mRNA_H-akashiwo_Contig1000.7.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1000.7.1 vs. uniprot
Match: A0A6V1P5X7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P5X7_HETAK) HSP 1 Score: 497 bits (1280), Expect = 4.700e-168 Identity = 252/429 (58.74%), Postives = 325/429 (75.76%), Query Frame = 1 Query: 13 LKHLKHRKASGIDGVKNDFFIFSAPYILDMLHLLFNKMLHSRYFPEQWNLVMIAPLFKSGDQNDTNNYRDISLLSCLGKLFCTILNQYLSSRIDRARLLSDLQGRFCRRRGCREHSFLLPSSLYSAKRRRRGRVFCAFVDFRKAYDTVRHSILWSRSLSLGMGPKLVELLKSIYTKVKCSVRHGTNLSSFFDYLVGVRQGCVLSPLVFNLFIDELVKTLA*AGGELAGVQVGDLIIFTLLYADDVVLMAEEAAHLQRLLNSLDVFCGVSAMSDNISKTMVVPFF-SKNPLDEFSFVFVNKQLKVVNEYKYLGCYFDREVSFKFHIEAALQRAAKASFAFFSDIENLTNLKTSLIVRLYHTLVLSVLLYNAEVWGLLILKGSLKKLEKFYLACLKRILKVGRGFSTAAVFWLLGVTDISTMIRLKSLKFL 1296 ++ LK RKA+GID V N+ I+SA +I+ L LFN++L +RYFP WN+VMI+PLFKS D NDTNNYR ISLLSCLGKLFC+I+N+++ ++++ A LLSDLQG F R+RGCRE SFLL S+L +A RRR R CAFVDFRKAYD+V+HS+LW R SLG+GPKL ELL+SIY KV+C+VR LS F Y +GVRQGC+LSP++FNLFIDELV + L+G+++GDL++F LLYADDVVL+A+ AA L LL SL FC S M+ N+ KT VV F S++P + +F NK L+VVNEYKYLGC+ D++++F FHI AAL+RA +ASF+ F I N+K SL +RLY TLVLSVLL+N EVWG L K L+KLEKF+L+CL+RIL VG F AVFW+LGV D+ T+I+ +++KFL Sbjct: 47 IRKLKRRKAAGIDAVYNEILIYSASFIIGALETLFNEVLKTRYFPSTWNVVMISPLFKSDDPNDTNNYRGISLLSCLGKLFCSIINEFVYTQVESAHLLSDLQGGFRRKRGCREQSFLLLSALLTANRRRGRRAHCAFVDFRKAYDSVKHSVLWKRLDSLGLGPKLTELLRSIYDKVRCTVRKDNQLSDLFPYDIGVRQGCILSPIIFNLFIDELVNVIQQNSDSLSGIEIGDLVVFILLYADDVVLVADNAADLSSLLRSLQEFCTASGMNVNVKKTKVVIFGKSRDPTNLPVVLFDNKPLEVVNEYKYLGCFVDKDLNFSFHIGAALKRAERASFSLFRCIGGFRNMKVSLKLRLYKTLVLSVLLFNVEVWGHLARKVDLRKLEKFHLSCLRRILMVGPAFPATAVFWMLGVVDLDTIIKQRTIKFL 475
BLAST of mRNA_H-akashiwo_Contig1000.7.1 vs. uniprot
Match: A0A7S4DBC8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBC8_HETAK) HSP 1 Score: 379 bits (972), Expect = 1.370e-125 Identity = 199/214 (92.99%), Postives = 208/214 (97.20%), Query Frame = 1 Query: 655 LVKTLA*AGGELAGVQVGDLIIFTLLYADDVVLMAEEAAHLQRLLNSLDVFCGVSAMSDNISKTMVVPFFSKNPLDEFSFVFVNKQLKVVNEYKYLGCYFDREVSFKFHIEAALQRAAKASFAFFSDIENLTNLKTSLIVRLYHTLVLSVLLYNAEVWGLLILKGSLKKLEKFYLACLKRILKVGRGFSTAAVFWLLGVTDISTMIRLKSLKFL 