mRNA_H-akashiwo_Contig1009.4.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1009.4.1 vs. uniprot
Match: A0A7S4DCB7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DCB7_HETAK) HSP 1 Score: 342 bits (878), Expect = 3.740e-114 Identity = 171/307 (55.70%), Postives = 222/307 (72.31%), Query Frame = 1 Query: 1 IGKILEFLVLQRLVYWEQQSNVYGRSTYGFEQGKTHLDAVGEIVSNVERAFSRKKVAILIRMDVKQAFPSAWHPAIFNTLIQGKCQPDIVLLLKSFLTNRISELLFSGARKRKFHTASTAQGARLSPNLWKAVNIYISNAIGNWLAQA--RQEGLIVSFADDNSILIIGPSEKSLSNRASDLISFIKHAMMKFKIFFDLSSDKIEIMGFSRRRKT----WFPNVHEIDYDNNHVTLPVKKETKLLGVWLDSWLTWHQELAVVAQKSLSTLFELKRIVKTTWGLSGEIVRELYEKVIRPSILVNVALW 903 IGKILEFL+LQRL++WEQ + +Y GFEQG +H +AVG I + VE AF + +VAILIR+DV+QAFPSAWHPAIF TLI+GKC D++LLL+SFLT+R+S+L F G R +AST QGAR+SPNLWKAVN +I + +W + Q G+ ++FADDNS+L+ G SE++LS ASDL++ + H++ KIFF LS DK+EI GFSRR+ T WFP V DY + VK TKLLG+ LDS L W + AQK L LFELK IVK+TWGLSG+I+++LYEKVI P++L NV++W Sbjct: 39 IGKILEFLILQRLIWWEQTTGIYNEYQSGFEQGSSHTEAVGRIANLVENAFRKGQVAILIRLDVEQAFPSAWHPAIFQTLIEGKCPTDVILLLRSFLTDRVSQLFFHGERYGVPLSASTVQGARVSPNLWKAVNHHIYLCLLDWFSSNFWEQSGVTITFADDNSVLLTGSSERNLSLAASDLVTHLTHSLAPLKIFFGLSKDKMEICGFSRRKYTSEEKWFPVVPIEDYAGTLIEFEVKHSTKLLGITLDSKLNWSHAIEDAAQKGLKILFELKSIVKSTWGLSGDIIKKLYEKVIVPTVLANVSIW 345
BLAST of mRNA_H-akashiwo_Contig1009.4.1 vs. uniprot
Match: A0A023EX80_TRIIF (Putative non-ltr retrotransposon cats (Fragment) n=1 Tax=Triatoma infestans TaxID=30076 RepID=A0A023EX80_TRIIF) HSP 1 Score: 119 bits (299), Expect = 1.880e-26 Identity = 83/300 (27.67%), Postives = 137/300 (45.67%), Query Frame = 1 Query: 4 GKILEFLVLQRLVYWEQQSNVYGRSTYGFEQGKTHLDAVGEIVSNVERAFSRKKVAILIRMDVKQAFPSAWHPAIFNTLIQGKCQPDIVLLLKSFLTNRISELLFSGARKRKFHTASTAQGARLSPNLWKAVNIYISNAIGNWLAQARQEGLIVSFADDNSILIIGPSEKSLSNRASDLISFIKHAMMKFKIFFDLSSDKIEIMGFSRRRKTWFPNVHEIDYDNNHVTLPVKKETKLLGVWLDSWLTWHQELAVVAQKSLSTLFELKRIVKTTWGLSGEIVRELYEKVIRPSILVNVALW 903 GK+LE L++ R++++ Q NV YGF+ DA+ + VE + S K +LI +DV+ AF +AW PAI L KC ++ L + + + R + L ++ T QG+ P W I V+FADD +++ G S L +A+D++ I + +I F S +K ++ +RR + ++ N+ L V +E K LGV L+S W+ + V K + + L R K WGL + +R +YE P +L + +W Sbjct: 500 GKLLEKLMINRIMHFLYQQNVLSDKQYGFKPQSNTTDALLAVKDFVESSLSSKMQVLLISLDVEGAFDAAWWPAILWQLQVYKCPKNLYKLTEDYFSGRSARLKMETCEVKRKVTRGCPQGSCSGPGFW------IIQFDSLLKLAYPPNSTAVAFADDYLLMVAGRSIAELEVKANDILKQISDWSVISRINF--SKEKSCVLYVARRL-----SAVDLCLKVNNFQLKVVEEFKYLGVTLNSAWNWNSHIKAVTDKCIGFVNTLSRSAKVHWGLGQDALRVIYEGAFIPMVLYGIPIW 786
