSP 1 Score: 350 bits (897), Expect = 8.030e-115 Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 1 Query: 1 PSTWNVVMISPLFKSDDPNDTNNYRGISLLSCLGKLFCSIINEFVYTQVESAHLLSDLQGGFRRKRGCREQSFLLLSALLTANRRRGRRAHCAFVDFRKAYDSVKHSVLWKRLDSLGLGPKLTELLRSIYDKVRCTVRKDNQLSDLFPYDIGVRQGCILSPIIFNLFIDELV 516 PSTWNVVMISPLFKSDDPNDTNNYRGISLLSCLGKLFCSIINEFVYTQVESAHLLSDLQGGFRRKRGCREQSFLLLSALLTANRRRGRRAHCAFVDFRKAYDSVKHSVLWKRLDSLGLGPKLTELLRSIYDKVRCTVRKDNQLSDLFPYDIGVRQGCILSPIIFNLFIDELV Sbjct: 91 PSTWNVVMISPLFKSDDPNDTNNYRGISLLSCLGKLFCSIINEFVYTQVESAHLLSDLQGGFRRKRGCREQSFLLLSALLTANRRRGRRAHCAFVDFRKAYDSVKHSVLWKRLDSLGLGPKLTELLRSIYDKVRCTVRKDNQLSDLFPYDIGVRQGCILSPIIFNLFIDELV 262
BLAST of mRNA_H-akashiwo_Contig1056.5.1 vs. uniprot
Match: A0A6H5KGV1_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGV1_9PHAE) HSP 1 Score: 139 bits (350), Expect = 2.220e-36 Identity = 66/172 (38.37%), Postives = 106/172 (61.63%), Query Frame = 1 Query: 1 PSTWNVVMISPLFKSDDPNDTNNYRGISLLSCLGKLFCSIINEFVYTQVESAHLLSDLQGGFRRKRGCREQSFLLLSALLTANRRRGRRAHCAFVDFRKAYDSVKHSVLWKRLDSLGLGPKLTELLRSIYDKVRCTVRKDNQLSDLFPYDIGVRQGCILSPIIFNLFIDELV 516 PS W ++ LFK D D NYRGI+LL+ +GK+FC ++N+ + +E H +S+ Q GFR+KRGC + F + ++ +R G+ +C F+D +KAYD+V + LWK+L G+ K+ +L+ + + + V D +LS F + GV QGC LSP +F +FI++L+ Sbjct: 142 PSRWREGVVVNLFKKGDKTDPGNYRGITLLNTVGKVFCKLLNDRIVGVLEKEHSISEGQAGFRKKRGCVDHVFTV-GRIIQGRKRAGKPTYCFFLDVKKAYDTVWRNGLWKQLSKYGIKGKMWRVLKKMTECTKSAVMLDGELSKFFDIEQGVPQGCTLSPTLFQVFINDLL 312
BLAST of mRNA_H-akashiwo_Contig1056.5.1 vs. uniprot
Match: UPI001E1E1F32 (uncharacterized protein LOC123553993 isoform X1 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E1F32) HSP 1 Score: 141 bits (356), Expect = 8.300e-36 Identity = 66/172 (38.37%), Postives = 110/172 (63.95%), Query Frame = 1 Query: 1 PSTWNVVMISPLFKSDDPNDTNNYRGISLLSCLGKLFCSIINEFVYTQVESAHLLSDLQGGFRRKRGCRE-QSFLLLSALLTANRRRGRRAHCAFVDFRKAYDSVKHSVLWKRLDSLGLGPKLTELLRSIYDKVRCTVRKDNQLSDLFPYDIGVRQGCILSPIIFNLFIDEL 513 P +W +I PLFK +DP+D NNYRGI+L+SC K+F ++N+ + +ES +++SD Q GFR+ GC + +L+A+++ R CAF+DF KA+DS+ + LW +L LG+ ++R +Y KV+ +R SD F +G++QG ++SP++F+LF+++L Sbjct: 366 PDSWMEGIIVPLFKKNDPSDVNNYRGITLVSCFSKIFTGVLNKRISNWIESNNIISDAQFGFRK--GCSTVDAIFVLNAIISKVLSENGRLACAFIDFSKAFDSIYRNGLWYKLHQLGITGNTLRIIRDMYSKVKACIRGCKSYSDFFECSMGLKQGEVISPLLFSLFLEDL 535