1296 +VK LA GGELAGVQVGDLIIFTLLYADDVVL+A+EAAHLQRLLNSLDVFCGVSAMS NISKTM+VPFFSK+PLDEFSFVFVNKQLKVVNEYKYLGCYFDRE+SFKFHIEAALQRAAKASF+FFSDIENL NLKTSLIVRLYHTLVLSVLLYN EVWGLLILKGSLKKLEKF+L+CLKRILKVGRGFSTAAVFWLLGVTDISTMIRLKSLKFL Sbjct: 1 MVKILAQGGGELAGVQVGDLIIFTLLYADDVVLIAKEAAHLQRLLNSLDVFCGVSAMSVNISKTMIVPFFSKSPLDEFSFVFVNKQLKVVNEYKYLGCYFDRELSFKFHIEAALQRAAKASFSFFSDIENLPNLKTSLIVRLYHTLVLSVLLYNVEVWGLLILKGSLKKLEKFHLSCLKRILKVGRGFSTAAVFWLLGVTDISTMIRLKSLKFL 214
BLAST of mRNA_H-akashiwo_Contig1000.7.1 vs. uniprot
Match: A0A4W5NTX3_9TELE (Ribonuclease H n=1 Tax=Hucho hucho TaxID=62062 RepID=A0A4W5NTX3_9TELE) HSP 1 Score: 225 bits (574), Expect = 1.930e-63 Identity = 143/436 (32.80%), Postives = 242/436 (55.50%), Query Frame = 1 Query: 13 LKHLKHRKASGIDGVKNDFFIFSAPYILDMLHLLFNKMLHSRYFPEQWNLVMIAPLFKSGDQNDTNNYRDISLLSCLGKLFCTILNQYLSSRIDRARLLSDLQGRFCRRRGCREHSFLLPSSLYS-AKRRRRGRVFCAFVDFRKAYDTVRHSILWSRSLSLGMGPKLVELLKSIYTKVKCSVRHGTNLSSFFDYLVGVRQGCVLSPLVFNLFIDELVKTLA*AGGELAGVQVGDLIIFTLLYADDVVLMAEEAAHLQRLLNSLDVFCGVSAMSDNISKTMVVPFFSKNPL---DEFSFVFVNKQLKVVNEYKYLGCYFDREVSFKFHIEAALQRAAKASFAFFSDIENLTNLKTSLIVRLYHTLVLSVLLYNAEVWGLLILKGSLKKLEKFYLACL-----KRILKVGRGFSTAAVFWLLGVTDISTMIRLKSLKF 1293 LK +K +KA G+D ++N+ S P + + + LFN +L S FP+ WN +I+P+ KSGD++D NNYR I + S LGK+FC+ILN + + + +L+S Q F +H + L + + +++ G++F F+DF+KA+D++ H L+ + L G+G K+ +L+K +YT+ KC+++ + FF GVRQGC LSP +FN++I+EL L + G+ + D + LLYADD+VL++ LQ+ LN L+ +C A++ N KT ++ F K P ++ F N ++ Y YLG +F + A ++A +A +A + + N+ + +++ +++L + LY +EVWG L K K+ +K + L ++IL+V R T A LG + I+ +SLKF Sbjct: 202 LKSIKSKKACGLDNIRNEMLKNSTPELQNAVLKLFNMVLTSGCFPDVWNQGLISPIHKSGDKSDPNNYRGICVNSNLGKVFCSILNSRIQTFLQEKKLISKCQIGFLPNHRTTDHIYTLHTLINKHVHQKKEGKIFACFIDFKKAFDSIWHEGLFYKILQTGLGGKVYDLIKCMYTENKCAIKIKNQRTEFFSQSRGVRQGCSLSPNLFNIYINELADMLDHSPAP--GLTLFDTEVKYLLYADDLVLLSPTKEGLQQNLNILEQYCHNWALAVNFKKTKIM-IFQKKPRCQNHKYKFTLNNTIIEHTKNYTYLGLTISASGNFNMAVNALKEKARRALYAIKMKLFKI-NIPIRIWTKIFDSVILPIALYGSEVWGPLN-KLDFKRWDKHPIEALHAEFCRKILQVQRNTPTNACRAELGRFPVVMKIQKRSLKF 632
