mRNA_H-akashiwo_Contig100.18.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig100.18.1 vs. uniprot
Match: A0A7S4DD78_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD78_HETAK) HSP 1 Score: 474 bits (1221), Expect = 5.670e-164 Identity = 227/303 (74.92%), Postives = 262/303 (86.47%), Query Frame = 2 Query: 410 SVVSNLKTSFVSRFSITDLGPLTSILGIKVSRDHTNKCFYLSQASFIRDAISKFGLDFLPACRTPMTTATDLTPTPGFKASLPDANRYRSMVGTLAWVANWTRPELAFTVHKLQRYQNNPEPKHFEAAQRAFRYLKGTQSERLRLGGDLVLRAYTDADFCQDRIDGKSVTGYVIMLGDSPIVWASKLQTAVTTSTVEAEYLALRAGLKDIMWLRHLLVDLSCPQVEPTPVIEDNSACIEWARDMVVSRKTRHFHVSYHLAEEQVELGTIQMHYAKSSDQLADIFTKALNAEVFDRHQHVLHNG 1318 +VVS K S S++S+TD G LT ILGIKV RD NKCF+LSQ SFI+DA++KFGLD+LPAC+TP+ DLTPTPGFKA L DAN YRSMVGTLAWVANWTRPELAFTVHKLQR Q NPEPKHFEA QRAFRYLKGTQSE LRLGGDLVLRA++D+DFC DR+DGKSVTGY++ LGD+PIVW+SKLQ AVTTSTVEAEYLALR+ +KDIMWLR LL ++ CPQ EPTPV+EDNSAC+EWA DM+V+++ RHFHVSYHLA+EQV LGTI+M Y K+ DQ+ADI TKALNA F+RHQ VLH+G Sbjct: 48 AVVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLEEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKALNAANFERHQRVLHHG 350
BLAST of mRNA_H-akashiwo_Contig100.18.1 vs. uniprot
Match: A0A7S3Y3B6_HETAK (Hypothetical protein (Fragment) n=6 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3B6_HETAK) HSP 1 Score: 324 bits (830), Expect = 5.200e-104 Identity = 177/229 (77.29%), Postives = 187/229 (81.66%), Query Frame = 2 Query: 44 LLRGGFTWREGVDFSMTYSPVIAAPSLRLMLSIAANKGHAVEALDISTAFLNSDIDG-AFVKQPPGFVDKDHPHKAWKLKKALSAYA-SPQDYGMSLHEFLLQQNFVRSD-SSPAFT------------------LAKILNIPSVVSNLKTSFVSRFSITDLGPLTSILGIKVSRDHTNKCFYLSQASFIRDAISKFGLDFLPACRTPMTTATDLTPTPGFKASLPDAN 667 L+ GFT REGVDFS TYSPVIAAPSLRLMLSIAANKGHAVEALDISTAFLNSDIDG +VKQPPGFVDKDHPHK WKLKKAL SP+ + +LHEFLLQQNFVRSD S +T L NIPSVVS+LK+SFVSRFSITDLGPLTSILGIKVSRDHTNKCFYLSQASF+RDAISKFGLD+LPACRTPMT ATDLTPTPGFKASLPDAN Sbjct: 181 LVAQGFTQREGVDFSTTYSPVIAAPSLRLMLSIAANKGHAVEALDISTAFLNSDIDGDVYVKQPPGFVDKDHPHKVWKLKKALYGLRQSPRLWYNTLHEFLLQQNFVRSDYESCLYTRKNSVTGEDTMVAVYVDDLVLSSNIPSVVSSLKSSFVSRFSITDLGPLTSILGIKVSRDHTNKCFYLSQASFVRDAISKFGLDYLPACRTPMTNATDLTPTPGFKASLPDAN 409