BLAST of mRNA_H-akashiwo_Contig1056.5.1 vs. uniprot
Match: UPI0007381EC2 (uncharacterized protein LOC107046505 n=1 Tax=Diachasma alloeum TaxID=454923 RepID=UPI0007381EC2) HSP 1 Score: 141 bits (356), Expect = 8.370e-36 Identity = 64/171 (37.43%), Postives = 108/171 (63.16%), Query Frame = 1 Query: 1 PSTWNVVMISPLFKSDDPNDTNNYRGISLLSCLGKLFCSIINEFVYTQVESAHLLSDLQGGFRRKRGCREQSFLLLSALLTANRRRGRRAHCAFVDFRKAYDSVKHSVLWKRLDSLGLGPKLTELLRSIYDKVRCTVRKDNQLSDLFPYDIGVRQGCILSPIIFNLFIDEL 513 P +W+ V ++ ++K D D NYRGI+L++C+ KLF +++ + E ++ + Q GFRRK+GC++ + L SA+ R R + FVD++KA+DSV H +LW++L LG+ K+ +++S+YD+ V+ D+QL+D GV QG ILSP++F LF+ ++ Sbjct: 757 PESWSQVTLTMIYKKGDERDPANYRGIALVNCIAKLFTTVLKNRLELWEEKLKIIPEYQAGFRRKKGCQDNIYTLFSAIHLQLRLTKRSVYGLFVDYQKAFDSVSHDILWRKLHELGVSAKMLRIIKSLYDRASMKVKMDSQLTDPIAITQGVLQGEILSPLLFILFVHDI 927
BLAST of mRNA_H-akashiwo_Contig1056.5.1 vs. uniprot
Match: A0A6H5JMB0_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMB0_9PHAE) HSP 1 Score: 136 bits (343), Expect = 9.960e-36 Identity = 65/169 (38.46%), Postives = 103/169 (60.95%), Query Frame = 1 Query: 1 PSTWNVVMISPLFKSDDPNDTNNYRGISLLSCLGKLFCSIINEFVYTQVESAHLLSDLQGGFRRKRGCREQSFLLLSALLTANRRRGRRAHCAFVDFRKAYDSVKHSVLWKRLDSLGLGPKLTELLRSIYDKVRCTVRKDNQLSDLFPYDIGVRQGCILSPIIFNLFID 507 PS W ++ LFK D D NYRGI+LL+ +GK+FC ++N+ + +E H +S+ Q GFR+KRGC + F + ++ +R G+ +C F+D +KAYD+V + LWK+L G+ K+ +L+ + + + V D +LS F + GV QGC LSP +F +FI+ Sbjct: 190 PSRWREGVVVNLFKKGDKTDPGNYRGITLLNTVGKVFCKLLNDRIVGVLEKEHSISEGQAGFRKKRGCVDHVFTV-GRIIQGRKRAGKPTYCFFLDVKKAYDTVWRNGLWKQLSKYGIKGKMWRVLKKMTECTKSAVMLDGELSKFFDIEQGVPQGCTLSPTLFQVFIN 357
BLAST of mRNA_H-akashiwo_Contig1056.5.1 vs. uniprot
Match: A0A6H5KYR3_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYR3_9PHAE) HSP 1 Score: 137 bits (345), Expect = 1.140e-35 Identity = 65/172 (37.79%), Postives = 106/172 (61.63%), Query Frame = 1 Query: 1 PSTWNVVMISPLFKSDDPNDTNNYRGISLLSCLGKLFCSIINEFVYTQVESAHLLSDLQGGFRRKRGCREQSFLLLSALLTANRRRGRRAHCAFVDFRKAYDSVKHSVLWKRLDSLGLGPKLTELLRSIYDKVRCTVRKDNQLSDLFPYDIGVRQGCILSPIIFNLFIDELV 516 PS W ++ LFK D D NYRGI+LL+ +GK+FC ++N+ + +E H +S+ Q GFR+KRGC + F + ++ +R G+ +C F+D +KAYD+V + LWK+L G+ + +L+ + + ++ V D +LS F + GV QGC LSP +F +FI++L+ Sbjct: 201 PSRWREGVVVNLFKKGDKTDPGNYRGITLLNTVGKVFCKLLNDRIVGVLEKEHSISEGQAGFRKKRGCVDHVFTV-GRIIQGRKRAGKPTYCFFLDVKKAYDTVWRNGLWKQLSKYGIKGTMWRVLKKMTECMKSAVMLDGELSKFFDIEQGVPQGCTLSPTLFQVFINDLL 371