BLAST of mRNA_H-akashiwo_Contig1000.7.1 vs. uniprot
Match: A0A4W5K0Q8_9TELE (Ribonuclease H n=2 Tax=Salmoninae TaxID=504568 RepID=A0A4W5K0Q8_9TELE) HSP 1 Score: 225 bits (574), Expect = 1.920e-62 Identity = 143/436 (32.80%), Postives = 242/436 (55.50%), Query Frame = 1 Query: 13 LKHLKHRKASGIDGVKNDFFIFSAPYILDMLHLLFNKMLHSRYFPEQWNLVMIAPLFKSGDQNDTNNYRDISLLSCLGKLFCTILNQYLSSRIDRARLLSDLQGRFCRRRGCREHSFLLPSSLYS-AKRRRRGRVFCAFVDFRKAYDTVRHSILWSRSLSLGMGPKLVELLKSIYTKVKCSVRHGTNLSSFFDYLVGVRQGCVLSPLVFNLFIDELVKTLA*AGGELAGVQVGDLIIFTLLYADDVVLMAEEAAHLQRLLNSLDVFCGVSAMSDNISKTMVVPFFSKNPL---DEFSFVFVNKQLKVVNEYKYLGCYFDREVSFKFHIEAALQRAAKASFAFFSDIENLTNLKTSLIVRLYHTLVLSVLLYNAEVWGLLILKGSLKKLEKFYLACL-----KRILKVGRGFSTAAVFWLLGVTDISTMIRLKSLKF 1293 LK +K +KA G+D ++N+ S P + + + LFN +L S FP+ WN +I+P+ KSGD++D NNYR I + S LGK+FC+ILN + + + +L+S Q F +H + L + + +++ G++F F+DF+KA+D++ H L+ + L G+G K+ +L+K +YT+ KC+++ + FF GVRQGC LSP +FN++I+EL L + G+ + D + LLYADD+VL++ LQ+ LN L+ +C A++ N KT ++ F K P ++ F N ++ Y YLG +F + A ++A +A +A + + N+ + +++ +++L + LY +EVWG L K K+ +K + L ++IL+V R T A LG + I+ +SLKF Sbjct: 302 LKSIKSKKACGLDNIRNEMLKNSTPELQNAVLKLFNMVLTSGCFPDVWNQGLISPIHKSGDKSDPNNYRGICVNSNLGKVFCSILNSRIQTFLQEKKLISKCQIGFLPNHRTTDHIYTLHTLINKHVHQKKEGKIFACFIDFKKAFDSIWHEGLFYKILQTGLGGKVYDLIKCMYTENKCAIKIKNQRTEFFSQSRGVRQGCSLSPNLFNIYINELADMLDHSPAP--GLTLFDTEVKYLLYADDLVLLSPTKEGLQQNLNILEQYCHNWALAVNFKKTKIM-IFQKKPRCQNHKYKFTLNNTIIEHTKNYTYLGLTISASGNFNMAVNALKEKARRALYAIKMKLFKI-NIPIRIWTKIFDSVILPIALYGSEVWGPLN-KLDFKRWDKHPIEALHAEFCRKILQVQRNTPTNACRAELGRFPVVMKIQKRSLKF 732
BLAST of mRNA_H-akashiwo_Contig1000.7.1 vs. uniprot
Match: A0A8H8XFJ2_9GAMM (Reverse transcriptase domain-containing protein n=3 Tax=Bathymodiolus brooksi thiotrophic gill symbiont TaxID=1052209 RepID=A0A8H8XFJ2_9GAMM) HSP 1 Score: 225 bits (574), Expect = 3.210e-62 Identity = 148/444 (33.33%), Postives = 241/444 (54.28%), Query Frame = 1 Query: 1 