mRNA_H-akashiwo_Contig1036.6.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1036.6.1 vs. uniprot
Match: A0A6V1PSZ3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PSZ3_HETAK) HSP 1 Score: 255 bits (652), Expect = 2.850e-79 Identity = 145/199 (72.86%), Postives = 151/199 (75.88%), Query Frame = 2 Query: 23 MPFVKVLKNKAYFKRYQVKFRRRREGKTDYRARRRLISQDKNKYNSPKYRLVVRFTNTKVICQIVYSLIDGDRVLASAYSTELPRYGLPCGLKNSRSLCHWPASGPAHTAEGGPGRGVSRATARWTGRW*APELSRRR-MPNEVDEDKRPFRALLDVGITPTTTGHRVFGALKGAC--GAWTCSMVKRFPATTSEGKSY 610 MPFVKVLKNKAYFKRYQVKFRRRREGKTDYRARRRLISQDKNKYNSPKYRLVVRFTNTKVICQIVYSLIDGDRVLASAYSTELPRYGLPCGLKN + T + V G+ + EL+ R+ NEVDEDKRPFRALLDVGITPTTTGHRVFGALKGAC G KRFP EGKSY Sbjct: 1 MPFVKVLKNKAYFKRYQVKFRRRREGKTDYRARRRLISQDKNKYNSPKYRLVVRFTNTKVICQIVYSLIDGDRVLASAYSTELPRYGLPCGLKNYAAAYATGLLLARRTLQKVGLDDVYEGNDEVDGQVVSTELNGRKYFVNEVDEDKRPFRALLDVGITPTTTGHRVFGALKGACDGGLDVPHSEKRFPGYDREGKSY 199
BLAST of mRNA_H-akashiwo_Contig1036.6.1 vs. uniprot
Match: B7FPQ0_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FPQ0_PHATC) HSP 1 Score: 197 bits (502), Expect = 5.160e-57 Identity = 119/205 (58.05%), Postives = 134/205 (65.37%), Query Frame = 2 Query: 23 MPFVKVLKNKAYFKRYQVKFRRRREGKTDYRARRRLISQDKNKYNSPKYRLVVRFTNTKVICQIVYSLIDGDRVLASAYSTELPRYGLPCGLKN-SRSLCHWPASGPAHTAEGG-----PGRGVSRATARWTGRW*APELSRRR-MPNEVDEDKRPFRALLDVGITPTTTGHRVFGALKGAC--GAWTCSMVKRFPATTSEGKSY 610 MPFVK KNKAYF RYQVKFRRRREG+TDYR R+RL+ QDKNKY SPKYRLVVRFTNT+VICQIVYSL+DGDR+L A S EL RYGL GLKN + + C + + G G AT T E +++ +EVDEDKRPFR LLDVG PTTTGHRVFGALKGA G KRFP + K Y Sbjct: 1 MPFVKNTKNKAYFSRYQVKFRRRREGRTDYRQRKRLVCQDKNKYQSPKYRLVVRFTNTQVICQIVYSLVDGDRILCQANSKELARYGLSVGLKNYAAAYCTGLLAARRLLQKVGLDDVYEGNSEVDATIVST------EYDKKKYFVDEVDEDKRPFRCLLDVGCKPTTTGHRVFGALKGAADGGLDIPHSEKRFPGFDRDSKEY 199
BLAST of mRNA_H-akashiwo_Contig1036.6.1 vs. uniprot
Match: A0A2D4C1S7_PYTIN (Ribosomal_L18_c domain-containing protein n=4 Tax=Eukaryota TaxID=2759 RepID=A0A2D4C1S7_PYTIN) HSP 1 Score: 197 bits (500), Expect = 9.140e-57 Identity = 123/237 (51.90%), Postives = 149/237 (62.87%), Query Frame = 2 Query: 23 MPFVKVLKNKAYFKRYQVKFRRRREGKTDYRARRRLISQDKNKYNSPKYRLVVRFTNTKVICQIVYSLIDGDRVLASAYSTELPRYGLPCGLKNSRSLCHWPASGPAHTAEGGPGRGVSR---------ATARWTGRW*APELSRRRM-PNEVDEDKRPFRALLDVGITPTTTGHRVFGALKGACGAWTC--SMVKRFPATTSEGKSYGGRAQAHHGQPREGVHGVPAGGGSRAVQD 697 MPFVKV KNKAYFKR+QVK+RRRREGKTDYRAR+RLI+QDKNKYNSPKYRLVVR TN +VICQI Y+ IDGD++LA+AYS+ELPRYG GLKN + A+ GR V + TG + E + R EV ++KRPFR LDVG+ TTTGHRVFGALKGA A KRFP + KSY A+ H R+ + GV G + +++ Sbjct: 1 MPFVKVTKNKAYFKRFQVKYRRRREGKTDYRARKRLITQDKNKYNSPKYRLVVRITNKQVICQIAYAEIDGDKILAAAYSSELPRYGFTLGLKNYAA---------AYATGLLVGRRVLQKLGLDEDYEGNTEVTGEFVKTEANGRTYYVEEVADEKRPFRCYLDVGLRTTTTGHRVFGALKGAADAGLDIPHTEKRFPGYNRDDKSYD--AEVH----RDRIMGVHIGDHMKELEE 222
