mRNA_H-akashiwo_Contig1009.4.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1009.4.1
Unique NamemRNA_H-akashiwo_Contig1009.4.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig1009.4.1 vs. uniprot
Match: A0A7S4DCB7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DCB7_HETAK)

HSP 1 Score: 342 bits (878), Expect = 3.740e-114
Identity = 171/307 (55.70%), Postives = 222/307 (72.31%), Query Frame = 1
Query:    1 IGKILEFLVLQRLVYWEQQSNVYGRSTYGFEQGKTHLDAVGEIVSNVERAFSRKKVAILIRMDVKQAFPSAWHPAIFNTLIQGKCQPDIVLLLKSFLTNRISELLFSGARKRKFHTASTAQGARLSPNLWKAVNIYISNAIGNWLAQA--RQEGLIVSFADDNSILIIGPSEKSLSNRASDLISFIKHAMMKFKIFFDLSSDKIEIMGFSRRRKT----WFPNVHEIDYDNNHVTLPVKKETKLLGVWLDSWLTWHQELAVVAQKSLSTLFELKRIVKTTWGLSGEIVRELYEKVIRPSILVNVALW 903
            IGKILEFL+LQRL++WEQ + +Y     GFEQG +H +AVG I + VE AF + +VAILIR+DV+QAFPSAWHPAIF TLI+GKC  D++LLL+SFLT+R+S+L F G R     +AST QGAR+SPNLWKAVN +I   + +W +     Q G+ ++FADDNS+L+ G SE++LS  ASDL++ + H++   KIFF LS DK+EI GFSRR+ T    WFP V   DY    +   VK  TKLLG+ LDS L W   +   AQK L  LFELK IVK+TWGLSG+I+++LYEKVI P++L NV++W
Sbjct:   39 IGKILEFLILQRLIWWEQTTGIYNEYQSGFEQGSSHTEAVGRIANLVENAFRKGQVAILIRLDVEQAFPSAWHPAIFQTLIEGKCPTDVILLLRSFLTDRVSQLFFHGERYGVPLSASTVQGARVSPNLWKAVNHHIYLCLLDWFSSNFWEQSGVTITFADDNSVLLTGSSERNLSLAASDLVTHLTHSLAPLKIFFGLSKDKMEICGFSRRKYTSEEKWFPVVPIEDYAGTLIEFEVKHSTKLLGITLDSKLNWSHAIEDAAQKGLKILFELKSIVKSTWGLSGDIIKKLYEKVIVPTVLANVSIW 345          
BLAST of mRNA_H-akashiwo_Contig1009.4.1 vs. uniprot
Match: A0A023EX80_TRIIF (Putative non-ltr retrotransposon cats (Fragment) n=1 Tax=Triatoma infestans TaxID=30076 RepID=A0A023EX80_TRIIF)

HSP 1 Score: 119 bits (299), Expect = 1.880e-26
Identity = 83/300 (27.67%), Postives = 137/300 (45.67%), Query Frame = 1
Query:    4 GKILEFLVLQRLVYWEQQSNVYGRSTYGFEQGKTHLDAVGEIVSNVERAFSRKKVAILIRMDVKQAFPSAWHPAIFNTLIQGKCQPDIVLLLKSFLTNRISELLFSGARKRKFHTASTAQGARLSPNLWKAVNIYISNAIGNWLAQARQEGLIVSFADDNSILIIGPSEKSLSNRASDLISFIKHAMMKFKIFFDLSSDKIEIMGFSRRRKTWFPNVHEIDYDNNHVTLPVKKETKLLGVWLDSWLTWHQELAVVAQKSLSTLFELKRIVKTTWGLSGEIVRELYEKVIRPSILVNVALW 903
            GK+LE L++ R++++  Q NV     YGF+      DA+  +   VE + S K   +LI +DV+ AF +AW PAI   L   KC  ++  L + + + R + L       ++  T    QG+   P  W      I                 V+FADD  +++ G S   L  +A+D++  I    +  +I F  S +K  ++  +RR      +  ++    N+  L V +E K LGV L+S   W+  +  V  K +  +  L R  K  WGL  + +R +YE    P +L  + +W
