mRNA_H-akashiwo_Contig1000.7.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1000.7.1
Unique NamemRNA_H-akashiwo_Contig1000.7.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig1000.7.1 vs. uniprot
Match: A0A6V1P5X7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P5X7_HETAK)

HSP 1 Score: 497 bits (1280), Expect = 4.700e-168
Identity = 252/429 (58.74%), Postives = 325/429 (75.76%), Query Frame = 1
Query:   13 LKHLKHRKASGIDGVKNDFFIFSAPYILDMLHLLFNKMLHSRYFPEQWNLVMIAPLFKSGDQNDTNNYRDISLLSCLGKLFCTILNQYLSSRIDRARLLSDLQGRFCRRRGCREHSFLLPSSLYSAKRRRRGRVFCAFVDFRKAYDTVRHSILWSRSLSLGMGPKLVELLKSIYTKVKCSVRHGTNLSSFFDYLVGVRQGCVLSPLVFNLFIDELVKTLA*AGGELAGVQVGDLIIFTLLYADDVVLMAEEAAHLQRLLNSLDVFCGVSAMSDNISKTMVVPFF-SKNPLDEFSFVFVNKQLKVVNEYKYLGCYFDREVSFKFHIEAALQRAAKASFAFFSDIENLTNLKTSLIVRLYHTLVLSVLLYNAEVWGLLILKGSLKKLEKFYLACLKRILKVGRGFSTAAVFWLLGVTDISTMIRLKSLKFL 1296
            ++ LK RKA+GID V N+  I+SA +I+  L  LFN++L +RYFP  WN+VMI+PLFKS D NDTNNYR ISLLSCLGKLFC+I+N+++ ++++ A LLSDLQG F R+RGCRE SFLL S+L +A RRR  R  CAFVDFRKAYD+V+HS+LW R  SLG+GPKL ELL+SIY KV+C+VR    LS  F Y +GVRQGC+LSP++FNLFIDELV  +      L+G+++GDL++F LLYADDVVL+A+ AA L  LL SL  FC  S M+ N+ KT VV F  S++P +    +F NK L+VVNEYKYLGC+ D++++F FHI AAL+RA +ASF+ F  I    N+K SL +RLY TLVLSVLL+N EVWG L  K  L+KLEKF+L+CL+RIL VG  F   AVFW+LGV D+ T+I+ +++KFL
Sbjct:   47 IRKLKRRKAAGIDAVYNEILIYSASFIIGALETLFNEVLKTRYFPSTWNVVMISPLFKSDDPNDTNNYRGISLLSCLGKLFCSIINEFVYTQVESAHLLSDLQGGFRRKRGCREQSFLLLSALLTANRRRGRRAHCAFVDFRKAYDSVKHSVLWKRLDSLGLGPKLTELLRSIYDKVRCTVRKDNQLSDLFPYDIGVRQGCILSPIIFNLFIDELVNVIQQNSDSLSGIEIGDLVVFILLYADDVVLVADNAADLSSLLRSLQEFCTASGMNVNVKKTKVVIFGKSRDPTNLPVVLFDNKPLEVVNEYKYLGCFVDKDLNFSFHIGAALKRAERASFSLFRCIGGFRNMKVSLKLRLYKTLVLSVLLFNVEVWGHLARKVDLRKLEKFHLSCLRRILMVGPAFPATAVFWMLGVVDLDTIIKQRTIKFL 475          
BLAST of mRNA_H-akashiwo_Contig1000.7.1 vs. uniprot
Match: A0A7S4DBC8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBC8_HETAK)

HSP 1 Score: 379 bits (972), Expect = 1.370e-125
Identity = 199/214 (92.99%), Postives = 208/214 (97.20%), Query Frame = 1
Query:  655 LVKTLA*AGGELAGVQVGDLIIFTLLYADDVVLMAEEAAHLQRLLNSLDVFCGVSAMSDNISKTMVVPFFSKNPLDEFSFVFVNKQLKVVNEYKYLGCYFDREVSFKFHIEAALQRAAKASFAFFSDIENLTNLKTSLIVRLYHTLVLSVLLYNAEVWGLLILKGSLKKLEKFYLACLKRILKVGRGFSTAAVFWLLGVTDISTMIRLKSLKFL 1296
            +VK LA  GGELAGVQVGDLIIFTLLYADDVVL+A+EAAHLQRLLNSLDVFCGVSAMS NISKTM+VPFFSK+PLDEFSFVFVNKQLKVVNEYKYLGCYFDRE+SFKFHIEAALQRAAKASF+FFSDIENL NLKTSLIVRLYHTLVLSVLLYN EVWGLLILKGSLKKLEKF+L+CLKRILKVGRGFSTAAVFWLLGVTDISTMIRLKSLKFL
Sbjct:    1 MVKILAQGGGELAGVQVGDLIIFTLLYADDVVLIAKEAAHLQRLLNSLDVFCGVSAMSVNISKTMIVPFFSKSPLDEFSFVFVNKQLKVVNEYKYLGCYFDRELSFKFHIEAALQRAAKASFSFFSDIENLPNLKTSLIVRLYHTLVLSVLLYNVEVWGLLILKGSLKKLEKFHLSCLKRILKVGRGFSTAAVFWLLGVTDISTMIRLKSLKFL 214          
