prot_H-akashiwo_Contig1036.6.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig1036.6.1
Unique Nameprot_H-akashiwo_Contig1036.6.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length168
Homology
BLAST of mRNA_H-akashiwo_Contig1036.6.1 vs. uniprot
Match: A0A6V1PSZ3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PSZ3_HETAK)

HSP 1 Score: 88.2 bits (217), Expect = 9.190e-18
Identity = 45/58 (77.59%), Postives = 45/58 (77.59%), Query Frame = 0
Query:    3 NEVDEDKRPFRALLDVGITPTTTGHRVFGALKGAC--GAWTCSMVKRFPATTSEGKSY 58
            NEVDEDKRPFRALLDVGITPTTTGHRVFGALKGAC  G       KRFP    EGKSY
Sbjct:  142 NEVDEDKRPFRALLDVGITPTTTGHRVFGALKGACDGGLDVPHSEKRFPGYDREGKSY 199          
BLAST of mRNA_H-akashiwo_Contig1036.6.1 vs. uniprot
Match: A0A1E7FFB1_9STRA (RL5, ribosomal protein 5 60S large ribosomal subunit n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FFB1_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 6.930e-12
Identity = 37/58 (63.79%), Postives = 39/58 (67.24%), Query Frame = 0
Query:    3 NEVDEDKRPFRALLDVGITPTTTGHRVFGALKGAC--GAWTCSMVKRFPATTSEGKSY 58
            +EVDEDKRPFRALLDVG  PTTTGHRVFGALKG    G       KRFP    + K Y
Sbjct:  142 DEVDEDKRPFRALLDVGCNPTTTGHRVFGALKGGADGGLDIPHSEKRFPGYDRDAKEY 199          
BLAST of mRNA_H-akashiwo_Contig1036.6.1 vs. uniprot
Match: B7FPQ0_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FPQ0_PHATC)

HSP 1 Score: 71.6 bits (174), Expect = 9.400e-12
Identity = 37/58 (63.79%), Postives = 39/58 (67.24%), Query Frame = 0
Query:    3 NEVDEDKRPFRALLDVGITPTTTGHRVFGALKGAC--GAWTCSMVKRFPATTSEGKSY 58
            +EVDEDKRPFR LLDVG  PTTTGHRVFGALKGA   G       KRFP    + K Y
Sbjct:  142 DEVDEDKRPFRCLLDVGCKPTTTGHRVFGALKGAADGGLDIPHSEKRFPGFDRDSKEY 199          
BLAST of mRNA_H-akashiwo_Contig1036.6.1 vs. uniprot
Match: A0A448Z3Q5_9STRA (Ribosomal_L18_c domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z3Q5_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 1.800e-11
Identity = 36/57 (63.16%), Postives = 39/57 (68.42%), Query Frame = 0
Query:    4 EVDEDKRPFRALLDVGITPTTTGHRVFGALKGAC--GAWTCSMVKRFPATTSEGKSY 58
            EVD+DKRPFRALLDVG  PTTTGHR+FGALKGA   G       KRFP    + K Y
Sbjct:  143 EVDDDKRPFRALLDVGCKPTTTGHRLFGALKGAADGGLDVPHSEKRFPGYDRDAKEY 199          
BLAST of mRNA_H-akashiwo_Contig1036.6.1 vs. uniprot
Match: A0A7S4I3S1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I3S1_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 1.300e-10
Identity = 34/57 (59.65%), Postives = 39/57 (68.42%), Query Frame = 0
Query:    4 EVDEDKRPFRALLDVGITPTTTGHRVFGALKGAC--GAWTCSMVKRFPATTSEGKSY 58
            EVD++KRPFRALLDVG   TTTG+R+FGALKGA   G       KRFP    +GK Y
Sbjct:    1 EVDDEKRPFRALLDVGCKATTTGNRIFGALKGAADGGLDVPHNEKRFPGYDRDGKEY 57          
BLAST of mRNA_H-akashiwo_Contig1036.6.1 vs. uniprot
Match: A0A7S1YPP2_9STRA (Hypothetical protein n=4 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S1YPP2_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 2.310e-10
Identity = 36/58 (62.07%), Postives = 39/58 (67.24%), Query Frame = 0
Query:    3 NEVDEDKRPFRALLDVGITPTTTGHRVFGALKGAC--GAWTCSMVKRFPATTSEGKSY 58
            +EVDEDKRPFRALLDVG   TTTG R+FGALKGA   G       KRFP    +GK Y
Sbjct:  142 DEVDEDKRPFRALLDVGCKTTTTGCRIFGALKGAADGGLDIPHSEKRFPGYDRDGKDY 199          
BLAST of mRNA_H-akashiwo_Contig1036.6.1 vs. uniprot
Match: A0A7S2JWI3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JWI3_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 3.370e-10
Identity = 34/58 (58.62%), Postives = 40/58 (68.97%), Query Frame = 0
Query:    3 NEVDEDKRPFRALLDVGITPTTTGHRVFGALKGAC--GAWTCSMVKRFPATTSEGKSY 58
            +EVD+DK+PFRALLD+G+ PTTTG RVFGALKGA   G       KRFP    + K Y
Sbjct:  107 DEVDDDKKPFRALLDIGLKPTTTGCRVFGALKGAADGGLDIPHNEKRFPGYDRDAKEY 164          
BLAST of mRNA_H-akashiwo_Contig1036.6.1 vs. uniprot
Match: A0A7S2S5W4_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S5W4_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 4.370e-10
Identity = 35/58 (60.34%), Postives = 39/58 (67.24%), Query Frame = 0
Query:    3 NEVDEDKRPFRALLDVGITPTTTGHRVFGALKGAC--GAWTCSMVKRFPATTSEGKSY 58
            +EVDED+RPFRALLDVG   TTTG R+FGALKGA   G       KRFP    +GK Y
Sbjct:  142 DEVDEDRRPFRALLDVGCRATTTGCRIFGALKGAADGGLDVPHSEKRFPGYDRDGKEY 199          
BLAST of mRNA_H-akashiwo_Contig1036.6.1 vs. uniprot
Match: A0A7S1YV59_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YV59_TRICV)