Sbjct:  500 GKLLEKLMINRIMHFLYQQNVLSDKQYGFKPQSNTTDALLAVKDFVESSLSSKMQVLLISLDVEGAFDAAWWPAILWQLQVYKCPKNLYKLTEDYFSGRSARLKMETCEVKRKVTRGCPQGSCSGPGFW------IIQFDSLLKLAYPPNSTAVAFADDYLLMVAGRSIAELEVKANDILKQISDWSVISRINF--SKEKSCVLYVARRL-----SAVDLCLKVNNFQLKVVEEFKYLGVTLNSAWNWNSHIKAVTDKCIGFVNTLSRSAKVHWGLGQDALRVIYEGAFIPMVLYGIPIW 786          
BLAST of mRNA_H-akashiwo_Contig1009.4.1 vs. uniprot
Match: UPI001F14024C (uncharacterized protein LOC124543462 n=1 Tax=Vanessa cardui TaxID=171605 RepID=UPI001F14024C)

HSP 1 Score: 119 bits (299), Expect = 2.060e-26
Identity = 82/302 (27.15%), Postives = 148/302 (49.01%), Query Frame = 1
Query:    1 IGKILEFLVLQRLVYWEQQSNVYGRSTYGFEQGKTHLDAVGEIVSNVERAFSRKKVAILIRMDVKQAFPSAWHPAIFNTLIQGKCQPDIVLLLKSFLTNRISELLFSGARKRKFHTASTAQGARLSPNLWKAVNIYISNAIGNWLAQARQEGLIV-SFADDNSILIIGPSEKSLSNRASDLISFIKHAMMKFKIFFDLSSDKIEIMGFSRRRKTWFPNVHEIDYDNNHVTLPVKKETKLLGVWLDSWLTWHQELAVVAQKSLSTLFELKRIVKTTWGLSGEIVRELYEKVIRPSILVNVALW 903
            +GKI+E L++ RL Y          S YGF   +   DA+ ++V ++++    KK+ +L+ +D++ AF +AW PA+   L++  C  ++  L+ S+L +R   + ++ A   K  T    QG+   P  W  +       + + L +   +G+   +FADD  ++        L   A   ++ ++    + K+ F  +  K   M  +++ K   P +H      + VT     E KLLG+ +DS LT++  ++   +K+     +L    K TWGL+GEIVR +Y  VI P +L   ++W
Sbjct:  498 LGKIVEKLLVGRLQY--HLLPTLHPSQYGFMPQRGTEDALYDLVGHIQKEIRSKKIVLLVSLDIEGAFDNAWWPALKKQLVKKHCPRNLYALVTSYLQDRRVIVNYARATSEKGTTKGCVQGSIGGPTFWNLI-------LDSLLHEMATKGVYCQAFADDVVLVFSNHHTSQLQATAESTLAAVQEWGTENKLSF--APHKTNAMVLTKKLKYDAPVIHMCGTPLSLVT-----EIKLLGLIIDSKLTFNAHVSATCKKAADIYKQLACAAKVTWGLNGEIVRTIYVAVIEPIVLYAASVW 783          
BLAST of mRNA_H-akashiwo_Contig1009.4.1 vs. uniprot
Match: A0A821URS8_9NEOP (Hypothetical protein n=1 Tax=Pieris macdunnoughi TaxID=345717 RepID=A0A821URS8_9NEOP)

HSP 1 Score: 119 bits (297), Expect = 2.380e-26
Identity = 77/302 (25.50%), Postives = 150/302 (49.67%), Query Frame = 1
Query:    1 IGKILEFLVLQRLVYWEQQSNVYGRSTYGFEQGKTHLDAVGEIVSNVERAFSRKKVAILIRMDVKQAFPSAWHPAIFNTLIQGKCQPDIVLLLKSFLTNRISELLFSGARKRKFHTASTAQGARLSPNLWKAVNIYISNAIGNWLAQARQEGLIV-SFADDNSILIIGPSEKSLSNRASDLISFIKHAMMKFKIFFDLSSDKIEIMGFSRRRKTWFPNVHEIDYDNNHVTLPVKKETKLLGVWLDSWLTWHQELAVVAQKSLSTLFELKRIVKTTWGLSGEIVRELYEKVIRPSILVNVALW 903