BLAST of mRNA_H-akashiwo_Contig1009.4.1 vs. uniprot
Match: UPI001F14024C (uncharacterized protein LOC124543462 n=1 Tax=Vanessa cardui TaxID=171605 RepID=UPI001F14024C) HSP 1 Score: 119 bits (299), Expect = 2.060e-26 Identity = 82/302 (27.15%), Postives = 148/302 (49.01%), Query Frame = 1 Query: 1 IGKILEFLVLQRLVYWEQQSNVYGRSTYGFEQGKTHLDAVGEIVSNVERAFSRKKVAILIRMDVKQAFPSAWHPAIFNTLIQGKCQPDIVLLLKSFLTNRISELLFSGARKRKFHTASTAQGARLSPNLWKAVNIYISNAIGNWLAQARQEGLIV-SFADDNSILIIGPSEKSLSNRASDLISFIKHAMMKFKIFFDLSSDKIEIMGFSRRRKTWFPNVHEIDYDNNHVTLPVKKETKLLGVWLDSWLTWHQELAVVAQKSLSTLFELKRIVKTTWGLSGEIVRELYEKVIRPSILVNVALW 903 +GKI+E L++ RL Y S YGF + DA+ ++V ++++ KK+ +L+ +D++ AF +AW PA+ L++ C ++ L+ S+L +R + ++ A K T QG+ P W + + + L + +G+ +FADD ++ L A ++ ++ + K+ F + K M +++ K P +H + VT E KLLG+ +DS LT++ ++ +K+ +L K TWGL+GEIVR +Y VI P +L ++W Sbjct: 498 LGKIVEKLLVGRLQY--HLLPTLHPSQYGFMPQRGTEDALYDLVGHIQKEIRSKKIVLLVSLDIEGAFDNAWWPALKKQLVKKHCPRNLYALVTSYLQDRRVIVNYARATSEKGTTKGCVQGSIGGPTFWNLI-------LDSLLHEMATKGVYCQAFADDVVLVFSNHHTSQLQATAESTLAAVQEWGTENKLSF--APHKTNAMVLTKKLKYDAPVIHMCGTPLSLVT-----EIKLLGLIIDSKLTFNAHVSATCKKAADIYKQLACAAKVTWGLNGEIVRTIYVAVIEPIVLYAASVW 783
BLAST of mRNA_H-akashiwo_Contig1009.4.1 vs. uniprot
Match: A0A821URS8_9NEOP (Hypothetical protein n=1 Tax=Pieris macdunnoughi TaxID=345717 RepID=A0A821URS8_9NEOP) HSP 1 Score: 119 bits (297), Expect = 2.380e-26 Identity = 77/302 (25.50%), Postives = 150/302 (49.67%), Query Frame = 1 Query: 1 IGKILEFLVLQRLVYWEQQSNVYGRSTYGFEQGKTHLDAVGEIVSNVERAFSRKKVAILIRMDVKQAFPSAWHPAIFNTLIQGKCQPDIVLLLKSFLTNRISELLFSGARKRKFHTASTAQGARLSPNLWKAVNIYISNAIGNWLAQARQEGLIV-SFADDNSILIIGPSEKSLSNRASDLISFIKHAMMKFKIFFDLSSDKIEIMGFSRRRKTWFPNVHEIDYDNNHVTLPVKKETKLLGVWLDSWLTWHQELAVVAQKSLSTLFELKRIVKTTWGLSGEIVRELYEKVIRPSILVNVALW 903 +GKILE +++ R+ + R YGF GK+ DA+ +I++ K++ +++ +D++ AF +AW PAI L + C + L+++ + R + ++ + QG+ P W NI + L + ++G +FADD ++ G S+ NRA+ + +++ ++ K+ F + K + M +RR K P + D + ++KE KLLG+ +D LT+++ + V +K+ ++ R+ K WG++G++V ++Y+ VI P + A W Sbjct: 319 MGKILEKVIINRIRH--SLLPRMSRRQYGFMPGKSTEDALYDILTKARSHIKNKEIVLMVSLDIEGAFDNAWWPAIKYQLAKKDCPKQLRLVVEDYFKGRRVVVRYANREHVRQPEKGCIQGSISGPTFW---NILLDPL----LVELEEDGTYAQAFADDVVLMFSGTDTHSIENRANVALEYVRKWGIENKLNF--APQKTKAMVLTRRLKFDTPRIRMNGQD-----IIMEKEIKLLGLTIDDGLTFNKHVQNVTRKAADIQKKIARMAKLEWGMTGDMVHQVYQAVIEPIVTYASAAW 604
BLAST of mRNA_H-akashiwo_Contig1009.4.1 vs. uniprot
Match: A0A194QZG8_PAPMA (Retrovirus-related Pol polyprotein from type-1 retrotransposable element R1 n=1 Tax=Papilio machaon TaxID=76193 RepID=A0A194QZG8_PAPMA) HSP 1 Score: 116 bits (291), Expect = 1.980e-25 Identity = 77/302 (25.50%), Postives = 150/302 (49.67%), Query Frame = 1 Query: 1 IGKILEFLVLQRLVYWEQQSNVYGRSTYGFEQGKTHLDAVGEIVSNVERAFSRKKVAILIRMDVKQAFPSAWHPAIFNTLIQGKCQPDIVLLLKSFLTNRISELLFSGARKRKFHTASTAQGARLSPNLWKAVNIYISNAIGNWLAQARQEGL-IVSFADDNSILIIGPSEKSLSNRASDLISFIKHAMMKFKIFFDLSSDKIEIMGFSRRRKTWFPNVHEIDYDNNHVTLPVKKETKLLGVWLDSWLTWHQELAVVAQKSLSTLFELKRIVKTTWGLSGEIVRELYEKVIRPSILVNVALW 903 +GKILE ++++R V W + R YGF + D++ +++ ++ R+K+ +L+ +D++ AF +AW PA+ +L +C ++ L + + RI + ++GA + T QG+ P LW + + L + G+ +FADD ++ G S + A+ + ++ ++ K+ F + K + M +R+ K P ++ ++ + K K+LG+ +D LT++ + V K+LS +L K +WGL+ EI+R +Y V+ P IL ++W Sbjct: 496 MGKILEKMLVRR-VRWHTAPMI-SRRQYGFMPQRGTEDSLYDMIQHIRAEVERRKLVVLVSLDIEGAFDNAWWPAVRCSLAATRCPVNLRRLFDHYFSERIVRVRYAGAEWTRRPTKGCVQGSIGGPTLWNLL-------LNPLLVELEDMGIHCQAFADDVVLMFSGDSSTEIQGGANAALDHVRKWGVRNKLNF--APQKTKAMVITRKIKYDSPRLNM-----GGRSIELTKCMKILGLTVDDRLTFNAHIRAVCTKALSLHRQLSTAAKISWGLNPEIIRTIYVAVVEPIILYAASVW 781
BLAST of mRNA_H-akashiwo_Contig1009.4.1 vs. uniprot
Match: A0A4Y2H3D7_ARAVE (Reverse transcriptase domain-containing protein n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2H3D7_ARAVE) HSP 1 Score: 114 bits (285), Expect = 2.110e-25 Identity = 86/300 (28.67%), Postives = 147/300 (49.00%), Query Frame = 1 Query: 4 