prot_H-akashiwo_Contig1000.7.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig1000.7.1
Unique Nameprot_H-akashiwo_Contig1000.7.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length192
Homology
BLAST of mRNA_H-akashiwo_Contig1000.7.1 vs. uniprot
Match: A0A6V1P5X7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P5X7_HETAK)

HSP 1 Score: 261 bits (666), Expect = 4.190e-80
Identity = 124/189 (65.61%), Postives = 153/189 (80.95%), Query Frame = 0
Query:    2 LHLLFNKMLHSRYFPEQWNLVMIAPLFKSGDQNDTNNYRDISLLSCLGKLFCTILNQYLSSRIDRARLLSDLQGRFCRRRGCREHSFLLPSSLYSAKRRRRGRVFCAFVDFRKAYDTVRHSILWSRSLSLGMGPKLVELLKSIYTKVKCSVRHGTNLSSFFDYLVGVRQGCVLSPLVFNLFIDELVKTL 190
            L  LFN++L +RYFP  WN+VMI+PLFKS D NDTNNYR ISLLSCLGKLFC+I+N+++ ++++ A LLSDLQG F R+RGCRE SFLL S+L +A RRR  R  CAFVDFRKAYD+V+HS+LW R  SLG+GPKL ELL+SIY KV+C+VR    LS  F Y +GVRQGC+LSP++FNLFIDELV  +
Sbjct:   77 LETLFNEVLKTRYFPSTWNVVMISPLFKSDDPNDTNNYRGISLLSCLGKLFCSIINEFVYTQVESAHLLSDLQGGFRRKRGCREQSFLLLSALLTANRRRGRRAHCAFVDFRKAYDSVKHSVLWKRLDSLGLGPKLTELLRSIYDKVRCTVRKDNQLSDLFPYDIGVRQGCILSPIIFNLFIDELVNVI 265          
BLAST of mRNA_H-akashiwo_Contig1000.7.1 vs. uniprot
Match: A0A4W5R3S7_9TELE (Ribonuclease H n=3 Tax=Hucho hucho TaxID=62062 RepID=A0A4W5R3S7_9TELE)

HSP 1 Score: 147 bits (371), Expect = 4.450e-40
Identity = 73/187 (39.04%), Postives = 118/187 (63.10%), Query Frame = 0
Query:    5 LFNKMLHSRYFPEQWNLVMIAPLFKSGDQNDTNNYRDISLLSCLGKLFCTILNQYLSSRIDRARLLSDLQGRFCRRRGCREHSFLLPSSLYS-AKRRRRGRVFCAFVDFRKAYDTVRHSILWSRSLSLGMGPKLVELLKSIYTKVKCSVRHGTNLSSFFDYLVGVRQGCVLSPLVFNLFIDELVKTL 190
            LFN +L S  FP+ WN  +I+P+ KSGD++D NNYR I + S LGK+FC+ILN  + + +   +L+S  Q  F       +H + L + +     +++ G++F  F+DF+KA+D++ H  L+ + L  G+G K+ +L+K +YT+ KC+++     + FF    GVRQGC LSP +FN++I+EL   L
Sbjct:   16 LFNMVLTSGCFPDVWNQGLISPIHKSGDKSDPNNYRGICVNSNLGKVFCSILNSRIQTFLQEKKLISKCQIGFLPNHRTTDHIYTLHTLINKHVHQKKEGKIFACFIDFKKAFDSIWHEGLFYKILQTGLGGKVYDLIKCMYTENKCAIKIKNQRTEFFSQSRGVRQGCSLSPNLFNIYINELADML 202          
BLAST of mRNA_H-akashiwo_Contig1000.7.1 vs. uniprot
Match: A0A7D9LRA3_PARCT (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9LRA3_PARCT)