            +GKILE +++ R+ +         R  YGF  GK+  DA+ +I++        K++ +++ +D++ AF +AW PAI   L +  C   + L+++ +   R   + ++     +       QG+   P  W   NI +       L +  ++G    +FADD  ++  G    S+ NRA+  + +++   ++ K+ F  +  K + M  +RR K   P +     D     + ++KE KLLG+ +D  LT+++ +  V +K+     ++ R+ K  WG++G++V ++Y+ VI P +    A W
Sbjct:  319 MGKILEKVIINRIRH--SLLPRMSRRQYGFMPGKSTEDALYDILTKARSHIKNKEIVLMVSLDIEGAFDNAWWPAIKYQLAKKDCPKQLRLVVEDYFKGRRVVVRYANREHVRQPEKGCIQGSISGPTFW---NILLDPL----LVELEEDGTYAQAFADDVVLMFSGTDTHSIENRANVALEYVRKWGIENKLNF--APQKTKAMVLTRRLKFDTPRIRMNGQD-----IIMEKEIKLLGLTIDDGLTFNKHVQNVTRKAADIQKKIARMAKLEWGMTGDMVHQVYQAVIEPIVTYASAAW 604          
BLAST of mRNA_H-akashiwo_Contig1009.4.1 vs. uniprot
Match: A0A194QZG8_PAPMA (Retrovirus-related Pol polyprotein from type-1 retrotransposable element R1 n=1 Tax=Papilio machaon TaxID=76193 RepID=A0A194QZG8_PAPMA)

HSP 1 Score: 116 bits (291), Expect = 1.980e-25
Identity = 77/302 (25.50%), Postives = 150/302 (49.67%), Query Frame = 1
Query:    1 IGKILEFLVLQRLVYWEQQSNVYGRSTYGFEQGKTHLDAVGEIVSNVERAFSRKKVAILIRMDVKQAFPSAWHPAIFNTLIQGKCQPDIVLLLKSFLTNRISELLFSGARKRKFHTASTAQGARLSPNLWKAVNIYISNAIGNWLAQARQEGL-IVSFADDNSILIIGPSEKSLSNRASDLISFIKHAMMKFKIFFDLSSDKIEIMGFSRRRKTWFPNVHEIDYDNNHVTLPVKKETKLLGVWLDSWLTWHQELAVVAQKSLSTLFELKRIVKTTWGLSGEIVRELYEKVIRPSILVNVALW 903
            +GKILE ++++R V W     +  R  YGF   +   D++ +++ ++     R+K+ +L+ +D++ AF +AW PA+  +L   +C  ++  L   + + RI  + ++GA   +  T    QG+   P LW  +       +   L +    G+   +FADD  ++  G S   +   A+  +  ++   ++ K+ F  +  K + M  +R+ K   P ++         ++ + K  K+LG+ +D  LT++  +  V  K+LS   +L    K +WGL+ EI+R +Y  V+ P IL   ++W
Sbjct:  496 MGKILEKMLVRR-VRWHTAPMI-SRRQYGFMPQRGTEDSLYDMIQHIRAEVERRKLVVLVSLDIEGAFDNAWWPAVRCSLAATRCPVNLRRLFDHYFSERIVRVRYAGAEWTRRPTKGCVQGSIGGPTLWNLL-------LNPLLVELEDMGIHCQAFADDVVLMFSGDSSTEIQGGANAALDHVRKWGVRNKLNF--APQKTKAMVITRKIKYDSPRLNM-----GGRSIELTKCMKILGLTVDDRLTFNAHIRAVCTKALSLHRQLSTAAKISWGLNPEIIRTIYVAVVEPIILYAASVW 781          
BLAST of mRNA_H-akashiwo_Contig1009.4.1 vs. uniprot
Match: A0A4Y2H3D7_ARAVE (Reverse transcriptase domain-containing protein n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2H3D7_ARAVE)