GKILEFLVLQRLVYWEQQSNVYGRSTYGFEQGKTHLDAVGEIVSNVERAFSRKKVAILIRMDVKQAFPSAWHPAIFNTLIQGKCQPDIVLLLKSFLTNRISELLFSGARKRKFHTASTAQGARLSPNLWKAVNIYISNAIGNWLAQARQEGLIVSFADDNSILIIGPSEKSLSNRASDLISFIKHAMMKFKIFFDLSSDKIEIMGFSRRRKTWFPNVHEIDYDNNHVTLPVKKETKLLGVWLDSWLTWHQELAVVAQKSLSTLFELKRIVKTTWGLSGEIVRELYEKVIRPSILVNVALW 903 GKIL+ L+ QRLV++ + +N+ S YGF +G L A+ E+ ++ A + V LI +D+K AF S I N L K ++ L +SFL +RI +F + ++ Q + P LW + ++N L R++ +FADD ++LI + S + ++IS + +F + F + K IM R+ T FP ++ ++ +E K LG+ D ++ L V +K + +L+RI++ TWGL E+V+E+Y ++ IL V +W Sbjct: 67 GKILDRLMAQRLVFYLETNNLLDHSQYGFREGMGTLAALKEVNKFIDSAKNENLVTCLISLDIKYAFNSIRWVDIINLLKLYKIPVKLLKLFRSFLNDRI---IFLEIGNKFYYNIGVPQCSSCGPILW----LIVANEALK-LFPEREDIRAQAFADDFAVLIKASASYKFSEISKNIISGFESWACRFNLRFSENKTKY-IMFKVRKNITHFPGIYLYGKRISYT-----REMKYLGIDFDPNHSFMVHLQRVQEKIIRINEKLRRIIRATWGLRPEMVKEVYLTILERIILYGVEIW 352
BLAST of mRNA_H-akashiwo_Contig1009.4.1 vs. uniprot
Match: UPI0018C21F71 (uncharacterized protein LOC119629799 n=1 Tax=Bombyx mori TaxID=7091 RepID=UPI0018C21F71) HSP 1 Score: 115 bits (289), Expect = 3.570e-25 Identity = 76/302 (25.17%), Postives = 153/302 (50.66%), Query Frame = 1 Query: 1 IGKILEFLVLQRLVYWEQQSNVYGRSTYGFEQGKTHLDAVGEIVSNVERAFSRKKVAILIRMDVKQAFPSAWHPAIFNTLIQGKCQPDIVLLLKSFLTNRISELLFSGARKRKFHTASTAQGARLSPNLWKAVNIYISNAIGNWLAQARQEG-LIVSFADDNSILIIGPSEKSLSNRASDLISFIKHAMMKFKIFFDLSSDKIEIMGFSRRRKTWFPNVHEIDYDNNHVTLPVKKETKLLGVWLDSWLTWHQELAVVAQKSLSTLFELKRIVKTTWGLSGEIVRELYEKVIRPSILVNVALW 903 +GKILE +++ R + W + R YGF ++ D++ +++ + +KK+ ++ +D++ AF SAW PA+ L + +C +I ++ S+L++R + ++G K T QG+ P LW + + L + + G +FADD ++ S + +A+ +++++ ++ K+ F + K M +R+ K P + V + + KE K+LG+ +DS LT++ +A + +K+L+ +L R K +WGL +++R +Y V+ P I+ + W Sbjct: 185 MGKILEKMMVNR-IKWHVLPRMSTRQ-YGFMPQRSTEDSLYDLIQYIREKLKQKKLITMVSLDIEGAFDSAWWPAVRTRLAEERCPINIRRVMDSYLSDRSVRVRYAGEEVTKSTTKGCVQGSIGGPILWNLL-------LDPLLKELEKRGDYCQAFADDVVLVFDADSALEIQRQANAALAYVRDWGIRNKLTF--APHKTYAMVLTRKLKYDTPVL-----SMGGVGVRMSKEIKVLGLIIDSKLTFNSHVANICKKALNLYKQLSRAAKISWGLHPDVIRTIYVAVVEPVIMYASSAW 470
BLAST of mRNA_H-akashiwo_Contig1009.4.1 vs. uniprot