BLAST of mRNA_H-akashiwo_Contig100.18.1 vs. uniprot
Match: A0A7S3Y6S2_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6S2_HETAK) HSP 1 Score: 296 bits (758), Expect = 3.670e-95 Identity = 157/266 (59.02%), Postives = 189/266 (71.05%), Query Frame = 2 Query: 74 GVDFSMTYSPVIAAPSLRLMLSIAANKGHAVEALDISTAFLNSDI-DGAFVKQPPGFVDKDHPHKAWKLKKALSAYA-SPQDYGMSLHEFLLQQNFVRS----------DSSPAFTLAKILN-------IPSVVSNLKTSFVSRFSITDLGPLTSILGIKVSRDHTNKCFYLSQASFIRDAISKFGLDFLPACRTPMTTATDLTPTPGFKASLPDANRYRSMVGTLAWVANWTRPELAFTVHKLQRYQNNPEPKHFEAAQRAFRYL 814 G+DF TYSPV+ A SLRL+L+I+ANKG+AV++LDISTAFLN + D +V+QPP +VD HP+K WKL KAL SP+ + M LH+ L F RS D +A ++ ++VS K S S++++TD G LT ILGIKV RD NKCF+LSQ SFI+DA++KFGLD+LPAC+TP+ DLTPTPGFKA L DAN YRSMVGTLAWVANWTRPELAFTVHKLQR Q NPEPKHFEA QRAFRYL Sbjct: 3 GIDFQQTYSPVVNAASLRLLLAISANKGYAVDSLDISTAFLNGAMTDDVYVRQPPSYVDPQHPNKVWKLNKALYGLKQSPRVWYMELHDHLESLGFKRSGHESCLYIHRDGGNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPIDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYL 268
BLAST of mRNA_H-akashiwo_Contig100.18.1 vs. uniprot
Match: A0A7S3Y1P1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1P1_HETAK) HSP 1 Score: 293 bits (749), Expect = 3.940e-86 Identity = 171/446 (38.34%), Postives = 258/446 (57.85%), Query Frame = 2 Query: 56 GFTWREGVDFSMTYSPVIAAPSLRLMLSIAANKGHAVEALDISTAFLNSDID-GAFVKQPPGFVDKDHPHKAWKLKKALSAYA-SPQDYGMSLHEFLLQQNFVRS----------DSSPAFTLAKILNIPSVVSNLKTSFVSR--------FSITDLGPLTSILGIKVSRDHTNKCFYLSQASFIRDAISKFGLDFLPACRTPMTTATD--LTPTPGFKASLPDANRYRSMVGTLAWVANWTRPELAFTVHKLQRYQNNPEPKHFEAAQRAFRYLKGTQSERLRLGGDLVLRAYTDADFCQDRIDGKSVTGYVIMLGDSPIVWASKLQTAVTTSTVEAEYLALRAGLKDIMWLRHLLVDLSCPQVEPTPVIEDNSACIEWARDMVVSRKTRHFHVSYHLAEEQVELGTIQMHYAKSSDQLADIFTKALNAEV-FDRHQHVLHNGLS 1324 G++ EGVD++ T+SPV+++ SLR +L+IAA++ + +DI TAFL+ ++ ++KQP G+ HK KLKK+L +P+ + +L+ FLLQQ + R+ S+ TL + V+++ S +SR ++++D+G + SILGIKV RD T + LSQ SFI +A KF + P+ D + + S +A ++RS+VGT+ W+A WT PE+A+++H L + +P A+ RYL T+ + + LGG L L AY DADFC +R G+S +G+ I LG SPI+W+S++Q VT +T EAEY++LR + D+MWL+ LL L Q P+ EDN ACI WA D VS+ RH HVSYH +E V+ I++ Y + Q+AD+FTK L+ F + VLH LS Sbjct: 555 