BLAST of mRNA_H-akashiwo_Contig1036.6.1 vs. uniprot
Match: M4BV67_HYAAE (Ribosomal_L18_c domain-containing protein n=32 Tax=Peronosporaceae TaxID=4777 RepID=M4BV67_HYAAE) HSP 1 Score: 192 bits (487), Expect = 7.820e-55 Identity = 119/209 (56.94%), Postives = 129/209 (61.72%), Query Frame = 2 Query: 23 MPFVKVLKNKAYFKRYQVKFRRRREGKTDYRARRRLISQDKNKYNSPKYRLVVRFTNTKVICQIVYSLIDGDRVLASAYSTELPRYGLPCGLKN-----------SRSLCHWPASGPAHTAEGGPGRGVSRATARWTGRW*APELSRRRMPNEVDEDKRPFRALLDVGITPTTTGHRVFGALKGACGAWTC--SMVKRFPATTSEGKSY 610 MPFVKVLKNKAYFKRYQVK+RRRREGKTDYRAR+RLISQDKNKYNSPKYRLVVR TN VICQI Y+ IDGD++LA A S ELPRYGL GLKN R L G EG GR E EV ++KRPFR LD G+ TTTGHRVFGALKGA A KRFP + + KSY Sbjct: 1 MPFVKVLKNKAYFKRYQVKYRRRREGKTDYRARKRLISQDKNKYNSPKYRLVVRITNKHVICQIAYAEIDGDKILAQATSAELPRYGLTVGLKNYAAAYATGLLVGRRLLQ--KLGLDEDYEGNTEVDGEIVKTESNGRTYFVE--------EVADEKRPFRCYLDCGLRTTTTGHRVFGALKGAADAGLDIPHSEKRFPGYSRDDKSY 199
BLAST of mRNA_H-akashiwo_Contig1036.6.1 vs. uniprot
Match: A0A836CBG0_9STRA (RL5, ribosomal protein 5 60S large ribosomal subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBG0_9STRA) HSP 1 Score: 192 bits (487), Expect = 1.260e-54 Identity = 117/213 (54.93%), Postives = 137/213 (64.32%), Query Frame = 2 Query: 23 MPFVKVLKNKAYFKRYQVKFRRRREGKTDYRARRRLISQDKNKYNSPKYRLVVRFTNTKVICQIVYSLIDGDRVLASAYSTELPRYGLPCGLKNSRS------LCHWPASGPAHTAEGGPGRGVSRATARWTGRW*APELSRRR-MPNEVDEDKRPFRALLDVGITPTTTGHRVFGALKGAC--GAWTCSMVKRFPATTSEGKSYGGRAQAHH 634 MPFVKVLKNKAYFKRYQVK+RRRREGKTDYRAR+RLI QDKNKYN+PKYRLVVRF+N V CQI Y+ ++GD++L A S EL RYGL GLKN + LC AE G+ + T T E+ ++ EVDEDKRPFRALLDVGI T+TG RVFGA+KGA G KRFP + K + A+ HH Sbjct: 1 MPFVKVLKNKAYFKRYQVKYRRRREGKTDYRARKRLICQDKNKYNAPKYRLVVRFSNRYVNCQIAYATVEGDKILCQANSRELERYGLKTGLKNYAAAYCTGLLCARRLLKQLGLAELYEGQEEAEGTVVKT------EMGKKTYFVEEVDEDKRPFRALLDVGIVATSTGARVFGAMKGAADGGLDIPHSEKRFPGYDRDSKEFD--AEVHH 205
BLAST of mRNA_H-akashiwo_Contig1036.6.1 vs. uniprot