Match: UPI001E27DFBC (uncharacterized protein LOC123689373 n=2 Tax=Pieris rapae TaxID=64459 RepID=UPI001E27DFBC) HSP 1 Score: 113 bits (283), Expect = 1.910e-24 Identity = 71/278 (25.54%), Postives = 139/278 (50.00%), Query Frame = 1 Query: 73 RSTYGFEQGKTHLDAVGEIVSNVERAFSRKKVAILIRMDVKQAFPSAWHPAIFNTLIQGKCQPDIVLLLKSFLTNRISELLFSGARKRKFHTASTAQGARLSPNLWKAVNIYISNAIGNWLAQARQEGLIV-SFADDNSILIIGPSEKSLSNRASDLISFIKHAMMKFKIFFDLSSDKIEIMGFSRRRKTWFPNVHEIDYDNNHVTLPVKKETKLLGVWLDSWLTWHQELAVVAQKSLSTLFELKRIVKTTWGLSGEIVRELYEKVIRPSILVNVALW 903 R YGF GK+ DA+ +I++ K++ +++ +D++ AF +AW PAI L + C + L+++ + R + ++ + QG+ P W NI + L + ++G +FADD +L G S++ RA+ + +++ ++ K+ F + K + M +RR K P + D + ++KE KLLG+ +D LT+++ + V +K+ ++ R+ K WG++G++V ++Y+ VI P++ A W Sbjct: 3 RRQYGFMPGKSTEDALYDILTKARSHIENKEIVLMVSLDIEGAFDNAWWPAIKYQLSKKDCPKQLRLVVEDYFKGRKVVVRYANREHVRRPEKGCIQGSISGPTFW---NILLDPL----LVELEEDGTYAQAFADDVVLLFSGTDTHSIAQRANVALEYVRKWGIENKLNF--APQKTKAMVLTRRLKFDTPIIRMNGQD-----IAIEKEIKLLGLTIDGGLTFNKHVHNVTRKAAEIYKKVSRMAKLEWGMTGDMVLQVYQAVIEPTVTYASAAW 266
BLAST of mRNA_H-akashiwo_Contig1009.4.1 vs. uniprot
Match: UPI001E664823 (uncharacterized protein LOC123722259 n=3 Tax=Papilio machaon TaxID=76193 RepID=UPI001E664823) HSP 1 Score: 114 bits (284), Expect = 1.930e-24 Identity = 74/301 (24.58%), Postives = 151/301 (50.17%), Query Frame = 1 Query: 1 IGKILEFLVLQRLVYWEQQSNVYGRSTYGFEQGKTHLDAVGEIVSNVERAFSRKKVAILIRMDVKQAFPSAWHPAIFNTLIQGKCQPDIVLLLKSFLTNRISELLFSGARKRKFHTASTAQGARLSPNLWKAVNIYISNAIGNWLAQARQEGLIVSFADDNSILIIGPSEKSLSNRASDLISFIKHAMMKFKIFFDLSSDKIEIMGFSRRRKTWFPNVHEIDYDNNHVTLPVKKETKLLGVWLDSWLTWHQELAVVAQKSLSTLFELKRIVKTTWGLSGEIVRELYEKVIRPSILVNVALW 903 +GK+LE ++++R V W + R YGF + D++ +++ ++ ++++ +LI +D++ AF +AW PA+ +L + +C ++ L + ++RI + ++G+ + T QG+ P LW + + +G + + +FADD ++ G S + + A+ + ++ ++ K+ F ++ K M F+R+ K P + H+ L K+LG+ +D LT+++ + VA K +L K +WGL+ EIVR +Y V+ P +L ++W Sbjct: 992 MGKVLEKMLVRR-VRWHTAPMI-SRHQYGFMPQRGTEDSLYDMIQHIRAEVEKRRLVVLISLDIEGAFDNAWWPAVRCSLAETRCPVNLRRLFDHYFSDRIVRVRYAGSEWTRKPTKGCVQGSIGGPTLWNLLLNPLLVELGEMGVRCQ------AFADDVVLMFSGNSTEDIQGAANVALDHVQGWGVRNKLKF--AAHKTRAMVFTRKLKYDSPR---LSMGGGHIELVTS--LKILGLTVDDGLTFNKHIQNVAIKVQKLYRQLSTAAKISWGLNPEIVRTIYVAVVEPIVLYAASVW 1277
BLAST of mRNA_H-akashiwo_Contig1009.4.1 vs. uniprot