HSP 1 Score: 147 bits (371), Expect = 2.410e-39
Identity = 76/185 (41.08%), Postives = 111/185 (60.00%), Query Frame = 0
Query:    3 HLLFNKMLHSRYFPEQWNLVMIAPLFKSGDQNDTNNYRDISLLSCLGKLFCTILNQYLSSRIDRARLLSDLQGRFCRRRGCREHSFLLPSSLYS-AKRRRRGRVFCAFVDFRKAYDTVRHSILWSRSLSLGMGPKLVELLKSIYTKVKCSVRHGTNLSSFFDYLVGVRQGCVLSPLVFNLFIDEL 186
            H LFN +L    FPE+W   ++ P+FKSGD+ D NNYR I + SC+GK FC ILN+ L+       L+   Q  F       +H F L + +       +  +++  FVDF+KA+D+V H  L+S+ L   +G     L+KS+Y+  KC+V+   + ++FF Y  GVRQGC LSPL+FNL+I+EL
Sbjct:  146 HKLFNMILECGIFPEKWCEGLLTPIFKSGDKQDPNNYRGICVTSCIGKFFCLILNKRLNDFTQENDLVHHSQIGFQSGHRTADHVFTLKTLIDKHVTPNKNNKIYACFVDFKKAFDSVWHEGLYSKLLKYKIGGNFYRLIKSLYSNSKCAVKLSKSRTTFFPYSKGVRQGCTLSPLLFNLYINEL 330          
BLAST of mRNA_H-akashiwo_Contig1000.7.1 vs. uniprot
Match: A0A8C1LN31_CYPCA (Reverse transcriptase domain-containing protein n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1LN31_CYPCA)

HSP 1 Score: 147 bits (371), Expect = 2.560e-39
Identity = 72/186 (38.71%), Postives = 117/186 (62.90%), Query Frame = 0
Query:    5 LFNKMLHSRYFPEQWNLVMIAPLFKSGDQNDTNNYRDISLLSCLGKLFCTILNQYLSSRIDRARLLSDLQGRFCRRRGCREHSFLLPSSLYSAKRRRRGRVFCAFVDFRKAYDTVRHSILWSRSLSLGMGPKLVELLKSIYTKVKCSVRHGTNLSSFFDYLVGVRQGCVLSPLVFNLFIDELVKTL 190
            L+NK+L +  FPE W   +I PL+K+ D+ND  NYR ISLL  LGK+F  ILN  L    +   +L + Q  +       ++ F+L S +     +++G+++C F+DF KA+D+V+H++L+   +  G+G K+  +LKS+Y+K+K  V+    L+ +FD  +GVRQGC +SP +F LF++E +  L
Sbjct:  133 LYNKILETGDFPESWCEAVICPLYKNSDKNDVENYRGISLLKVLGKIFTKILNTRLVHYAEMNNILFEEQAGYRSGYSTIDNIFILQSMVQKYITKQKGKMYCIFIDFSKAFDSVQHTLLYFILIKNGIGGKVFNVLKSMYSKLKSCVKGNEGLTEYFDCTIGVRQGCTVSPFLFVLFLNEYITML 318          
BLAST of mRNA_H-akashiwo_Contig1000.7.1 vs. uniprot
Match: A0A4W5Q2H4_9TELE (Ribonuclease H n=1 Tax=Hucho hucho TaxID=62062 RepID=A0A4W5Q2H4_9TELE)