HSP 1 Score: 114 bits (285), Expect = 2.110e-25
Identity = 86/300 (28.67%), Postives = 147/300 (49.00%), Query Frame = 1
Query:    4 GKILEFLVLQRLVYWEQQSNVYGRSTYGFEQGKTHLDAVGEIVSNVERAFSRKKVAILIRMDVKQAFPSAWHPAIFNTLIQGKCQPDIVLLLKSFLTNRISELLFSGARKRKFHTASTAQGARLSPNLWKAVNIYISNAIGNWLAQARQEGLIVSFADDNSILIIGPSEKSLSNRASDLISFIKHAMMKFKIFFDLSSDKIEIMGFSRRRKTWFPNVHEIDYDNNHVTLPVKKETKLLGVWLDSWLTWHQELAVVAQKSLSTLFELKRIVKTTWGLSGEIVRELYEKVIRPSILVNVALW 903
            GKIL+ L+ QRLV++ + +N+   S YGF +G   L A+ E+   ++ A +   V  LI +D+K AF S     I N L   K    ++ L +SFL +RI   +F     + ++     Q +   P LW    + ++N     L   R++    +FADD ++LI   +    S  + ++IS  +    +F + F  +  K  IM   R+  T FP ++      ++      +E K LG+  D   ++   L  V +K +    +L+RI++ TWGL  E+V+E+Y  ++   IL  V +W
Sbjct:   67 GKILDRLMAQRLVFYLETNNLLDHSQYGFREGMGTLAALKEVNKFIDSAKNENLVTCLISLDIKYAFNSIRWVDIINLLKLYKIPVKLLKLFRSFLNDRI---IFLEIGNKFYYNIGVPQCSSCGPILW----LIVANEALK-LFPEREDIRAQAFADDFAVLIKASASYKFSEISKNIISGFESWACRFNLRFSENKTKY-IMFKVRKNITHFPGIYLYGKRISYT-----REMKYLGIDFDPNHSFMVHLQRVQEKIIRINEKLRRIIRATWGLRPEMVKEVYLTILERIILYGVEIW 352          
BLAST of mRNA_H-akashiwo_Contig1009.4.1 vs. uniprot
Match: UPI0018C21F71 (uncharacterized protein LOC119629799 n=1 Tax=Bombyx mori TaxID=7091 RepID=UPI0018C21F71)

HSP 1 Score: 115 bits (289), Expect = 3.570e-25
Identity = 76/302 (25.17%), Postives = 153/302 (50.66%), Query Frame = 1
Query:    1 IGKILEFLVLQRLVYWEQQSNVYGRSTYGFEQGKTHLDAVGEIVSNVERAFSRKKVAILIRMDVKQAFPSAWHPAIFNTLIQGKCQPDIVLLLKSFLTNRISELLFSGARKRKFHTASTAQGARLSPNLWKAVNIYISNAIGNWLAQARQEG-LIVSFADDNSILIIGPSEKSLSNRASDLISFIKHAMMKFKIFFDLSSDKIEIMGFSRRRKTWFPNVHEIDYDNNHVTLPVKKETKLLGVWLDSWLTWHQELAVVAQKSLSTLFELKRIVKTTWGLSGEIVRELYEKVIRPSILVNVALW 903
            +GKILE +++ R + W     +  R  YGF   ++  D++ +++  +     +KK+  ++ +D++ AF SAW PA+   L + +C  +I  ++ S+L++R   + ++G    K  T    QG+   P LW  +       +   L +  + G    +FADD  ++    S   +  +A+  +++++   ++ K+ F  +  K   M  +R+ K   P +         V + + KE K+LG+ +DS LT++  +A + +K+L+   +L R  K +WGL  +++R +Y  V+ P I+   + W
Sbjct:  185 MGKILEKMMVNR-IKWHVLPRMSTRQ-YGFMPQRSTEDSLYDLIQYIREKLKQKKLITMVSLDIEGAFDSAWWPAVRTRLAEERCPINIRRVMDSYLSDRSVRVRYAGEEVTKSTTKGCVQGSIGGPILWNLL-------LDPLLKELEKRGDYCQAFADDVVLVFDADSALEIQRQANAALAYVRDWGIRNKLTF--APHKTYAMVLTRKLKYDTPVL-----SMGGVGVRMSKEIKVLGLIIDSKLTFNSHVANICKKALNLYKQLSRAAKISWGLHPDVIRTIYVAVVEPVIMYASSAW 470          