BLAST of mRNA_H-akashiwo_Contig1000.7.1 vs. uniprot
Match: A0A4W5NTX3_9TELE (Ribonuclease H n=1 Tax=Hucho hucho TaxID=62062 RepID=A0A4W5NTX3_9TELE)

HSP 1 Score: 225 bits (574), Expect = 1.930e-63
Identity = 143/436 (32.80%), Postives = 242/436 (55.50%), Query Frame = 1
Query:   13 LKHLKHRKASGIDGVKNDFFIFSAPYILDMLHLLFNKMLHSRYFPEQWNLVMIAPLFKSGDQNDTNNYRDISLLSCLGKLFCTILNQYLSSRIDRARLLSDLQGRFCRRRGCREHSFLLPSSLYS-AKRRRRGRVFCAFVDFRKAYDTVRHSILWSRSLSLGMGPKLVELLKSIYTKVKCSVRHGTNLSSFFDYLVGVRQGCVLSPLVFNLFIDELVKTLA*AGGELAGVQVGDLIIFTLLYADDVVLMAEEAAHLQRLLNSLDVFCGVSAMSDNISKTMVVPFFSKNPL---DEFSFVFVNKQLKVVNEYKYLGCYFDREVSFKFHIEAALQRAAKASFAFFSDIENLTNLKTSLIVRLYHTLVLSVLLYNAEVWGLLILKGSLKKLEKFYLACL-----KRILKVGRGFSTAAVFWLLGVTDISTMIRLKSLKF 1293
            LK +K +KA G+D ++N+    S P + + +  LFN +L S  FP+ WN  +I+P+ KSGD++D NNYR I + S LGK+FC+ILN  + + +   +L+S  Q  F       +H + L + +     +++ G++F  F+DF+KA+D++ H  L+ + L  G+G K+ +L+K +YT+ KC+++     + FF    GVRQGC LSP +FN++I+EL   L  +     G+ + D  +  LLYADD+VL++     LQ+ LN L+ +C   A++ N  KT ++  F K P     ++ F   N  ++    Y YLG       +F   + A  ++A +A +A    +  + N+   +  +++ +++L + LY +EVWG L  K   K+ +K  +  L     ++IL+V R   T A    LG   +   I+ +SLKF
Sbjct:  202 LKSIKSKKACGLDNIRNEMLKNSTPELQNAVLKLFNMVLTSGCFPDVWNQGLISPIHKSGDKSDPNNYRGICVNSNLGKVFCSILNSRIQTFLQEKKLISKCQIGFLPNHRTTDHIYTLHTLINKHVHQKKEGKIFACFIDFKKAFDSIWHEGLFYKILQTGLGGKVYDLIKCMYTENKCAIKIKNQRTEFFSQSRGVRQGCSLSPNLFNIYINELADMLDHSPAP--GLTLFDTEVKYLLYADDLVLLSPTKEGLQQNLNILEQYCHNWALAVNFKKTKIM-IFQKKPRCQNHKYKFTLNNTIIEHTKNYTYLGLTISASGNFNMAVNALKEKARRALYAIKMKLFKI-NIPIRIWTKIFDSVILPIALYGSEVWGPLN-KLDFKRWDKHPIEALHAEFCRKILQVQRNTPTNACRAELGRFPVVMKIQKRSLKF 632          
BLAST of mRNA_H-akashiwo_Contig1000.7.1 vs. uniprot
Match: A0A4W5K0Q8_9TELE (Ribonuclease H n=2 Tax=Salmoninae TaxID=504568 RepID=A0A4W5K0Q8_9TELE)

HSP 1 Score: 225 bits (574), Expect = 1.920e-62
Identity = 143/436 (32.80%), Postives = 242/436 (55.50%), Query Frame = 1
Query:   13 LKHLKHRKASGIDGVKNDFFIFSAPYILDMLHLLFNKMLHSRYFPEQWNLVMIAPLFKSGDQNDTNNYRDISLLSCLGKLFCTILNQYLSSRIDRARLLSDLQGRFCRRRGCREHSFLLPSSLYS-AKRRRRGRVFCAFVDFRKAYDTVRHSILWSRSLSLGMGPKLVELLKSIYTKVKCSVRHGTNLSSFFDYLVGVRQGCVLSPLVFNLFIDELVKTLA*AGGELAGVQVGDLIIFTLLYADDVVLMAEEAAHLQRLLNSLDVFCGVSAMSDNISKTMVVPFFSKNPL---DEFSFVFVNKQLKVVNEYKYLGCYFDREVSFKFHIEAALQRAAKASFAFFSDIENLTNLKTSLIVRLYHTLVLSVLLYNAEVWGLLILKGSLKKLEKFYLACL-----KRILKVGRGFSTAAVFWLLGVTDISTMIRLKSLKF 1293
            LK +K +KA G+D ++N+    S P + + +  LFN +L S  FP+ WN  +I+P+ KSGD++D NNYR I + S LGK+FC+ILN  + + +   +L+S  Q  F       +H + L + +     +++ G++F  F+DF+KA+D++ H  L+ + L  G+G K+ +L+K +YT+ KC+++     + FF    GVRQGC LSP +FN++I+EL   L  +     G+ + D  +  LLYADD+VL++     LQ+ LN L+ +C   A++ N  KT ++  F K P     ++ F   N  ++    Y YLG       +F   + A  ++A +A +A    +  + N+   +  +++ +++L + LY +EVWG L  K   K+ +K  +  L     ++IL+V R   T A    LG   +   I+ +SLKF
