mRNA_H-akashiwo_Contig1007.9.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1007.9.1 vs. uniprot
Match: A0A7S3UVC1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVC1_HETAK) HSP 1 Score: 254 bits (650), Expect = 7.080e-84 Identity = 130/141 (92.20%), Postives = 130/141 (92.20%), Query Frame = 1 Query: 1 LIGALAWLTCCTAPTLATAVNRLAQFLVAPTELHWAAAIAVLAYARQHLDELELEIGGRGLEIRGYVDADFALDRDRKSTSGYVFFIGHTTLSWASRKQKGIVLHSTHAELNALLEAGKEALHLRQLCGFLLLLLQRDQFP 423 LIGAL WLTCCTAPTLATAVNRLAQFLVAPTELHWAAAIAVLAYA QHLDEL GG GLEIRGY DADFA DRDRKSTSGYVFFIGHTTLSWASRKQKGIVLHSTHAELNALLEAGKE LHLRQLCGFLLLLLQ DQFP Sbjct: 34 LIGALTWLTCCTAPTLATAVNRLAQFLVAPTELHWAAAIAVLAYAHQHLDELXXXXGGGGLEIRGYADADFARDRDRKSTSGYVFFIGHTTLSWASRKQKGIVLHSTHAELNALLEAGKETLHLRQLCGFLLLLLQLDQFP 174
BLAST of mRNA_H-akashiwo_Contig1007.9.1 vs. uniprot
Match: H3GB69_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB69_PHYRM) HSP 1 Score: 123 bits (309), Expect = 9.880e-31 Identity = 80/202 (39.60%), Postives = 116/202 (57.43%), Query Frame = 1 Query: 1 LIGALAWLTCCTAPTLATAVNRLAQFLVAPTELHWAAAIAVLAYARQHLDELELEIGGRGLEIRGYVDADFALDRD-RKSTSGYVFFIGHTTLSWASRKQKGIVLHSTHAELNALLEAGKEALHLRQLCGFLLLLLQRDQFPPTITHQDNLSCVGLAEKGQLSSLTKHIDIKDLWIKQEIHEMKIVLVPVRTEHMLADVLTK 603 L+GAL +L CT P +A AV +A+F + HW AA +L Y + D + GG E+ GY DA++A D D R+ST+GYVFF+ + +SW S++Q + ST AE AL A +EA+ LRQL LL + + T QDN C+ LA+ S TKHID+K ++++++ + IVL T+ M+AD TK Sbjct: 97 LVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDLGLVFNGGTKGELIGYADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQL----LLDVGCECVGATTFFQDNQGCIALAKNPAYHSRTKHIDLKYHFLREKVEDKVIVLEYKPTDEMIADGFTK 294
BLAST of mRNA_H-akashiwo_Contig1007.9.1 vs. uniprot
Match: H3GB17_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB17_PHYRM) HSP 1 Score: 124 bits (310), Expect = 3.780e-30 Identity = 80/202 (39.60%), Postives = 115/202 (56.93%), Query Frame = 1 Query: 1 LIGALAWLTCCTAPTLATAVNRLAQFLVAPTELHWAAAIAVLAYARQHLDELELEIGGRGLEIRGYVDADFALDRD-RKSTSGYVFFIGHTTLSWASRKQKGIVLHSTHAELNALLEAGKEALHLRQLCGFLLLLLQRDQFPPTITHQDNLSCVGLAEKGQLSSLTKHIDIKDLWIKQEIHEMKIVLVPVRTEHMLADVLTK 603 L+GAL +L CT P +A AV +A+F + HW AA +L Y + D + GG E+ GY DA +A D D R+ST+GYVFF+ + +SW S++Q + ST AE AL A +EA+ LRQL LL + + T QDN C+ LA+ S TKHID+K ++++++ + IVL T+ M+AD TK Sbjct: 193 LVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDLGLVFNGGTKGELIGYADASWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQL----LLDVGCECVAATTIFQDNQGCIALAKNPAYHSRTKHIDLKYHFLREKVEDKVIVLEYKPTDEMIADGFTK 390