BLAST of mRNA_H-akashiwo_Contig1009.4.1 vs. uniprot
Match: UPI001E27DFBC (uncharacterized protein LOC123689373 n=2 Tax=Pieris rapae TaxID=64459 RepID=UPI001E27DFBC)

HSP 1 Score: 113 bits (283), Expect = 1.910e-24
Identity = 71/278 (25.54%), Postives = 139/278 (50.00%), Query Frame = 1
Query:   73 RSTYGFEQGKTHLDAVGEIVSNVERAFSRKKVAILIRMDVKQAFPSAWHPAIFNTLIQGKCQPDIVLLLKSFLTNRISELLFSGARKRKFHTASTAQGARLSPNLWKAVNIYISNAIGNWLAQARQEGLIV-SFADDNSILIIGPSEKSLSNRASDLISFIKHAMMKFKIFFDLSSDKIEIMGFSRRRKTWFPNVHEIDYDNNHVTLPVKKETKLLGVWLDSWLTWHQELAVVAQKSLSTLFELKRIVKTTWGLSGEIVRELYEKVIRPSILVNVALW 903
            R  YGF  GK+  DA+ +I++        K++ +++ +D++ AF +AW PAI   L +  C   + L+++ +   R   + ++     +       QG+   P  W   NI +       L +  ++G    +FADD  +L  G    S++ RA+  + +++   ++ K+ F  +  K + M  +RR K   P +     D     + ++KE KLLG+ +D  LT+++ +  V +K+     ++ R+ K  WG++G++V ++Y+ VI P++    A W
Sbjct:    3 RRQYGFMPGKSTEDALYDILTKARSHIENKEIVLMVSLDIEGAFDNAWWPAIKYQLSKKDCPKQLRLVVEDYFKGRKVVVRYANREHVRRPEKGCIQGSISGPTFW---NILLDPL----LVELEEDGTYAQAFADDVVLLFSGTDTHSIAQRANVALEYVRKWGIENKLNF--APQKTKAMVLTRRLKFDTPIIRMNGQD-----IAIEKEIKLLGLTIDGGLTFNKHVHNVTRKAAEIYKKVSRMAKLEWGMTGDMVLQVYQAVIEPTVTYASAAW 266          
BLAST of mRNA_H-akashiwo_Contig1009.4.1 vs. uniprot
Match: UPI001E664823 (uncharacterized protein LOC123722259 n=3 Tax=Papilio machaon TaxID=76193 RepID=UPI001E664823)

HSP 1 Score: 114 bits (284), Expect = 1.930e-24
Identity = 74/301 (24.58%), Postives = 151/301 (50.17%), Query Frame = 1
Query:    1 IGKILEFLVLQRLVYWEQQSNVYGRSTYGFEQGKTHLDAVGEIVSNVERAFSRKKVAILIRMDVKQAFPSAWHPAIFNTLIQGKCQPDIVLLLKSFLTNRISELLFSGARKRKFHTASTAQGARLSPNLWKAVNIYISNAIGNWLAQARQEGLIVSFADDNSILIIGPSEKSLSNRASDLISFIKHAMMKFKIFFDLSSDKIEIMGFSRRRKTWFPNVHEIDYDNNHVTLPVKKETKLLGVWLDSWLTWHQELAVVAQKSLSTLFELKRIVKTTWGLSGEIVRELYEKVIRPSILVNVALW 903
            +GK+LE ++++R V W     +  R  YGF   +   D++ +++ ++     ++++ +LI +D++ AF +AW PA+  +L + +C  ++  L   + ++RI  + ++G+   +  T    QG+   P LW  +   +   +G    + +      +FADD  ++  G S + +   A+  +  ++   ++ K+ F  ++ K   M F+R+ K   P    +     H+ L      K+LG+ +D  LT+++ +  VA K      +L    K +WGL+ EIVR +Y  V+ P +L   ++W