GYSQIEGVDYTNTFSPVVSSASLRTVLTIAASEDMEIHCMDIKTAFLHGKLEEDIYMKQPEGYEVPGMEHKVLKLKKSLYGLKQAPKCWYQNLNGFLLQQGYTRNGYDSCVYSKVSSTGGKTLISVYVDDIVLASSDKSELSRIKKAISLGYNVSDMGEIESILGIKVQRDRTARTITLSQHSFIEEACEKFQVRSYEPVTNPVNKGIDVNINTDTSRRLSTFEAKKFRSLVGTVNWLALWTFPEVAYSIHTLSKRFTSPSANCLAASYHLLRYLWWTEDKGVTLGGPLNLTAYADADFCSERHKGRSRSGFAIFLGFSPIIWSSRMQHCVTRNTTEAEYVSLRNAVTDVMWLKRLLESLGYKQ-GCVPIYEDNKACITWANDETVSKSARHIHVSYHYTKEMVQSKEIEVKYVDTKHQIADVFTKPLDFNNGFKKFSRVLHGKLS 999
BLAST of mRNA_H-akashiwo_Contig100.18.1 vs. uniprot
Match: A5BCL1_VITVI (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Vitis vinifera TaxID=29760 RepID=A5BCL1_VITVI) HSP 1 Score: 242 bits (617), Expect = 2.510e-71 Identity = 152/437 (34.78%), Postives = 243/437 (55.61%), Query Frame = 2 Query: 44 LLRGGFTWREGVDFSMTYSPVIAAPSLRLMLSIAANKGHAVEALDISTAFLNSDI-DGAFVKQPPGFVDKDHPHKAWKLKKALSAYA-SPQDYGMSLHEFLLQQNFVRSDSSPA-----------FTLAKILNIPSVVSNLKTS--FVS----RFSITDLGPLTSILGIKVSRDHTNKCFYLSQASFIRDAISKFGLDFLPACRTPMTTATDLTPTPGFKASLPDANRYRSMVGTLAWVANWTRPELAFTVHKLQRYQNNPEPKHFEAAQRAFRYLKGTQSE--RLRLGGDLVLRAYTDADFCQDRIDGKSVTGYVIMLGDSPIVWASKLQTAVTTSTVEAEYLALRAGLKDIMWLRHLLVDLSCPQVEPTPVIEDNSACIEWARDMVVSRKTRHFHVSYHLAEEQVELGTIQMHYAKSSDQLADIFTKALNAEVFD 1291 L+ GF R G+D+S T+SPVI ++RL+LS+A ++G ++ LD++ AFL + + F+ QPPGF+D+DHPH KL+KA+ +P+ + L +FLLQ F+ S + + + L + +I +N++ + F+ RFS+ DLGPLT LG++V+ HTN F LSQ +I D +++ + TP+ T+ LT G L D YR++VG+L +++ TRP++A+TV+KL ++ + P H+ A +R RYL GT LR L L A++D+D+ ++ D S + Y+I LG +PI W+SK Q V S+ EAEY ++ + +I W+ LL +L + + DN + V + +H + YH EQV+ G +++ + +SDQLAD TK L FD Sbjct: 22 LVAKGFHQRPGIDYSETFSPVIKPTTVRLVLSLAVSQGWSLRQLDVNNAFLQGTLTEDVFMSQPPGFIDRDHPHHVCKLRKAIYGLKQAPRAWYHELCQFLLQFGFINSIADTSLFIFNNHDTILYLLVYVDDIIITGNNVEAAQTFIQQLSQRFSLKDLGPLTYFLGVEVT-SHTNGLF-LSQRKYIADLLNRTHMTEAKPAPTPLATSPILTLQSG--TPLSDPTEYRTVVGSLQYLS-LTRPDIAYTVNKLSQFMHQPTSDHWNAVKRLLRYLCGTLDHDITLRRTSPLALHAFSDSDWAGNKDDFTSTSAYIIYLGHNPISWSSKKQRTVARSSTEAEYRSVASTAAEIRWICSLLTELGVTLPQQPVIYCDNVGATNLCSNPVFHSRMKHVALDYHFIREQVQNGLLRVSHISASDQLADALTKPLARPQFD 453
BLAST of mRNA_H-akashiwo_Contig100.18.1 vs. uniprot