Sbjct:  302 LKSIKSKKACGLDNIRNEMLKNSTPELQNAVLKLFNMVLTSGCFPDVWNQGLISPIHKSGDKSDPNNYRGICVNSNLGKVFCSILNSRIQTFLQEKKLISKCQIGFLPNHRTTDHIYTLHTLINKHVHQKKEGKIFACFIDFKKAFDSIWHEGLFYKILQTGLGGKVYDLIKCMYTENKCAIKIKNQRTEFFSQSRGVRQGCSLSPNLFNIYINELADMLDHSPAP--GLTLFDTEVKYLLYADDLVLLSPTKEGLQQNLNILEQYCHNWALAVNFKKTKIM-IFQKKPRCQNHKYKFTLNNTIIEHTKNYTYLGLTISASGNFNMAVNALKEKARRALYAIKMKLFKI-NIPIRIWTKIFDSVILPIALYGSEVWGPLN-KLDFKRWDKHPIEALHAEFCRKILQVQRNTPTNACRAELGRFPVVMKIQKRSLKF 732          
BLAST of mRNA_H-akashiwo_Contig1000.7.1 vs. uniprot
Match: A0A8H8XFJ2_9GAMM (Reverse transcriptase domain-containing protein n=3 Tax=Bathymodiolus brooksi thiotrophic gill symbiont TaxID=1052209 RepID=A0A8H8XFJ2_9GAMM)

HSP 1 Score: 225 bits (574), Expect = 3.210e-62
Identity = 148/444 (33.33%), Postives = 241/444 (54.28%), Query Frame = 1
Query:    1 IIRGLKHLKHRKASGIDGVKNDFFIFSAPYILDMLHLLFNKMLHSRYFPEQWNLVMIAPLFKS-GDQNDTNNYRDISLLSCLGKLFCTILNQYLSSRIDRARLLSDLQGRFCRRRGCREHSFLLPSSLYSAKRRRRGRVFCAFVDFRKAYDTVRHSILWSRSLSLGMGPKLVELLKSIYTKVKCSVRHGTNLSSFFDYLVGVRQGCVLSPLVFNLFIDELVKTLA*AGGELAGV-QVGDLI-----------IFTLLYADDVVLMAEEAAHLQRLLNSLDVFCGVSAMSDNISKTMVVPFFSKNPLDEFSFVFVNKQLKVVNEYKYLGCYFDREVSFKFHIEAALQRAAKASFAFFSDIENLTNLKTSLIVRLYHTLVLSVLLYNAEVWGLLILKGSLKKLEKFYLACLKRILKVGRGFSTAAVFWLLGVTDISTMIRLKSLKF 1293
            +   +K LK+ KA G D + N+F   +A  ++ +   +FN +  S   P+ W+   I P+FK+ GD  + +NYR I++LSC GKLF  ILN  L + ++   LL + Q  F +  G  +H F L   L      RR +++CAF+D+RKA+D+V   +LW + L   +   ++ +++++Y   K  VR G+N S FF   +GVRQG  LSPL+F++F+++L + ++ A   L  V  +  L+           ++ LLYADD V+ AE AA LQ  LN++ ++C    +  N +KT VV F      +   F++ N++L VV+E++YLG  F R+ +F  +    +Q+A KA F        L+ L   ++++L+  +V  +LLY AEVWG    K  +   E  +L   K I+KV +      V+  LG   +S  I  + + F
Sbjct:  215 VTDAIKSLKNNKACGGDMILNEFLKHAADKLMPVFVKIFNIIFESGIVPDSWSEGYICPIFKNKGDPANADNYRGITILSCYGKLFTCILNNRLFNYLESLGLLCEEQAGFRKGYGTIDHIFNL-KCLIDLYLFRRKKLYCAFIDYRKAFDSVDRILLWQKLLRTSIDGNMLVIIQNMYKNAKSCVRDGSNCSDFFPSNIGVRQGENLSPLLFSVFLNDLTEFMSHAYNGLNDVCNISHLLFDNDDIEVYFKLYLLLYADDTVIFAETAAELQSALNAMYLYCETWKLKVNTAKTNVVIFSKSRQSENIDFIYNNERLTVVDEFQYLGTIFSRKGNFGRNKARLVQQARKAMFYVLRKARKLS-LPIDILLQLFDVMVAPILLYGAEVWGYE--KNDIS--ETLHLEFCKYIMKVKKCTPNYIVYGELGRVPMSVHINARMIGF 652          
BLAST of mRNA_H-akashiwo_Contig1000.7.1 vs. uniprot
Match: A0A4W5K118_9TELE (Ribonuclease H n=13 Tax=Salmoninae TaxID=504568 RepID=A0A4W5K118_9TELE)

HSP 1 Score: 222 bits (566), Expect = 6.350e-62
Identity = 142/436 (32.57%), Postives = 240/436 (55.05%), Query Frame = 1