Sbjct:  992 MGKVLEKMLVRR-VRWHTAPMI-SRHQYGFMPQRGTEDSLYDMIQHIRAEVEKRRLVVLISLDIEGAFDNAWWPAVRCSLAETRCPVNLRRLFDHYFSDRIVRVRYAGSEWTRKPTKGCVQGSIGGPTLWNLLLNPLLVELGEMGVRCQ------AFADDVVLMFSGNSTEDIQGAANVALDHVQGWGVRNKLKF--AAHKTRAMVFTRKLKYDSPR---LSMGGGHIELVTS--LKILGLTVDDGLTFNKHIQNVAIKVQKLYRQLSTAAKISWGLNPEIVRTIYVAVVEPIVLYAASVW 1277          
BLAST of mRNA_H-akashiwo_Contig1009.4.1 vs. uniprot
Match: UPI001E2709D3 (uncharacterized protein LOC123658921 n=1 Tax=Melitaea cinxia TaxID=113334 RepID=UPI001E2709D3)

HSP 1 Score: 110 bits (274), Expect = 3.880e-23
Identity = 88/303 (29.04%), Postives = 150/303 (49.50%), Query Frame = 1
Query:    1 IGKILEFLVLQRLVYWEQQSNVYGRST--YGFEQGKTHLDAVGEIVSNVERAFSRKKVAILIRMDVKQAFPSAWHPAIFNTLIQGKCQPDIVLLLKSFLTNRISELLFSGARKRKFHTASTAQGARLSPNLWKAVNIYISNAIGNWLAQARQEGLIVSFADDNSILIIGPSEKSLSNRASDLISFIKHAMMKFKIFFDLSSDKIEIMGFSRRRKTWFPNVHEIDYDNNHVTLPVKKETKLLGVWLDSWLTWHQELAVVAQKSLSTLFELKRIVKTTWGLSGEIVRELYEKVIRPSILVNVALW 903
            +GKILE +++ RL Y      V   ST  +GF   ++  DA+  +V ++  + +RKK+A+L+ +D++ AF SAW P I   L + +C   I  LL S+L++R + + + G      H   T +G       W    +    A G++ AQA        FADD  +L  G +   +  RA+  +  ++      K+ F  +  K   M  +R+ K   P +         V + +  E KLLGV +D  LT++  +A V +++++   +L R  + +WGL  E++R +Y  V+ P IL   A+W
Sbjct:  912 LGKILEKMLVARLQY----HLVPRLSTRQFGFMPQRSTEDALYTLVEHIRCSLNRKKIAVLVSLDIEGAFDSAWWPKIKERLAEERCPDSIRWLLGSYLSDRRARVRYLGEE----HMRDTGKGCVQ----WGLSEM---EAKGDY-AQA--------FADDVVLLFEGETALEIERRANAALERVRAWGQSNKLRF--APHKTNAMLVTRKLKYDTPRLRM-----GGVDVVLSSEIKLLGVVIDHKLTFNGHVANVCKRAVAFYHQLARAARASWGLHPEVIRTIYRAVVEPVILYAAAVW 1183          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1009.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4DCB7_HETAK3.740e-11455.70Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A023EX80_TRIIF1.880e-2627.67Putative non-ltr retrotransposon cats (Fragment) n... [more]
UPI001F14024C2.060e-2627.15uncharacterized protein LOC124543462 n=1 Tax=Vanes... [more]
A0A821URS8_9NEOP2.380e-2625.50Hypothetical protein n=1 Tax=Pieris macdunnoughi T... [more]
A0A194QZG8_PAPMA1.980e-2525.50Retrovirus-related Pol polyprotein from type-1 ret... [more]
A0A4Y2H3D7_ARAVE2.110e-2528.67Reverse transcriptase domain-containing protein n=... [more]