HSP 1 Score: 150 bits (378), Expect = 6.190e-39
Identity = 75/187 (40.11%), Postives = 119/187 (63.64%), Query Frame = 0
Query:    5 LFNKMLHSRYFPEQWNLVMIAPLFKSGDQNDTNNYRDISLLSCLGKLFCTILNQYLSSRIDRARLLSDLQGRFCRRRGCREHSFLLPSSLYS-AKRRRRGRVFCAFVDFRKAYDTVRHSILWSRSLSLGMGPKLVELLKSIYTKVKCSVRHGTNLSSFFDYLVGVRQGCVLSPLVFNLFIDELVKTL 190
            LFN +L S  FP+ WN  +I+P+ KSGD++D NNYR I + S LGK+FC+ILN  + + +   +L+S  Q  F       +H + L + +   A +++ G++F  F+DF+KA+D++ H  L+ R L  G+G K+ +L+K +YT+ KC+++     + FF    GVRQGC LSP +FN++I+EL   L
Sbjct:  335 LFNMVLTSGCFPDVWNQGLISPIHKSGDKSDPNNYRGICVNSNLGKVFCSILNSRIQTFLQEKKLISKCQIGFLPNHRTTDHIYTLHTLINKHAHQKKEGKIFACFIDFKKAFDSIWHEGLFYRILQTGLGGKVYDLIKCMYTENKCAIKIKNQRTEFFSQSRGVRQGCSLSPNLFNIYINELADML 521          
BLAST of mRNA_H-akashiwo_Contig1000.7.1 vs. uniprot
Match: A0A8C7G8N4_ONCKI (Ribonuclease H n=1 Tax=Oncorhynchus kisutch TaxID=8019 RepID=A0A8C7G8N4_ONCKI)

HSP 1 Score: 144 bits (364), Expect = 8.520e-39
Identity = 78/186 (41.94%), Postives = 111/186 (59.68%), Query Frame = 0
Query:    5 LFNKMLHSRYFPEQWNLVMIAPLFKSGDQNDTNNYRDISLLSCLGKLFCTILNQYLSSRIDRARLLSDLQGRFCRRRGCREHSFLLPSSLYSAKRRRRGRVFCAFVDFRKAYDTVRHSILWSRSLSLGMGPKLVELLKSIYTKVKCSVRHGTNLSSFFDYLVGVRQGCVLSPLVFNLFIDELVKTL 190
            LFN +L S  FP  WN  +I P+ KSGD+ D NNY  I + S LGK+ C I+N  L   +    +LS  Q  F       +H ++L + +     R +G+VF  FVDF+KA+D++ H  L  + +  G+G K  E++KSIYT  KC+V+ G N + FF    GVRQGC LSP +FN++I+EL + L
Sbjct:   16 LFNIILSSSIFPNIWNQGLITPIHKSGDKFDPNNYCGICVNSNLGKILCFIINSRLVHFLSENIVLSKCQIGFLPNDRMTDHVYILHTIIDKQINRNKGKVFSCFVDFKKAFDSIWHESLLYKLMESGVGGKTYEIIKSIYTNNKCAVQIGKNHTHFFPQGHGVRQGCSLSPTLFNIYINELARAL 201          
BLAST of mRNA_H-akashiwo_Contig1000.7.1 vs. uniprot
Match: A0A4W5L192_9TELE (Ribonuclease H n=1 Tax=Hucho hucho TaxID=62062 RepID=A0A4W5L192_9TELE)

HSP 1 Score: 147 bits (371), Expect = 1.370e-38
Identity = 73/187 (39.04%), Postives = 118/187 (63.10%), Query Frame = 0
Query:    5 LFNKMLHSRYFPEQWNLVMIAPLFKSGDQNDTNNYRDISLLSCLGKLFCTILNQYLSSRIDRARLLSDLQGRFCRRRGCREHSFLLPSSLYS-AKRRRRGRVFCAFVDFRKAYDTVRHSILWSRSLSLGMGPKLVELLKSIYTKVKCSVRHGTNLSSFFDYLVGVRQGCVLSPLVFNLFIDELVKTL 190
            LFN +L S  FP+ WN  +I+P+ KSGD++D NNYR I + S LGK+FC+ILN  + + +   +L+S  Q  F       +H + L + +     +++ G++F  F+DF+KA+D++ H  L+ + L  G+G K+ +L+K +YT+ KC+++     + FF    GVRQGC LSP +FN++I+EL   L
Sbjct:   16 LFNMVLTSGCFPDVWNQGLISPIHKSGDKSDPNNYRGICVNSNLGKVFCSILNSRIQTFLQEKKLISKCQIGFLPNHRTTDHIYTLHTLINKHVHQKKEGKIFACFIDFKKAFDSIWHEGLFYKILQTGLGGKVYDLIKCMYTENKCAIKIKNQRTEFFSQSRGVRQGCSLSPNLFNIYINELADML 202          
BLAST of mRNA_H-akashiwo_Contig1000.7.1 vs. uniprot
Match: A0A6S7JHZ6_PARCT (Reverse transcriptase domain-containing protein n=7 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JHZ6_PARCT)