BLAST of mRNA_H-akashiwo_Contig1007.9.1 vs. uniprot
Match: A0A2P4XPH2_9STRA (RxLR effector candidate protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XPH2_9STRA) HSP 1 Score: 116 bits (290), Expect = 1.300e-28 Identity = 77/202 (38.12%), Postives = 113/202 (55.94%), Query Frame = 1 Query: 1 LIGALAWLTCCTAPTLATAVNRLAQFLVAPTELHWAAAIAVLAYARQHLDELELEIGGRGLEIRGYVDADFALDRD-RKSTSGYVFFIGHTTLSWASRKQKGIVLHSTHAELNALLEAGKEALHLRQLCGFLLLLLQRDQFPPTITHQDNLSCVGLAEKGQLSSLTKHIDIKDLWIKQEIHEMKIVLVPVRTEHMLADVLTK 603 L+GAL +L T P +A AV +A+F + HW AA +L Y + D + GG E+ GY DA++A D D R+ST+GYVFF+ + +SW S++Q + ST AE AL A +EA+ LRQL L L + T +QDN C+ LA+ + TKHIDIK ++++++ + L T+ M+AD TK Sbjct: 25 LVGALMYLATSTRPNIAYAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDVGLVFNGGIKGELVGYADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNAIQEAVWLRQL----LKDLGYENKGATTIYQDNQGCIALAKNPAYHTRTKHIDIKFHFLREKVESKTVELEYKPTDEMIADGFTK 222
BLAST of mRNA_H-akashiwo_Contig1007.9.1 vs. uniprot
Match: A0A085LNL9_9BILA (Uncharacterized protein n=2 Tax=Trichuris suis TaxID=68888 RepID=A0A085LNL9_9BILA) HSP 1 Score: 117 bits (292), Expect = 1.450e-28 Identity = 76/202 (37.62%), Postives = 117/202 (57.92%), Query Frame = 1 Query: 4 IGALAWLTCCTAPTLATAVNRLAQFLVAPTELHWAAAIAVLAYARQHLDELELEIGGRG-LEIRGYVDADFALDR-DRKSTSGYVFFIGHTTLSWASRKQKGIVLHSTHAELNALLEAGKEALHLRQLCGFLLLLLQRDQFPPTITHQDNLSCVGLAEKGQLSSLTKHIDIKDLWIKQEIHEMKIVLVPVRTEHMLADVLTK 603 +G+L +L + P +A AV +L + + +PT+ W A V+ Y + + +L G +++ G+VDAD+A D DRKSTSGYVF IGH+T++W+S+KQ + + ST AE A EA +E LRQL L ++ Q PT ++DN C+ +A+ + S TKHID++ ++ + LV + M ADVLTK Sbjct: 62 VGSLLYLATVSRPDIAFAVGQLCRRVESPTQSDWKAVKRVIRYLAGSVSQ-KLRFSSEGNIKLTGFVDADWAGDHADRKSTSGYVFQIGHSTIAWSSKKQSVVAMSSTEAEYVAASEACREVQWLRQL----LADMEVPQDGPTKIYEDNQGCIKVAQSDRCSQRTKHIDVRHHQLRDLCESGIVSLVYCPSSEMPADVLTK 258
BLAST of mRNA_H-akashiwo_Contig1007.9.1 vs. uniprot
Match: A0A4Y1ZX26_ARAVE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y1ZX26_ARAVE) HSP 1 Score: 115 bits (287), Expect = 7.140e-28 Identity = 76/203 (37.44%), Postives = 118/203 (58.13%), Query Frame = 1 Query: 1 LIGALAWLTCCTAPTLATAVNRLAQFLVAPTELHWAAAIAVLAYARQHLDE-LELEIGGRGLEIRGYVDADFA-LDRDRKSTSGYVFFIGHTTLSWASRKQKGIVLHSTHAELNALLEAGKEALHLRQLCGFLLLLLQRDQFPPTITHQDNLSCVGLAEKGQLSSLTKHIDIKDLWIKQEIHEMKIVLVPVRTEHMLADVLTK 603 LIG+L +L CT P +A ++++L+Q+L + HW AA VL Y ++ ++ L E+ + + GY D+D+ +DRKS Y F + ++ +SW SRKQK + L ST +E +L ++ KEAL+L++L L L + Q + DN S + LAE S TKHIDI+ +I+ + + KI + V T M AD+LTK Sbjct: 51 LIGSLNYLAVCTRPDIAYSISKLSQYLTCYGKSHWLAAERVLRYLKKTINYGLVFELDDK--VVYGYSDSDWGNYQKDRKSYFSYYFMLSNSVISWKSRKQKTVALSSTESEYMSLSDSCKEALYLQKLLSELDLGILYKQITINV---DNNSAIKLAENSLFHSRTKHIDIRQHFIRDVLEDGKIAVKHVSTSRMGADILTK 248