BLAST of mRNA_H-akashiwo_Contig1056.5.1 vs. uniprot
Match: A0A6H5GUJ7_9HEMI (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GUJ7_9HEMI) HSP 1 Score: 135 bits (341), Expect = 1.370e-35 Identity = 68/170 (40.00%), Postives = 103/170 (60.59%), Query Frame = 1 Query: 1 PSTWNVVMISPLFKSDDPNDTNNYRGISLLSCLGKLFCSIINEFVYTQVESAHLLSDLQGGFRRKRGCREQSFLLLSALLTANRRRGRRAHCAFVDFRKAYDSVKHSVLWKRLDSLGLGPKLTELLRSIYDKVRCTVRKDNQLSDLFPYDIGVRQGCILSPIIFNLFIDE 510 P+ W + LFK DP++ NYRGISLL+CL K+F I+ E + VES L+ + Q GFR+ RGC + F+L S + R + R+ CAFVDF +A+D+V H VLW +L+ LG+ P+ ++R++Y+ +VR + F G+ QG ILSP++F L + + Sbjct: 23 PAEWGSIKTFLLFKKGDPSNVANYRGISLLNCLAKIFTRILYERLVVFVESKSLIPETQNGFRKGRGCADNVFVLSSLVNINTRLKRRKVFCAFVDFFRAFDAVSHPVLWGKLEWLGVSPRFISVIRALYEGASFSVRVGAASTRPFRLSQGILQGDILSPLLFALLLAD 192
BLAST of mRNA_H-akashiwo_Contig1056.5.1 vs. uniprot
Match: A0A6H5JUL8_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUL8_9PHAE) HSP 1 Score: 139 bits (351), Expect = 2.870e-35 Identity = 66/172 (38.37%), Postives = 106/172 (61.63%), Query Frame = 1 Query: 1 PSTWNVVMISPLFKSDDPNDTNNYRGISLLSCLGKLFCSIINEFVYTQVESAHLLSDLQGGFRRKRGCREQSFLLLSALLTANRRRGRRAHCAFVDFRKAYDSVKHSVLWKRLDSLGLGPKLTELLRSIYDKVRCTVRKDNQLSDLFPYDIGVRQGCILSPIIFNLFIDELV 516 PS W ++ LFK D D NYRGI+LL+ +GK+FC ++N+ + +E H +S+ Q GFR+KRGC + F + ++ +R G+ +C F+D +KAYD+V + LWK+L G+ K+ +L+ + + + V D +LS F + GV QGC LSP +F +FI++L+ Sbjct: 111 PSRWREEVVVNLFKKGDKTDPGNYRGITLLNTVGKVFCKLLNDRIVGVLEKEHSISEGQAGFRKKRGCVDHVFTV-GRIIQGRKRAGKPTYCFFLDVKKAYDTVWRNGLWKQLSKYGIKGKMWRVLKKMTECTKSAVMLDGELSKFFDIEQGVPQGCTLSPTLFQVFINDLL 281
BLAST of mRNA_H-akashiwo_Contig1056.5.1 vs. uniprot
Match: A0A6H5KXP1_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXP1_9PHAE) HSP 1 Score: 137 bits (344), Expect = 3.910e-35 Identity = 66/172 (38.37%), Postives = 105/172 (61.05%), Query Frame = 1 Query: 1 PSTWNVVMISPLFKSDDPNDTNNYRGISLLSCLGKLFCSIINEFVYTQVESAHLLSDLQGGFRRKRGCREQSFLLLSALLTANRRRGRRAHCAFVDFRKAYDSVKHSVLWKRLDSLGLGPKLTELLRSIYDKVRCTVRKDNQLSDLFPYDIGVRQGCILSPIIFNLFIDELV 