UPI0018C21F713.570e-2525.17uncharacterized protein LOC119629799 n=1 Tax=Bomby... [more]
UPI001E27DFBC1.910e-2425.54uncharacterized protein LOC123689373 n=2 Tax=Pieri... [more]
UPI001E6648231.930e-2424.58uncharacterized protein LOC123722259 n=3 Tax=Papil... [more]
UPI001E2709D33.880e-2329.04uncharacterized protein LOC123658921 n=1 Tax=Melit... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1009contigH-akashiwo_Contig1009:190310..191212 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog225117.XP_009351357.1
PFAMsRVT_1
Model size903
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons1
Evalue9.39e-26
EggNOG OGsKOG1075@1|root,KOG1075@2759|Eukaryota
DescriptionRibonuclease H protein
Cds size903
COG categoryE
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387048.9677124-CDS-H-akashiwo_Contig1009:190309..1912121681387048.9677124-CDS-H-akashiwo_Contig1009:190309..191212Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1009 190310..191212 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1009.4.1prot_H-akashiwo_Contig1009.4.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1009 190310..191212 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1009.4.1

>prot_H-akashiwo_Contig1009.4.1 ID=prot_H-akashiwo_Contig1009.4.1|Name=mRNA_H-akashiwo_Contig1009.4.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=301bp
IGKILEFLVLQRLVYWEQQSNVYGRSTYGFEQGKTHLDAVGEIVSNVERA
FSRKKVAILIRMDVKQAFPSAWHPAIFNTLIQGKCQPDIVLLLKSFLTNR
ISELLFSGARKRKFHTASTAQGARLSPNLWKAVNIYISNAIGNWLAQARQ
EGLIVSFADDNSILIIGPSEKSLSNRASDLISFIKHAMMKFKIFFDLSSD
KIEIMGFSRRRKTWFPNVHEIDYDNNHVTLPVKKETKLLGVWLDSWLTWH
QELAVVAQKSLSTLFELKRIVKTTWGLSGEIVRELYEKVIRPSILVNVAL
W
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mRNA from alignment at H-akashiwo_Contig1009:190310..191212-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1009.4.1 ID=mRNA_H-akashiwo_Contig1009.4.1|Name=mRNA_H-akashiwo_Contig1009.4.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=903bp|location=Sequence derived from alignment at H-akashiwo_Contig1009:190310..191212- (Heterosigma akashiwo CCMP452)
