mRNA_H-akashiwo_Contig1024.5.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1024.5.1 vs. uniprot
Match: A0A7S3Y0G4_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0G4_HETAK) HSP 1 Score: 162 bits (410), Expect = 5.600e-48 Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 2 Query: 2 PMQLRCLILTGSTDKSFSVGRDLKISHLHETSERRLKYLKLGGQAVQAIHDLEVPTIACVEGQCTGWGLELALACDLR 235 PMQLRCLILTGSTDKSFSVGRDLKISHLHETSERRLKYLKLGGQAVQAIHDLEVPTIACVEGQCTGWGLELALACDLR Sbjct: 79 PMQLRCLILTGSTDKSFSVGRDLKISHLHETSERRLKYLKLGGQAVQAIHDLEVPTIACVEGQCTGWGLELALACDLR 156
BLAST of mRNA_H-akashiwo_Contig1024.5.1 vs. uniprot
Match: A0A836CB75_9STRA (ClpP/crotonase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB75_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 2.630e-20 Identity = 42/78 (53.85%), Postives = 54/78 (69.23%), Query Frame = 2 Query: 2 PMQLRCLILTGSTDKSFSVGRDLKISHLHETSERRLKYLKLGGQAVQAIHDLEVPTIACVEGQCTGWGLELALACDLR 235 P QLRC++L S+DK+FS GRDLK+S H T E+R YL + A+H L PTIAC+ G GWG+E+ALACD+R Sbjct: 52 PGQLRCVMLRSSSDKAFSAGRDLKLSAKHTTEEQRRDYLLNCVDSANAMHQLRAPTIACMTGAAYGWGVEVALACDIR 129
BLAST of mRNA_H-akashiwo_Contig1024.5.1 vs. uniprot
Match: W7U9P9_9STRA (3-hydroxybutyryl-dehydratase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U9P9_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 1.420e-19 Identity = 43/76 (56.58%), Postives = 56/76 (73.68%), Query Frame = 2 Query: 8 QLRCLILTGSTDKSFSVGRDLKISHLHETSERRLKYLKLGGQAVQAIHDLEVPTIACVEGQCTGWGLELALACDLR 235 ++R ++TG T ++FS GRDLK S LH T E+R +Y+KL +V A+H L +PTIAC+ G GWGLELALACDLR Sbjct: 105 KVRVCVVTGGT-RAFSTGRDLKDSKLHTTLEKRERYMKLALDSVMAVHRLPLPTIACLSGPAFGWGLELALACDLR 179
BLAST of mRNA_H-akashiwo_Contig1024.5.1 vs. uniprot
Match: A0A3D6DPW1_9PROT (Enoyl-CoA hydratase n=1 Tax=Candidatus Accumulibacter sp. TaxID=2053492 RepID=A0A3D6DPW1_9PROT) HSP 1 Score: 72.4 bits (176), Expect = 1.670e-13 Identity = 36/77 (46.75%), Postives = 50/77 (64.94%), Query Frame = 2 Query: 8 QLRCLILTGSTDKSFSVGRDLK-ISHLHETSERRLKYLKLGGQAVQAIHDLEVPTIACVEGQCTGWGLELALACDLR 235 QLRC+IL G D++F+ G D++ +T ER + Y G+A+QA+ D +PTIA V+G C G GLE+A CDLR Sbjct: 47 QLRCVILRGDGDQAFAAGGDIEEFLSRRDTLERAMAYHAQVGEALQAVFDCRLPTIALVQGACIGGGLEIAAQCDLR 123
BLAST of mRNA_H-akashiwo_Contig1024.5.1 vs. uniprot
Match: UPI001668640E (enoyl-CoA hydratase-related protein n=1 Tax=Terasakiella brassicae TaxID=1634917 RepID=UPI001668640E) HSP 1 Score: 66.2 bits (160), Expect = 3.370e-11 Identity = 34/76 (44.74%), Postives = 50/76 (65.79%), Query Frame = 2 Query: 11 LRCLILTGSTDKSFSVGRDLKISHLHETSERRLK-YLKLGGQAVQAIHDLEVPTIACVEGQCTGWGLELALACDLR 235 LRCLIL G+ D++F+ G D+ +S + K Y ++ + VQAI + + PTIA ++G CTG GLE+A ACD+R Sbjct: 48 LRCLILRGAGDEAFAAGADISEFPEQRSSAAQAKAYGEVVTRTVQAIEECQHPTIAMIKGACTGGGLEIACACDMR 123
BLAST of mRNA_H-akashiwo_Contig1024.5.1 vs. uniprot
Match: A0A355B038_9BACT (Enoyl-CoA hydratase n=1 Tax=Nitrospinae bacterium TaxID=2026769 RepID=A0A355B038_9BACT) HSP 1 Score: 66.2 bits (160), Expect = 3.400e-11 Identity = 33/73 (45.21%), Postives = 45/73 (61.64%), Query Frame = 2 Query: 17 CLILTGSTDKSFSVGRDLKISHLHETSERRLKYLKLGGQAVQAIHDLEVPTIACVEGQCTGWGLELALACDLR 235 C++L ++FS GRDLK S H T E +Y LG + V +L +PTIA + G GWG+E+ALACD+R Sbjct: 51 CVVLLTGEGRAFSTGRDLKESASH-TKEDADRYQLLGMETVTKWENLPMPTIAAINGHAFGWGMEIALACDIR 122