HSP 1 Score: 67.0 bits (162), Expect = 4.370e-10
Identity = 35/58 (60.34%), Postives = 38/58 (65.52%), Query Frame = 0
Query:    3 NEVDEDKRPFRALLDVGITPTTTGHRVFGALKGAC--GAWTCSMVKRFPATTSEGKSY 58
            +EVDEDKRPFR LLDVG  PTTTG R+FGALKGA   G       KRFP    + K Y
Sbjct:  142 DEVDEDKRPFRCLLDVGCRPTTTGCRIFGALKGAADGGLDIPHTEKRFPGYDRDSKEY 199          
BLAST of mRNA_H-akashiwo_Contig1036.6.1 vs. uniprot
Match: A0A836CBG0_9STRA (RL5, ribosomal protein 5 60S large ribosomal subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBG0_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 4.690e-10
Identity = 37/65 (56.92%), Postives = 42/65 (64.62%), Query Frame = 0
Query:    4 EVDEDKRPFRALLDVGITPTTTGHRVFGALKGAC--GAWTCSMVKRFPATTSEGKSYGGRAQAHH 66
            EVDEDKRPFRALLDVGI  T+TG RVFGA+KGA   G       KRFP    + K +   A+ HH
Sbjct:  143 EVDEDKRPFRALLDVGIVATSTGARVFGAMKGAADGGLDIPHSEKRFPGYDRDSKEFD--AEVHH 205          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1036.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6V1PSZ3_HETAK9.190e-1877.59Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A1E7FFB1_9STRA6.930e-1263.79RL5, ribosomal protein 5 60S large ribosomal subun... [more]
B7FPQ0_PHATC9.400e-1263.79Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A448Z3Q5_9STRA1.800e-1163.16Ribosomal_L18_c domain-containing protein n=1 Tax=... [more]
A0A7S4I3S1_9STRA1.300e-1059.65Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A7S1YPP2_9STRA2.310e-1062.07Hypothetical protein n=4 Tax=Lithodesmiaceae TaxID... [more]
A0A7S2JWI3_9STRA3.370e-1058.62Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2S5W4_9STRA4.370e-1060.34Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S1YV59_TRICV4.370e-1060.34Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A836CBG0_9STRA4.690e-1056.92RL5, ribosomal protein 5 60S large ribosomal subun... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.420.100coord: 2..73
e-value: 2.9E-11
score: 45.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 99..134
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..167
IPR005485Ribosomal protein L5 eukaryotic/L18 archaealPFAMPF17144Ribosomal_L5ecoord: 3..38
e-value: 1.9E-10
score: 41.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1036contigH-akashiwo_Contig1036:376997..377500 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1036.6.1mRNA_H-akashiwo_Contig1036.6.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig1036 376773..378367 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig1036.6.1 ID=prot_H-akashiwo_Contig1036.6.1|Name=mRNA_H-akashiwo_Contig1036.6.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=168bp
MPNEVDEDKRPFRALLDVGITPTTTGHRVFGALKGACGAWTCSMVKRFPA
TTSEGKSYGGRAQAHHGQPREGVHGVPAGGGSRAVQDALCQVPRERLGPG
RVRGGHLRGAREDPGGPQPRREGRAREVRRQVCEQEARQSAPAQEPRQAG
DGRAGAPGGSGRGGGRG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005485Rbsml_L5_euk/L18_arc