Match: A0A448Z3Q5_9STRA (Ribosomal_L18_c domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z3Q5_9STRA) HSP 1 Score: 191 bits (486), Expect = 1.270e-54 Identity = 112/200 (56.00%), Postives = 130/200 (65.00%), Query Frame = 2 Query: 23 MPFVKVLKNKAYFKRYQVKFRRRREGKTDYRARRRLISQDKNKYNSPKYRLVVRFTNTKVICQIVYSLIDGDRVLASAYSTELPRYGLPCGLKN-SRSLCHWPASGPAHTAEGGPGRGVSRATARWTGRW*APELSRRR-MPNEVDEDKRPFRALLDVGITPTTTGHRVFGALKGAC--GAWTCSMVKRFPATTSEGKSY 610 M F++ + KAYF RYQVKFRRRREGKTDYRAR+RL +QDKNKY SPKYRLVVRFTNTKVICQI Y+L+DGDR+L A STEL RYGL GLKN + + C + G + G + E ++ EVD+DKRPFRALLDVG PTTTGHR+FGALKGA G KRFP + K Y Sbjct: 1 MTFIQEGRTKAYFSRYQVKFRRRREGKTDYRARKRLCAQDKNKYQSPKYRLVVRFTNTKVICQIAYALVDGDRILCQAQSTELGRYGLTVGLKNYAAAYCTGLLCARRLLQKVGLDE-IYEGNTEVDGEVVSTEYDKKTYFVEEVDDDKRPFRALLDVGCKPTTTGHRLFGALKGAADGGLDVPHSEKRFPGYDRDAKEY 199
BLAST of mRNA_H-akashiwo_Contig1036.6.1 vs. uniprot
Match: A0A6U1RJ63_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A6U1RJ63_CYCTE) HSP 1 Score: 191 bits (484), Expect = 2.970e-54 Identity = 110/200 (55.00%), Postives = 127/200 (63.50%), Query Frame = 2 Query: 20 TMPFVKVLKNKAYFKRYQVKFRRRREGKTDYRARRRLISQDKNKYNSPKYRLVVRFTNTKVICQIVYSLIDGDRVLASAYSTELPRYGLPCGLKNSRSLCHWPASGPAHTAEGGPGRGVSRATARWTGRW*APELSRRR-MPNEVDEDKRPFRALLDVGITPTTTGHRVFGALKGAC--GAWTCSMVKRFPATTSEGKSY 610 TMPFVKV KN+AYF RYQVK+RRRREGKTDYR R+RL +QDKNKY SPKYRLVVRFTN +VICQI Y+L+DGDR+LA A S ELPRYGL GLKN + + V G + E ++ EVD+DKRPFR LDVG TTTG+R+FGALKGA G KRFP + K Y Sbjct: 6 TMPFVKVQKNRAYFSRYQVKYRRRREGKTDYRQRKRLCAQDKNKYQSPKYRLVVRFTNKQVICQIAYALVDGDRILAQATSKELPRYGLKVGLKNYAAAYCTGLLVARRVLQKLGLDDVYEGNTEVDGEVVSTEYDKKMYFVEEVDDDKRPFRCFLDVGCKATTTGNRIFGALKGAADGGIDVPHSEKRFPGYDRDAKEY 205
BLAST of mRNA_H-akashiwo_Contig1036.6.1 vs. uniprot
Match: A0A024GN61_9STRA (Ribosomal_L18_c domain-containing protein n=2 Tax=Albugo TaxID=65356 RepID=A0A024GN61_9STRA) HSP 1 Score: 189 bits (481), Expect = 6.080e-54 Identity = 117/209 (55.98%), Postives = 127/209 (60.77%), Query Frame = 2 Query: 23 MPFVKVLKNKAYFKRYQVKFRRRREGKTDYRARRRLISQDKNKYNSPKYRLVVRFTNTKVICQIVYSLIDGDRVLASAYSTELPRYGLPCGLKN-----------SRSLCHWPASGPAHTAEGGPGRGVSRATARWTGRW*APELSRRRMPNEVDEDKRPFRALLDVGITPTTTGHRVFGALKGA--CGAWTCSMVKRFPATTSEGKSY 610 M FVKV KNKAYFKRYQVK+RRRREGKTDYRAR+RLI+QDKNKYNSPKYRLVVR TNTKVICQI Y+ IDGD++LA A STELPRYGL G KN R + G EG GR NEV +D RPFR LDVG+ TTTG+RVFGALKGA G VKRFP E Y Sbjct: 1 MTFVKVTKNKAYFKRYQVKYRRRREGKTDYRARKRLITQDKNKYNSPKYRLVVRITNTKVICQIAYAEIDGDKILAEATSTELPRYGLKVGFKNYSAAYATGLLLGRRVLQ--TLGLDEKYEGNTEVDAEVVKTEVNGRT--------YYVNEVADDGRPFRCYLDVGLRTTTTGNRVFGALKGAIDAGLDIPHSVKRFPGYDRESDKY 199
BLAST of mRNA_H-akashiwo_Contig1036.6.1 vs. uniprot