BLAST of mRNA_H-akashiwo_Contig1007.9.1 vs. uniprot
Match: A0A0P6IXK4_AEDAE (Putative copia-3 dwil-i (Fragment) n=1 Tax=Aedes aegypti TaxID=7159 RepID=A0A0P6IXK4_AEDAE) HSP 1 Score: 119 bits (299), Expect = 1.050e-27 Identity = 75/202 (37.13%), Postives = 119/202 (58.91%), Query Frame = 1 Query: 1 LIGALAWLTCCTAPTLATAVNRLAQFLVAPTELHWAAAIAVLAYARQHLDELELEIGGRGLEIRGYVDADFALD-RDRKSTSGYVFFIGHTTLSWASRKQKGIVLHSTHAELNALLEAGKEALHLRQLCGFLLLLLQRDQFPPTITHQDNLSCVGLAEKGQLSSLTKHIDIKDLWIKQEIHEMKIVLVPVRTEHMLADVLTK 603 L+GAL +++ P +A A + LA+ + PTE W AA V+ Y R L+ + L+ G + GY DAD++ D + RKSTSG+VF +G T ++W S++Q + L S +E AL EA +E L LR+L L L +Q PT+ H+DN SC+ ++ +KHI+ K+++++ + +I L + +E M+AD LTK Sbjct: 1100 LVGALLYISVNARPDIAVATSILARKVSQPTEADWTAAKRVVRYLRGTLNWI-LQFSGSAPTLMGYSDADWSGDHKTRKSTSGFVFTVGGTAVAWRSKQQSIVALSSMESEYVALSEATQEVLWLRRL----LADLGFEQKEPTVLHEDNQSCIAFVRSERVGKRSKHIETKEMFVRNLCEKGEITLQYLCSEEMIADALTK 1296
BLAST of mRNA_H-akashiwo_Contig1007.9.1 vs. uniprot
Match: UPI001781516D (secreted RxLR effector protein 161-like n=1 Tax=Rhagoletis pomonella TaxID=28610 RepID=UPI001781516D) HSP 1 Score: 114 bits (284), Expect = 1.420e-27 Identity = 75/205 (36.59%), Postives = 113/205 (55.12%), Query Frame = 1 Query: 4 IGALAWLTCCTAPTLATAVNRLAQFLVAPTELHWAAAIAVLAYARQHLDELELEIGGRGLEIRGYVDADFALDRD-RKSTSGYVFFIGHTTLSWASRKQKGIVLHSTHAELNALLEAGKEALHLRQLCGFLLLLLQRDQFPPT----ITHQDNLSCVGLAEKGQLSSLTKHIDIKDLWIKQEIHEMKIVLVPVRTEHMLADVLTK 603 IG L + T P ++ AVN L++F P + HWAA V+ Y + + + + + G+ D+D+A D D R+ST+GY+F + +SW +R+Q+ I L ST AE A+ A +EA L +L Q++ P T + H DN S + +A S TKH+DIKD +I+Q + KI LV + T+ MLAD+LTK Sbjct: 41 IGCLLFAAQTTRPDISFAVNLLSRFSTNPGKAHWAAVKRVMRYLKGTI-KYGISYNKEACNLTGFCDSDWASDLDERRSTTGYLFKLQDGPISWCTRRQRTIALSSTEAEFMAMTSAIQEATWLMRL--------QKELTPDTAETLVLHCDNKSAIQVALNNSYSPRTKHVDIKDKFIRQHLESGKIKLVYIPTKEMLADILTK 236
BLAST of mRNA_H-akashiwo_Contig1007.9.1 vs. uniprot