HSP 1 Score: 149 bits (376), Expect = 3.590e-38
Identity = 76/185 (41.08%), Postives = 112/185 (60.54%), Query Frame = 0
Query:    3 HLLFNKMLHSRYFPEQWNLVMIAPLFKSGDQNDTNNYRDISLLSCLGKLFCTILNQYLSSRIDRARLLSDLQGRFCRRRGCREHSFLLPSSLYS-AKRRRRGRVFCAFVDFRKAYDTVRHSILWSRSLSLGMGPKLVELLKSIYTKVKCSVRHGTNLSSFFDYLVGVRQGCVLSPLVFNLFIDEL 186
            H LFN +L    FPE+W   ++ P+FKSGD+ D NNYR I + SC+GK FC ILN+ L+       L+   Q  F       +H F L + +     + +  +++  FVDF+KA+D+V H  L+S+ L   +G     L+KS+Y+  KC+V+   + ++FF Y  GVRQGC LSPL+FNL+I+EL
Sbjct:  555 HKLFNMILECGIFPEKWCEGLLTPIFKSGDKQDPNNYRGICVTSCIGKFFCLILNKRLNDFTQENNLVHHSQIGFQSGHRTADHVFTLKTLIDKHVTQNKNNKIYACFVDFKKAFDSVWHEGLYSKLLKYKIGGNFYRLIKSLYSNSKCAVKLSKSRTTFFPYSKGVRQGCTLSPLLFNLYINEL 739          
BLAST of mRNA_H-akashiwo_Contig1000.7.1 vs. uniprot
Match: A0A8C1FML7_CYPCA (Ribonuclease H n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1FML7_CYPCA)

HSP 1 Score: 149 bits (375), Expect = 4.660e-38
Identity = 73/186 (39.25%), Postives = 118/186 (63.44%), Query Frame = 0
Query:    5 LFNKMLHSRYFPEQWNLVMIAPLFKSGDQNDTNNYRDISLLSCLGKLFCTILNQYLSSRIDRARLLSDLQGRFCRRRGCREHSFLLPSSLYSAKRRRRGRVFCAFVDFRKAYDTVRHSILWSRSLSLGMGPKLVELLKSIYTKVKCSVRHGTNLSSFFDYLVGVRQGCVLSPLVFNLFIDELVKTL 190
            L+NK+L +  FPE W   +I PL+K+GD+ND  NYR ISLL+ LGK+F  ILN  L    +    L + Q  +       ++ F+L S +     +++G+++C F+DF KA+D+V+H++L+   +  G+G K+  +LKS+Y+K+K  V+    L+ +FD  +GVRQGC +SP +F LF++E +  L
Sbjct:  330 LYNKILETGDFPESWCEAVICPLYKNGDKNDVENYRGISLLNVLGKIFTKILNTRLVHYAEMNNTLFEEQAGYRSGYSTIDNIFILQSMVQKYITKQKGKMYCIFIDFSKAFDSVQHTLLYFILIKNGIGGKVFNVLKSMYSKLKSCVKGNEGLTEYFDCTIGVRQGCTVSPFLFVLFLNEYITML 515          
BLAST of mRNA_H-akashiwo_Contig1000.7.1 vs. uniprot
Match: A0A4W5NTX3_9TELE (Ribonuclease H n=1 Tax=Hucho hucho TaxID=62062 RepID=A0A4W5NTX3_9TELE)