Query:   13 LKHLKHRKASGIDGVKNDFFIFSAPYILDMLHLLFNKMLHSRYFPEQWNLVMIAPLFKSGDQNDTNNYRDISLLSCLGKLFCTILNQYLSSRIDRARLLSDLQGRFCRRRGCREHSFLLPSSLYS-AKRRRRGRVFCAFVDFRKAYDTVRHSILWSRSLSLGMGPKLVELLKSIYTKVKCSVRHGTNLSSFFDYLVGVRQGCVLSPLVFNLFIDELVKTLA*AGGELAGVQVGDLIIFTLLYADDVVLMAEEAAHLQRLLNSLDVFCGVSAMSDNISKTMVVPFFSKNPL---DEFSFVFVNKQLKVVNEYKYLGCYFDREVSFKFHIEAALQRAAKASFAFFSDIENLTNLKTSLIVRLYHTLVLSVLLYNAEVWGLLILKGSLKKLEKFYLACL-----KRILKVGRGFSTAAVFWLLGVTDISTMIRLKSLKF 1293
            LK +K +KA G+D ++N+    S P + + +  LFN +L S  FP+ WN  +I+P+ KSGD++D NNYR I + S LGK+FC+ILN  + + +     +S  Q  F       +H + L + +     +++ G++F  F+DF+KA+D++ H  L+ + L  G+G K+ +L+K +YT+ KC+++     + FF    GVRQGC LSP +FN++I+EL   L  +     G+ + D  +  LLYADD+VL++     LQ+ LN L+ +C   A++ N  KT ++  F K P     ++ F   N  ++    Y YLG       +F   + A  ++A +A +A    +  + N+   +  +++ +++L + LY +EVWG L  K   K+ +K  +  L     ++IL+V R   T A    LG   +   I+ +SLKF
Sbjct:   75 LKSIKSKKACGLDNIRNEMLKNSTPELQNAVLKLFNMVLTSGCFPDVWNQGLISPIHKSGDKSDPNNYRGICVNSNLGKVFCSILNSRIQTFLQETFFISKCQIGFLPNHRTTDHIYTLHTLINKHVHQKKEGKIFACFIDFKKAFDSIWHEGLFYKILQTGLGGKVYDLIKCMYTENKCAIKIKNQRTEFFSQSRGVRQGCSLSPNLFNIYINELADMLDHSPAP--GLTLFDTEVKYLLYADDLVLLSPTKEGLQQNLNILEQYCHNWALAVNFKKTKIM-IFQKKPRCQNHKYKFTLNNTIIEHTKNYTYLGLTISASGNFNMAVNALKEKARRALYAIKMKLFKI-NIPIRIWTKIFDSVILPIALYGSEVWGPLN-KLDFKRWDKHPIEALHAEFCRKILQVQRNTPTNACRAELGRFPVVMKIQKRSLKF 505          
BLAST of mRNA_H-akashiwo_Contig1000.7.1 vs. uniprot
Match: A0A6S7JHZ6_PARCT (Reverse transcriptase domain-containing protein n=7 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JHZ6_PARCT)

HSP 1 Score: 225 bits (574), Expect = 2.160e-61
Identity = 141/416 (33.89%), Postives = 222/416 (53.37%), Query Frame = 1
Query:    1 IIRGLKHLKHRKASGIDGVKNDFFIFSAPYILDMLHLLFNKMLHSRYFPEQWNLVMIAPLFKSGDQNDTNNYRDISLLSCLGKLFCTILNQYLSSRIDRARLLSDLQGRFCRRRGCREHSFLLPSSLYS-AKRRRRGRVFCAFVDFRKAYDTVRHSILWSRSLSLGMGPKLVELLKSIYTKVKCSVRHGTNLSSFFDYLVGVRQGCVLSPLVFNLFIDELVKTLA*AGGELAGVQVGDLIIFTLLYADDVVLMAEEAAHLQRLLNSLDVFCGVSAMSDNISKTMVVPFFSKNPLD-EFSFVFVNKQLKVVNEYKYLGCYFDREVSFKFHIEAALQRAAKASFAFFSDIENLTNLKTSLIVRLYHTLVLSVLLYNAEVWGLLILKG----SLKKLEKFYLACLKRILKVGRGFSTAA 1230
            II     LKH+K++  D ++N+   FS   +L   H LFN +L    FPE+W   ++ P+FKSGD+ D NNYR I + SC+GK FC ILN+ L+       L+   Q  F       +H F L + +     + +  +++  FVDF+KA+D+V H  L+S+ L   +G     L+KS+Y+  KC+V+   + ++FF Y  GVRQGC LSPL+FNL+I+EL         +   +  G  +   LLYADD+++++     LQ+ LN L  +C    M  N+ KT V+ F   N    + SF   +  +++V EY YLG   +    F   ++   ++A  A ++    + NL NL   L ++++ T++  +LLYN+EVWG  I          ++EK +L   K  L VG+  +  A