Match: A0A085N351_9BILA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Trichuris suis TaxID=68888 RepID=A0A085N351_9BILA) HSP 1 Score: 117 bits (292), Expect = 2.470e-27 Identity = 77/202 (38.12%), Postives = 117/202 (57.92%), Query Frame = 1 Query: 4 IGALAWLTCCTAPTLATAVNRLAQFLVAPTELHWAAAIAVLAYARQHLDELELEIGGRG-LEIRGYVDADFALDR-DRKSTSGYVFFIGHTTLSWASRKQKGIVLHSTHAELNALLEAGKEALHLRQLCGFLLLLLQRDQFPPTITHQDNLSCVGLAEKGQLSSLTKHIDIKDLWIKQEIHEMKIVLVPVRTEHMLADVLTK 603 +G+L +L + P +A AV +L + + +PT+ W A V+ Y + + +L G +++ G+VDAD+A D DRKSTSGYVF IGH+T++W+S+KQ + + ST AE A EA +E LRQL L ++ Q PT T++DN C+ +A+ + S TKHID+ ++ + LV + M ADVLTK Sbjct: 240 VGSLLYLATVSRPDIAFAVGQLCRRVESPTQSDWKAVKRVIRYLAGSVCQ-KLRFSSEGNIKLTGFVDADWAGDHADRKSTSGYVFQIGHSTIAWSSKKQSVVAMSSTEAEYAAASEACRELQWLRQL----LADMEVPQDGPTRTYEDNQGCIKVAQSDRCSQRTKHIDVSHHQLRDLCESGILSLVYCPSSEMPADVLTK 436
BLAST of mRNA_H-akashiwo_Contig1007.9.1 vs. uniprot
Match: A0A0A9Y059_LYGHE (Copia protein (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9Y059_LYGHE) HSP 1 Score: 117 bits (293), Expect = 2.540e-27 Identity = 77/205 (37.56%), Postives = 119/205 (58.05%), Query Frame = 1 Query: 1 LIGALAWLTCCTAPTLATAVNRLAQFLVAPTELHWAAAIAVLAYARQHLDELELEIGGRGLEIRGYVDADFALDR-DRKSTSGYVFFIGHTTLSWASRKQKGIVLHSTHAELNALLEAGKEALHLRQLCGFLLLLLQRDQFP---PTITHQDNLSCVGLAEKGQLSSLTKHIDIKDLWIKQEIHEMKIVLVPVRTEHMLADVLTK 603 LIG+L +L T P ++ AV+ L+QF + HW AA VL Y Q + L+ G + GY DAD+A + DR+S +GY F + +SW SRKQ+ + L +THAE AL +A KEA+HL+ LL++ +P P I + DN S L++ +SS +KHI +++ +I++ I + +I ++ V + M AD+LTK Sbjct: 273 LIGSLMYLAVATRPDISHAVSFLSQFNSCHGQEHWLAAKRVLRYL-QGTKHIGLKYSKHGRALHGYTDADWASCQIDRRSYTGYCFKYANAAISWESRKQRTVALATTHAEYMALTDAAKEAIHLK-------LLVKESGYPVTGPIIIYNDNESAENLSKNNVVSSRSKHIAVREHFIRETIQQGEIDVIHVPSGEMDADILTK 469 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1007.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1007.9.1 >prot_H-akashiwo_Contig1007.9.1 ID=prot_H-akashiwo_Contig1007.9.1|Name=mRNA_H-akashiwo_Contig1007.9.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=201bp LIGALAWLTCCTAPTLATAVNRLAQFLVAPTELHWAAAIAVLAYARQHLDback to top mRNA from alignment at H-akashiwo_Contig1007:251672..252274- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1007.9.1 ID=mRNA_H-akashiwo_Contig1007.9.1|Name=mRNA_H-akashiwo_Contig1007.9.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=603bp|location=Sequence derived from alignment at H-akashiwo_Contig1007:251672..252274- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1007:251672..252274- >mRNA_H-akashiwo_Contig1007.9.1 ID=mRNA_H-akashiwo_Contig1007.9.1|Name=mRNA_H-akashiwo_Contig1007.9.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=603bp|location=Sequence derived from alignment at H-akashiwo_Contig1007:251672..252274- (Heterosigma akashiwo CCMP452)back to top |