Match: A0A7S2S730_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S730_9STRA) HSP 1 Score: 190 bits (482), Expect = 1.440e-53 Identity = 117/221 (52.94%), Postives = 138/221 (62.44%), Query Frame = 2 Query: 8 PYLSTMPFVKVLKNKAYFKRYQVKFRRRREGKTDYRARRRLISQDKNKYNSPKYRLVVRFTNTKVICQIVYSLIDGDRVLASAYSTELPRYGLPCGLKN-----------SRSLCHWPASGPAHTAE------GGPGRGVSRATARWTGRW*APELSRRR-MPNEVDEDKRPFRALLDVGITPTTTGHRVFGALKGAC--GAWTCSMVKRFPATTSEGKSY 610 P+++TMPFVKV+KNKAYFKRYQVKFRRRREGKTDYRAR+RLI+QDKNKYNSPKYRLVVRFTN ICQIVYS I GD+V+A A S EL RYGL GLKN +R L + + +T + + ++R ++DEDK+PF ALLDVGI T+TG RVFGALKGA G KRFP + KSY Sbjct: 21 PWVATMPFVKVVKNKAYFKRYQVKFRRRREGKTDYRARKRLITQDKNKYNSPKYRLVVRFTNRHCICQIVYSEIVGDKVMAHANSAELERYGLKVGLKNYSAAYCTGLLVARRLLQKIGLDSVYKGQLTYENDEXXXXXXXXXXXEYTPEVVSTKFNKRTYFVEQLDEDKKPFHALLDVGIITTSTGSRVFGALKGATDGGLDVPHSEKRFPGYDRDDKSY 241
BLAST of mRNA_H-akashiwo_Contig1036.6.1 vs. uniprot
Match: A0A7R9ZDP8_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZDP8_9STRA) HSP 1 Score: 189 bits (479), Expect = 2.540e-53 Identity = 116/207 (56.04%), Postives = 132/207 (63.77%), Query Frame = 2 Query: 23 MPFVKVLKNKAYFKRYQVKFRRRREGKTDYRARRRLISQDKNKYNSPKYRLVVRFTNTKVICQIVYSLIDGDRVLASAYSTELPRYGLPCGLKN-SRSLCHW--------PASGPAHTAEGGPGRGVSRATARWTGRW*APELSRRRMPNEVDEDKRPFRALLDVGITPTTTGHRVFGALKGAC--GAWTCSMVKRFPATTSEGKSY 610 MPFVK +KNKAYFKRYQVKFRRRREGKTDYRAR+RL+ DKNKY S +YRLVVRFTNT+VI QIVY+ +DGDRVLASAYS+EL RYGL GLKN + + C G T EG + G+ + +EVDEDKRPFR LLDVG TTTG R+FGALKGA G KRFP + K Y Sbjct: 22 MPFVKTVKNKAYFKRYQVKFRRRREGKTDYRARQRLVRMDKNKYQSHRYRLVVRFTNTQVIAQIVYTELDGDRVLASAYSSELKRYGLSFGLKNYAAAYCTGLLVARRVLEKLGLDDTYEGNTDVDGEVVSTEVDGK--------QYFVDEVDEDKRPFRCLLDVGCRATTTGCRIFGALKGAADGGLDIPHSEKRFPGYDRDAKEY 220 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1036.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1036.6.1 >prot_H-akashiwo_Contig1036.6.1 ID=prot_H-akashiwo_Contig1036.6.1|Name=mRNA_H-akashiwo_Contig1036.6.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=168bp MPNEVDEDKRPFRALLDVGITPTTTGHRVFGALKGACGAWTCSMVKRFPAback to top mRNA from alignment at H-akashiwo_Contig1036:376773..378367- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1036.6.1 ID=mRNA_H-akashiwo_Contig1036.6.1|Name=mRNA_H-akashiwo_Contig1036.6.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1595bp|location=Sequence derived from alignment at H-akashiwo_Contig1036:376773..378367- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1036:376773..378367- >mRNA_H-akashiwo_Contig1036.6.1 ID=mRNA_H-akashiwo_Contig1036.6.1|Name=mRNA_H-akashiwo_Contig1036.6.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=504bp|location=Sequence derived from alignment at H-akashiwo_Contig1036:376773..378367- (Heterosigma akashiwo CCMP452)back to top |