IIRGLKHLKHRKASGIDGVKNDFFIFSAPYILDMLHLLFNKMLHSRYFPEQWNLVMIAPLFKS-GDQNDTNNYRDISLLSCLGKLFCTILNQYLSSRIDRARLLSDLQGRFCRRRGCREHSFLLPSSLYSAKRRRRGRVFCAFVDFRKAYDTVRHSILWSRSLSLGMGPKLVELLKSIYTKVKCSVRHGTNLSSFFDYLVGVRQGCVLSPLVFNLFIDELVKTLA*AGGELAGV-QVGDLI-----------IFTLLYADDVVLMAEEAAHLQRLLNSLDVFCGVSAMSDNISKTMVVPFFSKNPLDEFSFVFVNKQLKVVNEYKYLGCYFDREVSFKFHIEAALQRAAKASFAFFSDIENLTNLKTSLIVRLYHTLVLSVLLYNAEVWGLLILKGSLKKLEKFYLACLKRILKVGRGFSTAAVFWLLGVTDISTMIRLKSLKF 1293 + +K LK+ KA G D + N+F +A ++ + +FN + S P+ W+ I P+FK+ GD + +NYR I++LSC GKLF ILN L + ++ LL + Q F + G +H F L L RR +++CAF+D+RKA+D+V +LW + L + ++ +++++Y K VR G+N S FF +GVRQG LSPL+F++F+++L + ++ A L V + L+ ++ LLYADD V+ AE AA LQ LN++ ++C + N +KT VV F + F++ N++L VV+E++YLG F R+ +F + +Q+A KA F L+ L ++++L+ +V +LLY AEVWG K + E +L K I+KV + V+ LG +S I + + F Sbjct: 215 VTDAIKSLKNNKACGGDMILNEFLKHAADKLMPVFVKIFNIIFESGIVPDSWSEGYICPIFKNKGDPANADNYRGITILSCYGKLFTCILNNRLFNYLESLGLLCEEQAGFRKGYGTIDHIFNL-KCLIDLYLFRRKKLYCAFIDYRKAFDSVDRILLWQKLLRTSIDGNMLVIIQNMYKNAKSCVRDGSNCSDFFPSNIGVRQGENLSPLLFSVFLNDLTEFMSHAYNGLNDVCNISHLLFDNDDIEVYFKLYLLLYADDTVIFAETAAELQSALNAMYLYCETWKLKVNTAKTNVVIFSKSRQSENIDFIYNNERLTVVDEFQYLGTIFSRKGNFGRNKARLVQQARKAMFYVLRKARKLS-LPIDILLQLFDVMVAPILLYGAEVWGYE--KNDIS--ETLHLEFCKYIMKVKKCTPNYIVYGELGRVPMSVHINARMIGF 652
BLAST of mRNA_H-akashiwo_Contig1000.7.1 vs. uniprot
Match: A0A4W5K118_9TELE (Ribonuclease H n=13 Tax=Salmoninae TaxID=504568 RepID=A0A4W5K118_9TELE) HSP 1 Score: 222 bits (566), Expect = 6.350e-62 Identity = 142/436 (32.57%), Postives = 240/436 (55.05%), Query Frame = 1 Query: 13 LKHLKHRKASGIDGVKNDFFIFSAPYILDMLHLLFNKMLHSRYFPEQWNLVMIAPLFKSGDQNDTNNYRDISLLSCLGKLFCTILNQYLSSRIDRARLLSDLQGRFCRRRGCREHSFLLPSSLYS-AKRRRRGRVFCAFVDFRKAYDTVRHSILWSRSLSLGMGPKLVELLKSIYTKVKCSVRHGTNLSSFFDYLVGVRQGCVLSPLVFNLFIDELVKTLA*AGGELAGVQVGDLIIFTLLYADDVVLMAEEAAHLQRLLNSLDVFCGVSAMSDNISKTMVVPFFSKNPL---DEFSFVFVNKQLKVVNEYKYLGCYFDREVSFKFHIEAALQRAAKASFAFFSDIENLTNLKTSLIVRLYHTLVLSVLLYNAEVWGLLILKGSLKKLEKFYLACL-----KRILKVGRGFSTAAVFWLLGVTDISTMIRLKSLKF 1293 LK +K +KA G+D ++N+ S P + + + LFN +L S FP+ WN +I+P+ KSGD++D NNYR I + S LGK+FC+ILN + + + +S Q F +H + L + + +++ G++F F+DF+KA+D++ H L+ + L G+G K+ +L+K +YT+ KC+++ + FF GVRQGC LSP +FN++I+EL L + G+ + D + LLYADD+VL++ LQ+ LN L+ +C A++ N KT ++ F K P ++ F N ++ Y YLG +F + A ++A +A +A + + N+ + +++ +++L + LY +EVWG L K K+ +K + L ++IL+V R T A LG + I+ +SLKF Sbjct: 75 LKSIKSKKACGLDNIRNEMLKNSTPELQNAVLKLFNMVLTSGCFPDVWNQGLISPIHKSGDKSDPNNYRGICVNSNLGKVFCSILNSRIQTFLQETFFISKCQIGFLPNHRTTDHIYTLHTLINKHVHQKKEGKIFACFIDFKKAFDSIWHEGLFYKILQTGLGGKVYDLIKCMYTENKCAIKIKNQRTEFFSQSRGVRQGCSLSPNLFNIYINELADMLDHSPAP--GLTLFDTEVKYLLYADDLVLLSPTKEGLQQNLNILEQYCHNWALAVNFKKTKIM-IFQKKPRCQNHKYKFTLNNTIIEHTKNYTYLGLTISASGNFNMAVNALKEKARRALYAIKMKLFKI-NIPIRIWTKIFDSVILPIALYGSEVWGPLN-KLDFKRWDKHPIEALHAEFCRKILQVQRNTPTNACRAELGRFPVVMKIQKRSLKF 505
BLAST of mRNA_H-akashiwo_Contig1000.7.1 vs. uniprot
Match: A0A6S7JHZ6_PARCT (Reverse transcriptase domain-containing protein n=7 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JHZ6_PARCT) HSP 1 Score: 225 bits (574), Expect = 2.160e-61 Identity = 141/416 (33.89%), Postives = 222/416 (53.37%), Query Frame = 1 Query: 1 IIRGLKHLKHRKASGIDGVKNDFFIFSAPYILDMLHLLFNKMLHSRYFPEQWNLVMIAPLFKSGDQNDTNNYRDISLLSCLGKLFCTILNQYLSSRIDRARLLSDLQGRFCRRRGCREHSFLLPSSLYS-AKRRRRGRVFCAFVDFRKAYDTVRHSILWSRSLSLGMGPKLVELLKSIYTKVKCSVRHGTNLSSFFDYLVGVRQGCVLSPLVFNLFIDELVKTLA*AGGELAGVQVGDLIIFTLLYADDVVLMAEEAAHLQRLLNSLDVFCGVSAMSDNISKTMVVPFFSKNPLD-EFSFVFVNKQLKVVNEYKYLGCYFDREVSFKFHIEAALQRAAKASFAFFSDIENLTNLKTSLIVRLYHTLVLSVLLYNAEVWGLLILKG----SLKKLEKFYLACLKRILKVGRGFSTAA 1230 II LKH+K++ D ++N+ FS +L H LFN +L FPE+W ++ P+FKSGD+ D NNYR I + SC+GK FC ILN+ L+ L+ Q F +H F L + + + + +++ FVDF+KA+D+V H L+S+ L +G L+KS+Y+ KC+V+ + ++FF Y GVRQGC LSPL+FNL+I+EL + + G + LLYADD+++++ LQ+ LN L +C M N+ KT V+ F N + SF + +++V EY YLG + F ++ ++A A ++ + NL NL L ++++ T++ +LLYN+EVWG I ++EK +L K L VG+ + A Sbjct: 520 IISAATKLKHKKSAYSDRIRNEMIKFSVNILLKGYHKLFNMILECGIFPEKWCEGLLTPIFKSGDKQDPNNYRGICVTSCIGKFFCLILNKRLNDFTQENNLVHHSQIGFQSGHRTADHVFTLKTLIDKHVTQNKNNKIYACFVDFKKAFDSVWHEGLYSKLLKYKIGGNFYRLIKSLYSNSKCAVKLSKSRTTFFPYSKGVRQGCTLSPLLFNLYINELTTLFNNTDSDPFILPNGSKLN-CLLYADDLIILSRSRFGLQKCLNELQNWCSKWLMEVNLKKTKVMIFQKGNKKKTKPSFTLDSNTIEIVQEYCYLGIKLNSNGKFTLAMKQLGEKALHALYSIRRHL-NLHNLNPKLAIKIFDTIISPILLYNSEVWGAYIKNDFNNWDNSQIEKTHLRFCKLYLGVGKKTTNIA 933