Sbjct:  520 IISAATKLKHKKSAYSDRIRNEMIKFSVNILLKGYHKLFNMILECGIFPEKWCEGLLTPIFKSGDKQDPNNYRGICVTSCIGKFFCLILNKRLNDFTQENNLVHHSQIGFQSGHRTADHVFTLKTLIDKHVTQNKNNKIYACFVDFKKAFDSVWHEGLYSKLLKYKIGGNFYRLIKSLYSNSKCAVKLSKSRTTFFPYSKGVRQGCTLSPLLFNLYINELTTLFNNTDSDPFILPNGSKLN-CLLYADDLIILSRSRFGLQKCLNELQNWCSKWLMEVNLKKTKVMIFQKGNKKKTKPSFTLDSNTIEIVQEYCYLGIKLNSNGKFTLAMKQLGEKALHALYSIRRHL-NLHNLNPKLAIKIFDTIISPILLYNSEVWGAYIKNDFNNWDNSQIEKTHLRFCKLYLGVGKKTTNIA 933          
BLAST of mRNA_H-akashiwo_Contig1000.7.1 vs. uniprot
Match: UPI001E1E0690 (uncharacterized protein LOC123560678 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E0690)

HSP 1 Score: 223 bits (569), Expect = 5.280e-61
Identity = 144/437 (32.95%), Postives = 243/437 (55.61%), Query Frame = 1
Query:    1 IIRGLKHLKHRKASGIDGVKNDFFIFSAPYILDMLHLLFNKMLHSRYFPEQWNLVMIAPLFKSGDQNDTNNYRDISLLSCLGKLFCTILNQYLSSRIDRARLLSDLQGRFCRRRGCREHSFLLPS--SLYSAKRRRRGRVFCAFVDFRKAYDTVRHSILWSRSLSLGMGPKLVELLKSIYTKVKCSVRHGTNLSSFFDYLVGVRQGCVLSPLVFNLFIDELVKTLA*AGGELAGVQVGDLIIFTLLYADDVVLMAEEAAHLQRLLNSLDVFCGVSAMSDNISKTMVVPFFSKNPLD-EFSFVFVNKQLKVVNEYKYLGCYFDREVSFKFHIEAALQRAAKASFAFFSDIENLTN---LKTSLIVRLYHTLVLSVLLYNAEVWGLLILKGSLKKLEKFYLACLKRILKVGRGFSTAAVFWLLGVTDISTMIRLKSLKF 1293
            I +    LK  K+SGID + N++FI +   + D L +LFN +L S  FP+QW   +I PL K     DTNNYR I+L SC GKLF ++LN+ L +       L+D Q  F       +  F+L S  +LY++K +R   ++ AFVD++KAYDT+  + LW + +  G+  K+++LL+S+Y  V+  V+H  +LS FF   +G+ QG + SP++F+ FI++L   L      L+G+ +  + I+ +L+ADD +L+++    LQ  L+ L  +C +  ++ NI+KT +V F  +  L     + +  + +++V ++ YLG       SFK  IE    +A KA     + ++ LT    +  ++ + L+ + V S+L Y+ E+WG     G   KLE+ +   LKR+L V      AAV+   G   +    +++++K+
Sbjct:  371 IRKACSKLKRNKSSGIDCIINEYFIETIDILSDSLEILFNSILESGKFPKQWTQGVIVPLLKKPPATDTNNYRGITLTSCFGKLFTSVLNERLKNWAIENERLTDAQFGFRSGHSTTDAMFILQSLINLYNSKNKR---LYAAFVDYQKAYDTIYRNGLWYKLIREGVDGKMLKLLRSMYEDVQSCVKHMNSLSDFFSCDMGLFQGEITSPILFSFFINDLEMHLQ--SNILSGLNLDQICIYLILFADDCILLSDTPEGLQSHLDLLYDYCRLWKLTVNINKTKIVVFKKRGRLTVNEKWKYAGEDIEIVGQFNYLGFVVSSNGSFKHGIETLAGKALKAM----NSLQMLTRGMEIPVNIRLNLFDSYVSSILCYSCEIWGFT--NGD--KLERLHRKFLKRMLNVKMSTCNAAVYVETGRFPLCVNWKIRTVKY 794          
BLAST of mRNA_H-akashiwo_Contig1000.7.1 vs. uniprot
Match: UPI001E1D4669 (uncharacterized protein LOC123532388 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D4669)

HSP 1 Score: 224 bits (570), Expect = 7.740e-61
Identity = 155/442 (35.07%), Postives = 250/442 (56.56%), Query Frame = 1
Query:   13 LKHLKHRKASGIDGVKNDFFIFSAPYILDMLHL-LFNKMLHSRYFPEQWNLVMIAPLFKS-GDQNDTNNYRDISLLSCLGKLFCTILNQYLSSRIDRARLLSDLQGRFCRRRGCREHSFLLPSSLYSAKRRRRGRVFCAFVDFRKAYDTVRHSILWSRSLSLGMGPKLVELLKSIYTKVKCSVRHGTNLSSFFDYLVGVRQGCVLSPLVFNLFIDEL----VKTLA*AGGELAGVQVGDLI----IFTLLYADDVVLMAEEAAHLQRLLNSLDVFCGVSAMSDNISKTMVVPFFSKNPLDEFSFVFVNKQLKVVNEYKYLGCYFDREVSF---KFHIEAALQRAAKASFAFFSDIENL--TNLKTSLIVRLYHTLVLSVLLYNAEVWGLLILKGSLKKLEKFYLACLKRILKVGRGFSTAAVFWLLGVTDISTMIRLKSLKF 1293