HSP 1 Score: 147 bits (371), Expect = 8.250e-38
Identity = 73/187 (39.04%), Postives = 118/187 (63.10%), Query Frame = 0
Query:    5 LFNKMLHSRYFPEQWNLVMIAPLFKSGDQNDTNNYRDISLLSCLGKLFCTILNQYLSSRIDRARLLSDLQGRFCRRRGCREHSFLLPSSLYS-AKRRRRGRVFCAFVDFRKAYDTVRHSILWSRSLSLGMGPKLVELLKSIYTKVKCSVRHGTNLSSFFDYLVGVRQGCVLSPLVFNLFIDELVKTL 190
            LFN +L S  FP+ WN  +I+P+ KSGD++D NNYR I + S LGK+FC+ILN  + + +   +L+S  Q  F       +H + L + +     +++ G++F  F+DF+KA+D++ H  L+ + L  G+G K+ +L+K +YT+ KC+++     + FF    GVRQGC LSP +FN++I+EL   L
Sbjct:  235 LFNMVLTSGCFPDVWNQGLISPIHKSGDKSDPNNYRGICVNSNLGKVFCSILNSRIQTFLQEKKLISKCQIGFLPNHRTTDHIYTLHTLINKHVHQKKEGKIFACFIDFKKAFDSIWHEGLFYKILQTGLGGKVYDLIKCMYTENKCAIKIKNQRTEFFSQSRGVRQGCSLSPNLFNIYINELADML 421          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1000.7.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6V1P5X7_HETAK4.190e-8065.61Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A4W5R3S7_9TELE4.450e-4039.04Ribonuclease H n=3 Tax=Hucho hucho TaxID=62062 Rep... [more]
A0A7D9LRA3_PARCT2.410e-3941.08Reverse transcriptase domain-containing protein (F... [more]
A0A8C1LN31_CYPCA2.560e-3938.71Reverse transcriptase domain-containing protein n=... [more]
A0A4W5Q2H4_9TELE6.190e-3940.11Ribonuclease H n=1 Tax=Hucho hucho TaxID=62062 Rep... [more]
A0A8C7G8N4_ONCKI8.520e-3941.94Ribonuclease H n=1 Tax=Oncorhynchus kisutch TaxID=... [more]
A0A4W5L192_9TELE1.370e-3839.04Ribonuclease H n=1 Tax=Hucho hucho TaxID=62062 Rep... [more]
A0A6S7JHZ6_PARCT3.590e-3841.08Reverse transcriptase domain-containing protein n=... [more]
A0A8C1FML7_CYPCA4.660e-3839.25Ribonuclease H n=1 Tax=Cyprinus carpio TaxID=7962 ... [more]
A0A4W5NTX3_9TELE8.250e-3839.04Ribonuclease H n=1 Tax=Hucho hucho TaxID=62062 Rep... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 36..190
e-value: 5.6E-23
score: 81.6
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 8..191
score: 10.064559
NoneNo IPR availablePANTHERPTHR47027:SF11SUBFAMILY NOT NAMEDcoord: 14..188
NoneNo IPR availablePANTHERPTHR47027FAMILY NOT NAMEDcoord: 14..188
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 7..189

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1000contigH-akashiwo_Contig1000:369007..369582 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1000.7.1mRNA_H-akashiwo_Contig1000.7.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig1000 368908..370203 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig1000.7.1 ID=prot_H-akashiwo_Contig1000.7.1|Name=mRNA_H-akashiwo_Contig1000.7.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=192bp
MLHLLFNKMLHSRYFPEQWNLVMIAPLFKSGDQNDTNNYRDISLLSCLGK
LFCTILNQYLSSRIDRARLLSDLQGRFCRRRGCREHSFLLPSSLYSAKRR
RRGRVFCAFVDFRKAYDTVRHSILWSRSLSLGMGPKLVELLKSIYTKVKC
SVRHGTNLSSFFDYLVGVRQGCVLSPLVFNLFIDELVKTLA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
IPR043502DNA/RNA_pol_sf