mRNA_H-akashiwo_Contig1004.1.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1004.1.1 vs. uniprot
Match: A0A6V1V4J2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1V4J2_HETAK) HSP 1 Score: 333 bits (854), Expect = 1.870e-112 Identity = 155/156 (99.36%), Postives = 156/156 (100.00%), Query Frame = 1 Query: 1 IGKSISGPIAGIYLNWFEEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQELLSHVNGQEKRIQFTMEREKNGVLAFLDLKMERVGEKVVTSVYRKDTHTFRYLHWRSNHPKKTKLGVMKCLIHRAHRLCDREEDLRWELGFLKDQFISNGYP 468 IGKSISGPIAGIYLNWFEEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQELLSHVNGQEKRIQFTMEREKNGVLAFLDLKMERVGEKVVTSVYRK+THTFRYLHWRSNHPKKTKLGVMKCLIHRAHRLCDREEDLRWELGFLKDQFISNGYP Sbjct: 207 IGKSISGPIAGIYLNWFEEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQELLSHVNGQEKRIQFTMEREKNGVLAFLDLKMERVGEKVVTSVYRKETHTFRYLHWRSNHPKKTKLGVMKCLIHRAHRLCDREEDLRWELGFLKDQFISNGYP 362
BLAST of mRNA_H-akashiwo_Contig1004.1.1 vs. uniprot
Match: UPI000CD7D1A2 (uncharacterized protein LOC111867609 n=1 Tax=Cryptotermes secundus TaxID=105785 RepID=UPI000CD7D1A2) HSP 1 Score: 139 bits (350), Expect = 3.090e-39 Identity = 68/156 (43.59%), Postives = 96/156 (61.54%), Query Frame = 1 Query: 1 IGKSISGPIAGIYLNWFEEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQELLSHVNGQEKRIQFTMEREKNGVLAFLDLKMERVGEKVVTSVYRKDTHTFRYLHWRSNHPKKTKLGVMKCLIHRAHRLCDREEDLRWELGFLKDQFISNGYP 468 +G S+S ++ I++ FE+ + S +HKP+LW+R DD F++W HG E LQ+ LSH+N IQFTME E +AFLD+ R V T VYRK THT+RYL++ SNHP K+G+++ L +RA C +DL E+G + NGYP Sbjct: 3 MGSSLSRIVSNIFIENFEKSSLQS--AQHKPSLWLRYIDDTFVVWPHGPEWLQDFLSHLNSLRPSIQFTMEIESESAIAFLDVVALRREATVATKVYRKPTHTYRYLNFNSNHPPLAKMGLIQSLHNRASTACQELQDLVKEIGSPRSDLQLNGYP 156
BLAST of mRNA_H-akashiwo_Contig1004.1.1 vs. uniprot
Match: A0A6L2P9Y1_COPFO (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Coptotermes formosanus TaxID=36987 RepID=A0A6L2P9Y1_COPFO) HSP 1 Score: 132 bits (331), Expect = 2.220e-35 Identity = 65/153 (42.48%), Postives = 101/153 (66.01%), Query Frame = 1 Query: 1 IGKSISGPIAGIYLNWFEEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQELLSHVNGQEKRIQFTMEREKNGVLAFLDLKMERVGEKVVTSVYRKDTHTFRYLHWRSNHPKKTKLGVMKCLIHRAHRLCDREEDLRWELGFLKDQFISN 459 +G S+S ++ IY+ +FE ++ KP+LW+R DD FIIW HG + LQ LL +++ K I+F+ME E NG L FL++ + + G+ + ++VYRK THT RYLH+ SNHP K GV++ L++RA+ LC E+DL+ E+ ++ +SN Sbjct: 79 MGSSLSPVVSNIYMEFFETLSLHG--WDMKPSLWLRYVDDTFIIWKHGVKYLQSLLDYLSSLRKSIKFSMEVESNGSLLFLNVFVTKKGDILHSAVYRKPTHTGRYLHFDSNHPVHVKRGVVESLVNRANVLCQNEQDLKAEMYTVRKGLLSN 229
BLAST of mRNA_H-akashiwo_Contig1004.1.1 vs. uniprot
Match: A0A2J7Q207_9NEOP (Reverse transcriptase domain-containing protein n=2 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7Q207_9NEOP) HSP 1 Score: 137 bits (346), Expect = 4.560e-35 Identity = 66/156 (42.31%), Postives = 97/156 (62.18%), Query Frame = 1 Query: 1 IGKSISGPIAGIYLNWFEEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQELLSHVNGQEKRIQFTMEREKNGVLAFLDLKMERVGEKVVTSVYRKDTHTFRYLHWRSNHPKKTKLGVMKCLIHRAHRLCDREEDLRWELGFLKDQFISNGYP 468 +G S+S ++ I++ FEE I D ++KP W+R DD F+IW +G E+LQ+ L H+N I+FTME E N L FLD+ + + G K+ T VYRK THT RYLH++SNHP K GV+ LI+RA +C ++D E+ ++ + + YP Sbjct: 242 MGNSLSPVVSNIFMEHFEE--IAIDTAEYKPAKWLRYVDDTFVIWPYGPEELQKFLQHINNIRPTIKFTMEVEVNNALPFLDVLVMKQGPKLTTKVYRKPTHTGRYLHFKSNHPHHVKRGVVHSLINRAKVICQNKKDFSKEIRNIRHDLMLSEYP 395