BLAST of mRNA_H-akashiwo_Contig1000.7.1 vs. uniprot
Match: UPI001E1E0690 (uncharacterized protein LOC123560678 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E0690) HSP 1 Score: 223 bits (569), Expect = 5.280e-61 Identity = 144/437 (32.95%), Postives = 243/437 (55.61%), Query Frame = 1 Query: 1 IIRGLKHLKHRKASGIDGVKNDFFIFSAPYILDMLHLLFNKMLHSRYFPEQWNLVMIAPLFKSGDQNDTNNYRDISLLSCLGKLFCTILNQYLSSRIDRARLLSDLQGRFCRRRGCREHSFLLPS--SLYSAKRRRRGRVFCAFVDFRKAYDTVRHSILWSRSLSLGMGPKLVELLKSIYTKVKCSVRHGTNLSSFFDYLVGVRQGCVLSPLVFNLFIDELVKTLA*AGGELAGVQVGDLIIFTLLYADDVVLMAEEAAHLQRLLNSLDVFCGVSAMSDNISKTMVVPFFSKNPLD-EFSFVFVNKQLKVVNEYKYLGCYFDREVSFKFHIEAALQRAAKASFAFFSDIENLTN---LKTSLIVRLYHTLVLSVLLYNAEVWGLLILKGSLKKLEKFYLACLKRILKVGRGFSTAAVFWLLGVTDISTMIRLKSLKF 1293 I + LK K+SGID + N++FI + + D L +LFN +L S FP+QW +I PL K DTNNYR I+L SC GKLF ++LN+ L + L+D Q F + F+L S +LY++K +R ++ AFVD++KAYDT+ + LW + + G+ K+++LL+S+Y V+ V+H +LS FF +G+ QG + SP++F+ FI++L L L+G+ + + I+ +L+ADD +L+++ LQ L+ L +C + ++ NI+KT +V F + L + + + +++V ++ YLG SFK IE +A KA + ++ LT + ++ + L+ + V S+L Y+ E+WG G KLE+ + LKR+L V AAV+ G + +++++K+ Sbjct: 371 IRKACSKLKRNKSSGIDCIINEYFIETIDILSDSLEILFNSILESGKFPKQWTQGVIVPLLKKPPATDTNNYRGITLTSCFGKLFTSVLNERLKNWAIENERLTDAQFGFRSGHSTTDAMFILQSLINLYNSKNKR---LYAAFVDYQKAYDTIYRNGLWYKLIREGVDGKMLKLLRSMYEDVQSCVKHMNSLSDFFSCDMGLFQGEITSPILFSFFINDLEMHLQ--SNILSGLNLDQICIYLILFADDCILLSDTPEGLQSHLDLLYDYCRLWKLTVNINKTKIVVFKKRGRLTVNEKWKYAGEDIEIVGQFNYLGFVVSSNGSFKHGIETLAGKALKAM----NSLQMLTRGMEIPVNIRLNLFDSYVSSILCYSCEIWGFT--NGD--KLERLHRKFLKRMLNVKMSTCNAAVYVETGRFPLCVNWKIRTVKY 794
BLAST of mRNA_H-akashiwo_Contig1000.7.1 vs. uniprot