Match: UPI001E2709D3 (uncharacterized protein LOC123658921 n=1 Tax=Melitaea cinxia TaxID=113334 RepID=UPI001E2709D3) HSP 1 Score: 110 bits (274), Expect = 3.880e-23 Identity = 88/303 (29.04%), Postives = 150/303 (49.50%), Query Frame = 1 Query: 1 IGKILEFLVLQRLVYWEQQSNVYGRST--YGFEQGKTHLDAVGEIVSNVERAFSRKKVAILIRMDVKQAFPSAWHPAIFNTLIQGKCQPDIVLLLKSFLTNRISELLFSGARKRKFHTASTAQGARLSPNLWKAVNIYISNAIGNWLAQARQEGLIVSFADDNSILIIGPSEKSLSNRASDLISFIKHAMMKFKIFFDLSSDKIEIMGFSRRRKTWFPNVHEIDYDNNHVTLPVKKETKLLGVWLDSWLTWHQELAVVAQKSLSTLFELKRIVKTTWGLSGEIVRELYEKVIRPSILVNVALW 903 +GKILE +++ RL Y V ST +GF ++ DA+ +V ++ + +RKK+A+L+ +D++ AF SAW P I L + +C I LL S+L++R + + + G H T +G W + A G++ AQA FADD +L G + + RA+ + ++ K+ F + K M +R+ K P + V + + E KLLGV +D LT++ +A V +++++ +L R + +WGL E++R +Y V+ P IL A+W Sbjct: 912 LGKILEKMLVARLQY----HLVPRLSTRQFGFMPQRSTEDALYTLVEHIRCSLNRKKIAVLVSLDIEGAFDSAWWPKIKERLAEERCPDSIRWLLGSYLSDRRARVRYLGEE----HMRDTGKGCVQ----WGLSEM---EAKGDY-AQA--------FADDVVLLFEGETALEIERRANAALERVRAWGQSNKLRF--APHKTNAMLVTRKLKYDTPRLRM-----GGVDVVLSSEIKLLGVVIDHKLTFNGHVANVCKRAVAFYHQLARAARASWGLHPEVIRTIYRAVVEPVILYAAAVW 1183 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1009.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1009.4.1 >prot_H-akashiwo_Contig1009.4.1 ID=prot_H-akashiwo_Contig1009.4.1|Name=mRNA_H-akashiwo_Contig1009.4.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=301bp IGKILEFLVLQRLVYWEQQSNVYGRSTYGFEQGKTHLDAVGEIVSNVERAback to top mRNA from alignment at H-akashiwo_Contig1009:190310..191212- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1009.4.1 ID=mRNA_H-akashiwo_Contig1009.4.1|Name=mRNA_H-akashiwo_Contig1009.4.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=903bp|location=Sequence derived from alignment at H-akashiwo_Contig1009:190310..191212- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1009:190310..191212- >mRNA_H-akashiwo_Contig1009.4.1 ID=mRNA_H-akashiwo_Contig1009.4.1|Name=mRNA_H-akashiwo_Contig1009.4.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=903bp|location=Sequence derived from alignment at H-akashiwo_Contig1009:190310..191212- (Heterosigma akashiwo CCMP452)back to top |