BLAST of mRNA_H-akashiwo_Contig1004.1.1 vs. uniprot
Match: A0A6J2YRR7_SITOR (uncharacterized protein LOC115889567 n=1 Tax=Sitophilus oryzae TaxID=7048 RepID=A0A6J2YRR7_SITOR) HSP 1 Score: 130 bits (327), Expect = 9.140e-34 Identity = 67/155 (43.23%), Postives = 93/155 (60.00%), Query Frame = 1 Query: 1 IGKSISGPIAGIYLNWFEEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQELLSHVNGQEKRIQFTMEREKNGVLAFLDLKMERVGEKVVTSVYRKDTHTFRYLHWRSNHPKKTKLGVMKCLIHRAHRLCDREEDLRWELGFLKDQFISNGY 465 +G IS IA ++ FEE+ + S K P +W R DD F++W HG + L + L H+N Q I+FTME E N LAFLD+ ++R G+ + +VYRK THT RYLH SNH K G++ L +RA R+CD E ++ E L F++NGY Sbjct: 1 MGSPISPIIANFFMERFEEKALESSVLK--PAVWFRYVDDTFVVWKHGRDSLDDFLHHLNSQSPSIKFTMETEVNNQLAFLDVLVKRNGDLLDHTVYRKPTHTDRYLHKLSNHHPSQKQGIIGTLANRARRICDNEH-IQEEPSLLNKAFLANGY 152
BLAST of mRNA_H-akashiwo_Contig1004.1.1 vs. uniprot
Match: A0A6J2X6M1_SITOR (uncharacterized protein LOC115875367 n=2 Tax=Sitophilus oryzae TaxID=7048 RepID=A0A6J2X6M1_SITOR) HSP 1 Score: 129 bits (325), Expect = 2.800e-33 Identity = 66/155 (42.58%), Postives = 95/155 (61.29%), Query Frame = 1 Query: 1 IGKSISGPIAGIYLNWFEEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQELLSHVNGQEKRIQFTMEREKNGVLAFLDLKMERVGEKVVTSVYRKDTHTFRYLHWRSNHPKKTKLGVMKCLIHRAHRLCDREEDLRWELGFLKDQFISNGY 465 +G IS IA ++ FEE+ + S K P +W R DD F++W HG + L + L H+N Q I+FTME E+N LAFLD+ ++R G+ + +VYRK THT RYLH SNH K G++ L +RA R+C ++ ++ EL L F++NGY Sbjct: 1 MGSPISPIIANFFMERFEEKALESSVLK--PAVWFRYVDDTFVVWKHGRDSLDDFLHHLNTQSPSIKFTMETEENNQLAFLDVLVKRNGDHLDHTVYRKPTHTDRYLHKLSNHHPSQKHGIIGTLANRARRICAKDH-IQEELSHLNKAFLANGY 152
BLAST of mRNA_H-akashiwo_Contig1004.1.1 vs. uniprot
Match: A0A7S3XWS7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWS7_HETAK) HSP 1 Score: 122 bits (306), Expect = 4.740e-33 Identity = 56/71 (78.87%), Postives = 63/71 (88.73%), Query Frame = 1 Query: 1 IGKSISGPIAGIYLNWFEEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQELLSHVNGQEKRIQFTME 213 IGKSISGPIAGIYLNWF+E+FIYS+RCK+KPTLW RMR IWDHGEEKLQELL HVN QE+R+QFT+E Sbjct: 53 IGKSISGPIAGIYLNWFDEEFIYSERCKNKPTLWKRMRG----IWDHGEEKLQELLGHVNEQEERVQFTIE 119
BLAST of mRNA_H-akashiwo_Contig1004.1.1 vs. uniprot
Match: A0A401QI04_SCYTO (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Scyliorhinus torazame TaxID=75743 RepID=A0A401QI04_SCYTO) HSP 1 Score: 131 bits (330), Expect = 6.570e-33 Identity = 70/156 (44.87%), Postives = 96/156 (61.54%), Query Frame = 1 Query: 1 IGKSISGPIAGIYLNWFEEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQELLSHVNGQEKRIQFTMEREKNGVLAFLDLKMERVGEKVVT-SVYRKDTHTFRYLHWRSNHPKKTKLGVMKCLIHRAHRLCDREEDLRWELGFLKDQFISNGY 465 +G +S A +YL+ FEE+ I S K PT W R DD F+IW HG +KL+E L H+N I+FTME E+NG + FLD+ ++R E ++ +VYRK THT RYLH S+H K K G++ L HR+ + D++ LR EL L+ SNGY Sbjct: 277 MGSPVSPAAANLYLSSFEEEAINSSTLK--PTHWYRYIDDTFVIWPHGRQKLEEFLGHLNSIHPNIKFTMEIEENGQIPFLDVLVKRNAEGTLSHTVYRKTTHTDRYLHAESHHHPKQKRGILHTLAHRSKTISDKQH-LREELQHLQQALASNGY 429