            +K LK+ KASG+D + N+  I S  +I+  ++L LFN + +S   PE W + +I P++K+ GD     NYR I+LLSCLGKLF  ++N  L+  I+   +L + Q  F R++     + L+   L   +   RG++FCAF+D ++A+DTV  + LW + L+L +  K ++L++++Y  +K  VR  +  S FF   VGVRQG  LSPL+F+L++++L    ++    +G  +A  Q G L      F LLYADD V+++E    LQ+ L+    +C    ++ N SK+ ++  FS+      +F+F N+++++VNEYKYLG  F R  SF   K HI      A++A+ A +S I N    +L   L + L++  +  +LLY AE+WG     G+ + +E+  L  LK +LK+ R      V+   G   I+  I  K + F
Sbjct:  733 IKSLKNNKASGVDKIVNEH-IKSTYHIMKGIYLNLFNLVFNSGVIPESWTIGVINPIYKNKGDILKPENYRPITLLSCLGKLFTFVINNRLTKYIEENNVLHNCQAGF-RKKFSTSDNMLILHHLIQYQSTNRGKLFCAFIDLKQAFDTVWRNGLWQKLLNLNINGKCLKLIQNMYQNIKSCVRANSECSQFFTCNVGVRQGENLSPLLFSLYLNDLNDFFLQNNFESGVTIASYQNGALRDFLKSFILLYADDTVILSESETGLQKALDLYAQYCDQWKLTVNTSKSKII-IFSRGRQPNCNFLFKNERMEIVNEYKYLGILFSRNGSFNKCKSHI------ASQATRAMYSLIRNSHRLDLPVDLQIDLFNKTIKPILLYGAEIWG----TGNNEVIERVQLKFLKYVLKLKRSTPGYMVYGETGCMPINIDIEEKIISF 1161          
BLAST of mRNA_H-akashiwo_Contig1000.7.1 vs. uniprot
Match: A0A354GHD9_9FLAO (Reverse transcriptase domain-containing protein n=2 Tax=Tenacibaculum sp. TaxID=1906242 RepID=A0A354GHD9_9FLAO)

HSP 1 Score: 223 bits (567), Expect = 1.870e-60
Identity = 146/421 (34.68%), Postives = 228/421 (54.16%), Query Frame = 1
Query:   13 LKHLKHRKASGIDGVKNDFFIFSAPYILDMLHLLFNKMLHSRYFPEQWNLVMIAPLFKS-GDQNDTNNYRDISLLSCLGKLFCTILNQYLSSRIDRARLLSDLQGRFCRRRGCREHSFLLPSSLYSAKRRRRGRVFCAFVDFRKAYDTVRHSILWSRSLSLGMGPKLVELLKSIYTKVKCSVRHGTNLSSFFDYLVGVRQGCVLSPLVFNLFIDELVKTLA*AGGELAGVQ------VGD------LIIFTLLYADDVVLMAEEAAHLQRLLNSLDVFCGVSAMSDNISKTMVVPFFSKNPLDEFSFVFVNKQLKVVNEYKYLGCYFDREVSFKFHIEAALQRAAKASFAFFSDIENLTNLKTSLIVRLYHTLVLSVLLYNAEVWGLLILKGSLKKLEKFYLACLKRILKVGRGFSTAAVF 1236
            +K LK+ KA G D + N++       + + +  LFN +L S   P  W + MI PLFK+ G  +D NNYR I+LLS LGKLF + LN  LS+ ++    L + Q  F        H F+L   L     +R+ R++CAF+D+ KA+D +  S LW + L+LG+   ++ ++ ++Y+K K  V++G +LS  F+  VGVRQG  LSPL+F +++++    ++     LA V       +GD      L ++ LLYADD +++AE    LQ  LNS+  +C  + +  N++KT ++ F      +   F + N+Q++VV +Y YLG  F+   SF   +E    +A KA F+  +    L  L   + + L+   VL VLLY  EVWG      ++  +E FY   LK ILKVG+      V+
Sbjct:  526 IKKLKNGKACGADNIVNEYLKNCPVAMKNAIVTLFNLVLKSGVVPSDWCIGMIIPLFKNKGSVDDVNNYRGITLLSVLGKLFTSALNSRLSAYLESLSALGEDQAGFREGYSTLNHIFVL-HCLIDFYLQRKKRLYCAFIDYSKAFDLIDRSTLWMKVLNLGIRGNIINVIFNLYSKAKSCVKNGNDLSQLFNCNVGVRQGENLSPLLFAIYLNDFALYVSQEYEGLAFVSEETSRLLGDEAVDMFLRLYILLYADDTIVLAESPLQLQHALNSVKDYCDKNYLKLNLTKTKIIVFSRGKIRNIPKFFYGNEQVEVVKDYVYLGVKFNYNGSFTKAMEKQTDQARKAMFSMLTKARRL-QLPVDIQIELFEKTVLPVLLYGCEVWGC----ANIDAIEVFYRKFLKIILKVGKATPNCIVY 940          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1000.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6V1P5X7_HETAK4.700e-16858.74Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S4DBC8_HETAK1.370e-12592.99Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A4W5NTX3_9TELE1.930e-6332.80Ribonuclease H n=1 Tax=Hucho hucho TaxID=62062 Rep... [more]