Match: UPI001E1D4669 (uncharacterized protein LOC123532388 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D4669) HSP 1 Score: 224 bits (570), Expect = 7.740e-61 Identity = 155/442 (35.07%), Postives = 250/442 (56.56%), Query Frame = 1 Query: 13 LKHLKHRKASGIDGVKNDFFIFSAPYILDMLHL-LFNKMLHSRYFPEQWNLVMIAPLFKS-GDQNDTNNYRDISLLSCLGKLFCTILNQYLSSRIDRARLLSDLQGRFCRRRGCREHSFLLPSSLYSAKRRRRGRVFCAFVDFRKAYDTVRHSILWSRSLSLGMGPKLVELLKSIYTKVKCSVRHGTNLSSFFDYLVGVRQGCVLSPLVFNLFIDEL----VKTLA*AGGELAGVQVGDLI----IFTLLYADDVVLMAEEAAHLQRLLNSLDVFCGVSAMSDNISKTMVVPFFSKNPLDEFSFVFVNKQLKVVNEYKYLGCYFDREVSF---KFHIEAALQRAAKASFAFFSDIENL--TNLKTSLIVRLYHTLVLSVLLYNAEVWGLLILKGSLKKLEKFYLACLKRILKVGRGFSTAAVFWLLGVTDISTMIRLKSLKF 1293 +K LK+ KASG+D + N+ I S +I+ ++L LFN + +S PE W + +I P++K+ GD NYR I+LLSCLGKLF ++N L+ I+ +L + Q F R++ + L+ L + RG++FCAF+D ++A+DTV + LW + L+L + K ++L++++Y +K VR + S FF VGVRQG LSPL+F+L++++L ++ +G +A Q G L F LLYADD V+++E LQ+ L+ +C ++ N SK+ ++ FS+ +F+F N+++++VNEYKYLG F R SF K HI A++A+ A +S I N +L L + L++ + +LLY AE+WG G+ + +E+ L LK +LK+ R V+ G I+ I K + F Sbjct: 733 IKSLKNNKASGVDKIVNEH-IKSTYHIMKGIYLNLFNLVFNSGVIPESWTIGVINPIYKNKGDILKPENYRPITLLSCLGKLFTFVINNRLTKYIEENNVLHNCQAGF-RKKFSTSDNMLILHHLIQYQSTNRGKLFCAFIDLKQAFDTVWRNGLWQKLLNLNINGKCLKLIQNMYQNIKSCVRANSECSQFFTCNVGVRQGENLSPLLFSLYLNDLNDFFLQNNFESGVTIASYQNGALRDFLKSFILLYADDTVILSESETGLQKALDLYAQYCDQWKLTVNTSKSKII-IFSRGRQPNCNFLFKNERMEIVNEYKYLGILFSRNGSFNKCKSHI------ASQATRAMYSLIRNSHRLDLPVDLQIDLFNKTIKPILLYGAEIWG----TGNNEVIERVQLKFLKYVLKLKRSTPGYMVYGETGCMPINIDIEEKIISF 1161
BLAST of mRNA_H-akashiwo_Contig1000.7.1 vs. uniprot
Match: A0A354GHD9_9FLAO (Reverse transcriptase domain-containing protein n=2 Tax=Tenacibaculum sp. TaxID=1906242 RepID=A0A354GHD9_9FLAO) HSP 1 Score: 223 bits (567), Expect = 1.870e-60 Identity = 146/421 (34.68%), Postives = 228/421 (54.16%), Query Frame = 1 Query: 13 LKHLKHRKASGIDGVKNDFFIFSAPYILDMLHLLFNKMLHSRYFPEQWNLVMIAPLFKS-GDQNDTNNYRDISLLSCLGKLFCTILNQYLSSRIDRARLLSDLQGRFCRRRGCREHSFLLPSSLYSAKRRRRGRVFCAFVDFRKAYDTVRHSILWSRSLSLGMGPKLVELLKSIYTKVKCSVRHGTNLSSFFDYLVGVRQGCVLSPLVFNLFIDELVKTLA*AGGELAGVQ------VGD------LIIFTLLYADDVVLMAEEAAHLQRLLNSLDVFCGVSAMSDNISKTMVVPFFSKNPLDEFSFVFVNKQLKVVNEYKYLGCYFDREVSFKFHIEAALQRAAKASFAFFSDIENLTNLKTSLIVRLYHTLVLSVLLYNAEVWGLLILKGSLKKLEKFYLACLKRILKVGRGFSTAAVF 