BLAST of mRNA_H-akashiwo_Contig1024.5.1 vs. uniprot
Match: A0A1H4GYU5_9BACI (Enoyl-CoA hydratase/carnithine racemase n=2 Tax=Thalassobacillus TaxID=331971 RepID=A0A1H4GYU5_9BACI) HSP 1 Score: 65.9 bits (159), Expect = 4.720e-11 Identity = 35/74 (47.30%), Postives = 45/74 (60.81%), Query Frame = 2 Query: 14 RCLILTGSTDKSFSVGRDLKISHLHETSERRLKYLKLGGQAVQAIHDLEVPTIACVEGQCTGWGLELALACDLR 235 RCLI+TGS K+F G DLK T + ++ + L G + + +EVPTIA + G G GLELALACDLR Sbjct: 50 RCLIITGSGGKAFCAGADLK-ERAGMTEQEVVETVTLIGDTIHRVEQIEVPTIAVLNGVAFGGGLELALACDLR 122
BLAST of mRNA_H-akashiwo_Contig1024.5.1 vs. uniprot
Match: A0A661BRA8_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661BRA8_9GAMM) HSP 1 Score: 64.7 bits (156), Expect = 1.280e-10 Identity = 36/74 (48.65%), Postives = 45/74 (60.81%), Query Frame = 2 Query: 11 LRCLILTGSTDKSFSVGRDLKISHLHETSERRLKYLKLGGQAV-QAIHDLEVPTIACVEGQCTGWGLELALACD 229 +RCLI+TG+ DKSF G D+K + S ++ + L GQ V AI L VP IACV G G G+EL LACD Sbjct: 50 IRCLIITGAGDKSFVAGADIK--EMQNMSPQQARTLSNRGQEVFNAIEQLAVPVIACVNGFALGGGMELVLACD 121
BLAST of mRNA_H-akashiwo_Contig1024.5.1 vs. uniprot
Match: A0A850KCM8_9HYPH (Enoyl-CoA hydratase/isomerase family protein n=1 Tax=Methylocystaceae bacterium TaxID=2052174 RepID=A0A850KCM8_9HYPH) HSP 1 Score: 63.5 bits (153), Expect = 3.370e-10 Identity = 33/76 (43.42%), Postives = 48/76 (63.16%), Query Frame = 2 Query: 11 LRCLILTGSTDKSFSVGRDLKISHLHETSERRLK-YLKLGGQAVQAIHDLEVPTIACVEGQCTGWGLELALACDLR 235 LRC+IL G+ D +F+ G D+ +S + K Y + + V+AI + + PTIA ++G CTG GLE+A ACDLR Sbjct: 48 LRCIILRGAGDDAFAAGADISEFPEERSSAAQAKAYGDIVTRTVKAIEECQHPTIAMIKGACTGGGLEIACACDLR 123
BLAST of mRNA_H-akashiwo_Contig1024.5.1 vs. uniprot
Match: A0A241WAA0_9GAMM (Enoyl-CoA hydratase n=1 Tax=Acinetobacter sp. ANC 3813 TaxID=1977873 RepID=A0A241WAA0_9GAMM) HSP 1 Score: 63.2 bits (152), Expect = 4.560e-10 Identity = 32/75 (42.67%), Postives = 42/75 (56.00%), Query Frame = 2 Query: 11 LRCLILTGSTDKSFSVGRDLKISHLHETSERRLKYLKLGGQAVQAIHDLEVPTIACVEGQCTGWGLELALACDLR 235 LR I TG ++F G D+ H ++ER L ++ G Q IH L PT+AC++G G GLELALAC R Sbjct: 45 LRAAIFTGDGTQAFCAGADITELQ-HRSAERHLDTIRKGQNLFQQIHQLNFPTLACIQGAALGGGLELALACTFR 118 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1024.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1024.5.1 >prot_H-akashiwo_Contig1024.5.1 ID=prot_H-akashiwo_Contig1024.5.1|Name=mRNA_H-akashiwo_Contig1024.5.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=78bp MQLRCLILTGSTDKSFSVGRDLKISHLHETSERRLKYLKLGGQAVQAIHDback to top mRNA from alignment at H-akashiwo_Contig1024:268789..269535- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1024.5.1 ID=mRNA_H-akashiwo_Contig1024.5.1|Name=mRNA_H-akashiwo_Contig1024.5.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=747bp|location=Sequence derived from alignment at H-akashiwo_Contig1024:268789..269535- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1024:268789..269535- >mRNA_H-akashiwo_Contig1024.5.1 ID=mRNA_H-akashiwo_Contig1024.5.1|Name=mRNA_H-akashiwo_Contig1024.5.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=234bp|location=Sequence derived from alignment at H-akashiwo_Contig1024:268789..269535- (Heterosigma akashiwo CCMP452)back to top |