A0A4W5K0Q8_9TELE1.920e-6232.80Ribonuclease H n=2 Tax=Salmoninae TaxID=504568 Rep... [more]
A0A8H8XFJ2_9GAMM3.210e-6233.33Reverse transcriptase domain-containing protein n=... [more]
A0A4W5K118_9TELE6.350e-6232.57Ribonuclease H n=13 Tax=Salmoninae TaxID=504568 Re... [more]
A0A6S7JHZ6_PARCT2.160e-6133.89Reverse transcriptase domain-containing protein n=... [more]
UPI001E1E06905.280e-6132.95uncharacterized protein LOC123560678 n=1 Tax=Merce... [more]
UPI001E1D46697.740e-6135.07uncharacterized protein LOC123532388 n=1 Tax=Merce... [more]
A0A354GHD9_9FLAO1.870e-6034.68Reverse transcriptase domain-containing protein n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1000contigH-akashiwo_Contig1000:368908..370203 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog10224.XP_006813392.1
PFAMsRVT_1
Model size1296
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
Exons1
Evalue9.54e-34
EggNOG OGsKOG1075@1|root,KOG1075@2759|Eukaryota,39TZY@33154|Opisthokonta,3BI15@33208|Metazoa,3CYKV@33213|Bilateria
Descriptionprotein phosphatase regulator activity
Cds size576
COG categoryJ
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387047.3158514-UTR-H-akashiwo_Contig1000:368907..3690061681387047.3158514-UTR-H-akashiwo_Contig1000:368907..369006Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig1000 368908..369006 +
1681387047.3378344-UTR-H-akashiwo_Contig1000:369582..3702031681387047.3378344-UTR-H-akashiwo_Contig1000:369582..370203Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig1000 369583..370203 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387047.327512-CDS-H-akashiwo_Contig1000:369006..3695821681387047.327512-CDS-H-akashiwo_Contig1000:369006..369582Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1000 369007..369582 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1000.7.1prot_H-akashiwo_Contig1000.7.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1000 369007..369582 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1000.7.1

>prot_H-akashiwo_Contig1000.7.1 ID=prot_H-akashiwo_Contig1000.7.1|Name=mRNA_H-akashiwo_Contig1000.7.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=192bp
MLHLLFNKMLHSRYFPEQWNLVMIAPLFKSGDQNDTNNYRDISLLSCLGK
LFCTILNQYLSSRIDRARLLSDLQGRFCRRRGCREHSFLLPSSLYSAKRR
RRGRVFCAFVDFRKAYDTVRHSILWSRSLSLGMGPKLVELLKSIYTKVKC
SVRHGTNLSSFFDYLVGVRQGCVLSPLVFNLFIDELVKTLA*