1236 +K LK+ KA G D + N++ + + + LFN +L S P W + MI PLFK+ G +D NNYR I+LLS LGKLF + LN LS+ ++ L + Q F H F+L L +R+ R++CAF+D+ KA+D + S LW + L+LG+ ++ ++ ++Y+K K V++G +LS F+ VGVRQG LSPL+F +++++ ++ LA V +GD L ++ LLYADD +++AE LQ LNS+ +C + + N++KT ++ F + F + N+Q++VV +Y YLG F+ SF +E +A KA F+ + L L + + L+ VL VLLY EVWG ++ +E FY LK ILKVG+ V+ Sbjct: 526 IKKLKNGKACGADNIVNEYLKNCPVAMKNAIVTLFNLVLKSGVVPSDWCIGMIIPLFKNKGSVDDVNNYRGITLLSVLGKLFTSALNSRLSAYLESLSALGEDQAGFREGYSTLNHIFVL-HCLIDFYLQRKKRLYCAFIDYSKAFDLIDRSTLWMKVLNLGIRGNIINVIFNLYSKAKSCVKNGNDLSQLFNCNVGVRQGENLSPLLFAIYLNDFALYVSQEYEGLAFVSEETSRLLGDEAVDMFLRLYILLYADDTIVLAESPLQLQHALNSVKDYCDKNYLKLNLTKTKIIVFSRGKIRNIPKFFYGNEQVEVVKDYVYLGVKFNYNGSFTKAMEKQTDQARKAMFSMLTKARRL-QLPVDIQIELFEKTVLPVLLYGCEVWGC----ANIDAIEVFYRKFLKIILKVGKATPNCIVY 940 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1000.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1000.7.1 >prot_H-akashiwo_Contig1000.7.1 ID=prot_H-akashiwo_Contig1000.7.1|Name=mRNA_H-akashiwo_Contig1000.7.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=192bp MLHLLFNKMLHSRYFPEQWNLVMIAPLFKSGDQNDTNNYRDISLLSCLGKback to top mRNA from alignment at H-akashiwo_Contig1000:368908..370203+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1000.7.1 ID=mRNA_H-akashiwo_Contig1000.7.1|Name=mRNA_H-akashiwo_Contig1000.7.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1296bp|location=Sequence derived from alignment at H-akashiwo_Contig1000:368908..370203+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1000:368908..370203+ >mRNA_H-akashiwo_Contig1000.7.1 ID=mRNA_H-akashiwo_Contig1000.7.1|Name=mRNA_H-akashiwo_Contig1000.7.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=576bp|location=Sequence derived from alignment at H-akashiwo_Contig1000:368908..370203+ (Heterosigma akashiwo CCMP452)back to top |