BLAST of mRNA_H-akashiwo_Contig1004.1.1 vs. uniprot
Match: A0A6J2YSK0_SITOR (uncharacterized protein LOC115889824 n=1 Tax=Sitophilus oryzae TaxID=7048 RepID=A0A6J2YSK0_SITOR) HSP 1 Score: 127 bits (320), Expect = 6.730e-33 Identity = 66/155 (42.58%), Postives = 92/155 (59.35%), Query Frame = 1 Query: 1 IGKSISGPIAGIYLNWFEEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQELLSHVNGQEKRIQFTMEREKNGVLAFLDLKMERVGEKVVTSVYRKDTHTFRYLHWRSNHPKKTKLGVMKCLIHRAHRLCDREEDLRWELGFLKDQFISNGY 465 +G IS IA ++ FEE+ + S K P +W R DD F++W HG + L + L H+N Q I+FTME E N LAFLD+ ++R G+ + +VYRK THT RYLH SNH K G++ L +RA +C E ++ EL L F++NGY Sbjct: 58 MGSPISPIIANFFMERFEEKALESSVLK--PAVWFRYVDDTFVVWKHGRDSLDDFLHHLNSQSPSIKFTMETEVNNQLAFLDVLVKRNGDLLDHTVYRKPTHTDRYLHKLSNHHPSQKQGIIGTLANRARHICANEH-IQEELSHLNKAFLANGY 209
BLAST of mRNA_H-akashiwo_Contig1004.1.1 vs. uniprot
Match: UPI000CD7B128 (uncharacterized protein LOC111868932 n=1 Tax=Cryptotermes secundus TaxID=105785 RepID=UPI000CD7B128) HSP 1 Score: 127 bits (320), Expect = 1.330e-32 Identity = 63/156 (40.38%), Postives = 89/156 (57.05%), Query Frame = 1 Query: 1 IGKSISGPIAGIYLNWFEEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQELLSHVNGQEKRIQFTMEREKNGVLAFLDLKMERVGEKVVTSVYRKDTHTFRYLHWRSNHPKKTKLGVMKCLIHRAHRLCDREEDLRWELGFLKDQFISNGYP 468 +G S+S + +Y+ FE+ + D KP+ W R DD F+IW HG LQ L H+N IQFTME E N + FLD+ + + T VYRK THT RYL++ SNHP K G+++ L RA +C + D E+ L+ +F++NGYP Sbjct: 14 MGNSLSPIVCDLYMVHFEKLAL--DSALFKPSCWFRYVDDTFVIWPHGPNTLQNFLIHLNSIRPTIQFTMETEVNNTIPFLDVLVTKTDATFSTKVYRKPTHTGRYLNFESNHPPHIKKGLIRGLQKRAITICQDQNDQHKEISHLRREFLTNGYP 167 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1004.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1004.1.1 >prot_H-akashiwo_Contig1004.1.1 ID=prot_H-akashiwo_Contig1004.1.1|Name=mRNA_H-akashiwo_Contig1004.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=159bp IGKSISGPIAGIYLNWFEEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEback to top mRNA from alignment at H-akashiwo_Contig1004:19084..19560+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1004.1.1 ID=mRNA_H-akashiwo_Contig1004.1.1|Name=mRNA_H-akashiwo_Contig1004.1.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=477bp|location=Sequence derived from alignment at H-akashiwo_Contig1004:19084..19560+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1004:19084..19560+ >mRNA_H-akashiwo_Contig1004.1.1 ID=mRNA_H-akashiwo_Contig1004.1.1|Name=mRNA_H-akashiwo_Contig1004.1.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=477bp|location=Sequence derived from alignment at H-akashiwo_Contig1004:19084..19560+ (Heterosigma akashiwo CCMP452)back to top |