516 PS W + LFK D D NYRGI+LL+ +GK+FC ++N+ + +E H +S+ Q GFR+KRGC + F + ++ +R G+ +C F+D RKAY++V + LWK+L G+ K+ +L+ + + + V D +LS F + GV QGC LSP +F +FI++L+ Sbjct: 26 PSRWREGVAVNLFKKGDKTDPGNYRGITLLNTVGKVFCKLLNDRIVGVLEKEHSISEGQAGFRKKRGCVDHVFTV-GRIIQGRKRAGKPTYCFFLDVRKAYNTVWRNGLWKQLSKYGIKGKMWRVLKKMTECTKSAVMLDGELSKFFDIEQGVPQGCTLSPTLFQVFINDLL 196
BLAST of mRNA_H-akashiwo_Contig1056.5.1 vs. uniprot
Match: A0A6H5JCP6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCP6_9PHAE) HSP 1 Score: 139 bits (350), Expect = 4.160e-35 Identity = 66/172 (38.37%), Postives = 106/172 (61.63%), Query Frame = 1 Query: 1 PSTWNVVMISPLFKSDDPNDTNNYRGISLLSCLGKLFCSIINEFVYTQVESAHLLSDLQGGFRRKRGCREQSFLLLSALLTANRRRGRRAHCAFVDFRKAYDSVKHSVLWKRLDSLGLGPKLTELLRSIYDKVRCTVRKDNQLSDLFPYDIGVRQGCILSPIIFNLFIDELV 516 PS W ++ LFK D D NYRGI+LL+ +GK+FC ++N+ + +E H +S+ Q GFR+KRGC + F + ++ +R G+ +C F+D +KAYD+V + LWK+L G+ K+ +L+ + + + V D +LS F + GV QGC LSP +F +FI++L+ Sbjct: 214 PSRWREGVVVNLFKKGDKTDPGNYRGITLLNTVGKVFCKLLNDRIVGVLEKEHSISEGQAGFRKKRGCVDHVFTV-GRIIQGRKRAGKPTYCFFLDVKKAYDTVWRNGLWKQLSKYGIKGKMWRVLKKMTECTKSAVMLDGELSKFFDIEQGVPQGCTLSPTLFQVFINDLL 384 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1056.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1056.5.1 >prot_H-akashiwo_Contig1056.5.1 ID=prot_H-akashiwo_Contig1056.5.1|Name=mRNA_H-akashiwo_Contig1056.5.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=165bp MISPLFKSDDPNDTNNYRGISLLSCLGKLFCSIINEFVYTQVESAHLLSDback to top mRNA from alignment at H-akashiwo_Contig1056:203291..203806+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1056.5.1 ID=mRNA_H-akashiwo_Contig1056.5.1|Name=mRNA_H-akashiwo_Contig1056.5.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=516bp|location=Sequence derived from alignment at H-akashiwo_Contig1056:203291..203806+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1056:203291..203806+ >mRNA_H-akashiwo_Contig1056.5.1 ID=mRNA_H-akashiwo_Contig1056.5.1|Name=mRNA_H-akashiwo_Contig1056.5.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=495bp|location=Sequence derived from alignment at H-akashiwo_Contig1056:203291..203806+ (Heterosigma akashiwo CCMP452)back to top |