ATCGGGAAAATCCTGGAGTTTCTCGTACTCCAACGGCTTGTATACTGGGA GCAACAATCGAACGTCTACGGCCGATCTACGTATGGCTTTGAACAAGGCA AAACACACCTGGACGCTGTTGGAGAGATTGTCTCAAACGTTGAACGTGCT TTCTCGAGAAAGAAAGTGGCTATCCTTATAAGAATGGATGTGAAACAGGC GTTCCCGAGCGCCTGGCACCCGGCCATTTTCAACACCTTGATACAAGGTA AATGTCAACCGGACATAGTATTATTGTTGAAAAGTTTTCTAACCAATCGC ATTTCGGAGCTACTTTTTTCAGGGGCCAGAAAACGAAAATTTCACACGGC ATCGACCGCACAAGGGGCGAGACTCTCTCCTAACCTCTGGAAAGCGGTGA ATATTTATATTTCAAACGCAATCGGTAACTGGCTTGCGCAGGCAAGACAG GAGGGACTCATAGTCTCGTTCGCTGACGACAATTCCATACTCATCATCGG TCCCTCAGAGAAGTCTCTGTCAAACAGAGCATCAGATTTAATCTCCTTCA TAAAACATGCGATGATGAAGTTTAAGATTTTCTTTGACCTATCTTCGGAC AAGATTGAAATCATGGGTTTCTCTCGGCGAAGGAAAACATGGTTCCCTAA TGTGCACGAAATCGACTACGATAACAACCACGTCACTCTTCCCGTGAAGA AGGAAACCAAACTGCTGGGTGTGTGGCTAGATTCGTGGCTCACCTGGCAC CAGGAATTGGCAGTGGTAGCACAAAAATCGCTATCTACCCTTTTCGAACT GAAGAGAATCGTCAAGACTACATGGGGGTTATCTGGAGAGATTGTTCGGG AATTGTATGAGAAAGTCATACGTCCATCGATATTAGTGAACGTTGCGTTG TGG
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Coding sequence (CDS) from alignment at H-akashiwo_Contig1009:190310..191212-

>mRNA_H-akashiwo_Contig1009.4.1 ID=mRNA_H-akashiwo_Contig1009.4.1|Name=mRNA_H-akashiwo_Contig1009.4.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=903bp|location=Sequence derived from alignment at H-akashiwo_Contig1009:190310..191212- (Heterosigma akashiwo CCMP452)
ATCGGGAAAATCCTGGAGTTTCTCGTACTCCAACGGCTTGTATACTGGGA
GCAACAATCGAACGTCTACGGCCGATCTACGTATGGCTTTGAACAAGGCA
AAACACACCTGGACGCTGTTGGAGAGATTGTCTCAAACGTTGAACGTGCT
TTCTCGAGAAAGAAAGTGGCTATCCTTATAAGAATGGATGTGAAACAGGC
GTTCCCGAGCGCCTGGCACCCGGCCATTTTCAACACCTTGATACAAGGTA
AATGTCAACCGGACATAGTATTATTGTTGAAAAGTTTTCTAACCAATCGC
ATTTCGGAGCTACTTTTTTCAGGGGCCAGAAAACGAAAATTTCACACGGC
ATCGACCGCACAAGGGGCGAGACTCTCTCCTAACCTCTGGAAAGCGGTGA
ATATTTATATTTCAAACGCAATCGGTAACTGGCTTGCGCAGGCAAGACAG
GAGGGACTCATAGTCTCGTTCGCTGACGACAATTCCATACTCATCATCGG
TCCCTCAGAGAAGTCTCTGTCAAACAGAGCATCAGATTTAATCTCCTTCA
TAAAACATGCGATGATGAAGTTTAAGATTTTCTTTGACCTATCTTCGGAC
AAGATTGAAATCATGGGTTTCTCTCGGCGAAGGAAAACATGGTTCCCTAA
TGTGCACGAAATCGACTACGATAACAACCACGTCACTCTTCCCGTGAAGA
AGGAAACCAAACTGCTGGGTGTGTGGCTAGATTCGTGGCTCACCTGGCAC
CAGGAATTGGCAGTGGTAGCACAAAAATCGCTATCTACCCTTTTCGAACT
GAAGAGAATCGTCAAGACTACATGGGGGTTATCTGGAGAGATTGTTCGGG
AATTGTATGAGAAAGTCATACGTCCATCGATATTAGTGAACGTTGCGTTG
TGG
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