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mRNA from alignment at H-akashiwo_Contig1000:368908..370203+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1000.7.1 ID=mRNA_H-akashiwo_Contig1000.7.1|Name=mRNA_H-akashiwo_Contig1000.7.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1296bp|location=Sequence derived from alignment at H-akashiwo_Contig1000:368908..370203+ (Heterosigma akashiwo CCMP452)
ATTATTAGAGGACTTAAACATCTCAAGCACCGGAAAGCTTCGGGTATAGA CGGTGTAAAGAATGATTTTTTTATTTTTTCGGCTCCGTATATTTTAGATA TGTTGCATCTTCTGTTCAACAAAATGCTTCATTCGCGTTATTTTCCTGAG CAATGGAATCTTGTCATGATTGCACCGTTGTTTAAGAGTGGTGATCAAAA CGATACCAATAATTATCGGGATATATCTTTGTTGTCCTGCCTTGGGAAGC TGTTCTGTACAATCCTCAATCAATATTTGTCTTCTAGAATTGATAGGGCA CGCCTTTTGTCTGACCTTCAGGGCAGATTTTGTAGACGTAGAGGGTGCCG TGAGCATAGTTTCTTGCTTCCATCTTCTCTATATTCTGCAAAGAGGCGTC GTCGGGGCCGTGTGTTTTGTGCCTTTGTCGACTTTAGGAAAGCATACGAC ACAGTTCGCCATTCCATTCTGTGGAGCCGTTCGTTGTCTTTGGGTATGGG CCCTAAATTGGTAGAATTACTCAAAAGCATCTATACCAAGGTCAAGTGCT CAGTTCGGCATGGTACCAACCTCTCTTCGTTCTTTGATTATCTAGTTGGA GTTCGGCAAGGCTGTGTTCTTTCCCCTCTTGTATTTAATTTATTCATTGA TGAGTTGGTCAAAACTCTCGCATAAGCAGGGGGGGAATTGGCCGGTGTGC AGGTAGGGGACCTTATTATCTTTACTCTTTTGTATGCGGACGATGTGGTG CTCATGGCCGAGGAGGCCGCACATCTACAGAGACTACTGAATTCTTTGGA TGTTTTTTGTGGAGTTTCGGCAATGAGTGACAATATTTCTAAAACCATGG TTGTGCCATTCTTTTCCAAAAATCCCCTGGATGAGTTCTCTTTTGTCTTT GTTAACAAGCAGCTGAAAGTTGTCAATGAGTATAAATATTTGGGTTGTTA TTTTGACAGGGAAGTGTCATTCAAATTTCACATTGAAGCAGCCCTGCAGA GAGCTGCAAAGGCTTCTTTTGCATTCTTTTCTGATATTGAGAATCTGACG AACCTCAAGACTTCTCTGATAGTGAGGTTATATCATACTCTTGTCCTTTC TGTTCTTCTTTATAATGCCGAGGTGTGGGGGCTTTTGATTTTAAAAGGAA GTCTTAAAAAGCTTGAAAAGTTCTACCTTGCCTGTCTGAAGAGGATACTG AAAGTTGGGAGAGGTTTCTCGACTGCTGCTGTGTTTTGGCTTTTAGGGGT TACCGACATCTCAACTATGATCCGTTTGAAGTCTTTAAAATTTCTT
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Coding sequence (CDS) from alignment at H-akashiwo_Contig1000:368908..370203+

>mRNA_H-akashiwo_Contig1000.7.1 ID=mRNA_H-akashiwo_Contig1000.7.1|Name=mRNA_H-akashiwo_Contig1000.7.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=576bp|location=Sequence derived from alignment at H-akashiwo_Contig1000:368908..370203+ (Heterosigma akashiwo CCMP452)
ATGTTGCATCTTCTGTTCAACAAAATGCTTCATTCGCGTTATTTTCCTGA
GCAATGGAATCTTGTCATGATTGCACCGTTGTTTAAGAGTGGTGATCAAA
ACGATACCAATAATTATCGGGATATATCTTTGTTGTCCTGCCTTGGGAAG
CTGTTCTGTACAATCCTCAATCAATATTTGTCTTCTAGAATTGATAGGGC
ACGCCTTTTGTCTGACCTTCAGGGCAGATTTTGTAGACGTAGAGGGTGCC
GTGAGCATAGTTTCTTGCTTCCATCTTCTCTATATTCTGCAAAGAGGCGT
CGTCGGGGCCGTGTGTTTTGTGCCTTTGTCGACTTTAGGAAAGCATACGA
CACAGTTCGCCATTCCATTCTGTGGAGCCGTTCGTTGTCTTTGGGTATGG
GCCCTAAATTGGTAGAATTACTCAAAAGCATCTATACCAAGGTCAAGTGC
TCAGTTCGGCATGGTACCAACCTCTCTTCGTTCTTTGATTATCTAGTTGG
AGTTCGGCAAGGCTGTGTTCTTTCCCCTCTTGTATTTAATTTATTCATTG
ATGAGTTGGTCAAAACTCTCGCATAA
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