Match: A0A2N9GZS2_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GZS2_FAGSY) HSP 1 Score: 249 bits (636), Expect = 7.210e-70 Identity = 152/437 (34.78%), Postives = 238/437 (54.46%), Query Frame = 2 Query: 44 LLRGGFTWREGVDFSMTYSPVIAAPSLRLMLSIAANKGHAVEALDISTAFLNSDI-DGAFVKQPPGFVDKDHPHKAWKLKKALSAYA-SPQDYGMSLHEFLLQQNFVRSDSSPA---FTLAKIL--------------NIPSVVSNLKTSFVSRFSITDLGPLTSILGIKVSRDHTNKCFYLSQASFIRDAISKFGLDFLPACRTPMTTATDLTPTPGFKASLPDANRYRSMVGTLAWVANWTRPELAFTVHKLQRYQNNPEPKHFEAAQRAFRYLKGTQSERLRLG-GDLVLRAYTDADFCQDRIDGKSVTGYVIMLGDSPIVWASKLQTAVTTSTVEAEYLALRAGLKDIMWLRHLLVDLSCPQVEPTPVIEDNSACIEWARDMVVSRKTRHFHVSYHLAEEQVELGTIQMHYAKSSDQLADIFTKALNAEVFDR 1294 L+ GF + G+DF T+SPV+ P++R++LS+AA + LDIS AFL+ + + F+ QPPGF D+P+ KL K+L +P+ + LL F S + P+ F IL N + +++L T + F + DLGPL LG+++ ++ + C ++ Q +I D +SKF + A TP + + L P+ KA L D YRS+VG L + A +TRP++ + V+++ +Y + P HF A+R +YL+GT S +R G VL A+TD+D+ D D +S TG + LG++PI W SK Q V+ S+ EAEY AL G+ ++ WLR +L DL + DN++ I A + + +T+H V YH E+V G + + + + DQLAD+FTK L+ + F R Sbjct: 639 LVAKGFHQQPGLDFDETFSPVVKPPTVRIVLSLAAQHQWPLRQLDISNAFLHGFLKEDVFMLQPPGFAHSDYPNHVCKLHKSLYILKQAPRAWFERFTSHLLTIGFTASTADPSLFVFRQGSILLHLLLYVDDIILTGNSIAAITSLITQLAATFELKDLGPLRYFLGLQI--EYGSDCLFVHQRKYITDLLSKFNMPTCKAASTPFSISHKLQPST--KALLSDPTPYRSLVGALQY-ATFTRPDITYAVNQVCQYMHKPTATHFAVAKRILQYLQGTLSLGIRFKTGSPVLIAFTDSDWAGDPYDRRSTTGITVFLGNNPITWISKKQHTVSRSSTEAEYKALAFGVAELAWLRQVLCDLGVVLPNAPTMWCDNTSAIALASNPIFHSRTKHIEVDYHFVRERVVRGDLHLQFISTDDQLADLFTKPLSTQRFQR 1070
BLAST of mRNA_H-akashiwo_Contig100.18.1 vs. uniprot
Match: W1QI12_OGAPD (Polyprotein (Gag/pol) of Ty1/Copia retrotransposon n=4 Tax=Ogataea TaxID=461281 RepID=W1QI12_OGAPD) HSP 1 Score: 237 bits (604), Expect = 1.160e-69 Identity = 146/444 (32.88%), Postives = 238/444 (53.60%), Query Frame = 2 Query: 44 LLRGGFTWREGVDFSMTYSPVIAAPSLRLMLSIAANKGHAVEALDISTAFLNSD-IDGAFVKQPPGFVDKDHPHKAWKLKKALSAYA-SPQDYGMSLHEFLLQQNFVR---------SDSSPAFTLAKILNIPSVVS-------NLKTSFVSRFSITDLGPLTSILGIKVSRDHTNKCFYLSQASFIRDAISKFGLDFL-PACRTPMTTATDLTPTPGFKASLPDANRYRSMVGTLAWVANWTRPELAFTVHKLQRYQNNPEPKHFEAAQRAFRYLKGTQSERLRLG--GDLVLRAYTDADFCQDRIDGKSVTGYVIMLGDSPIVWASKLQTAVTTSTVEAEYLALRAGLKDIMWLRHLLVDLSCPQVEPTPVIEDNSACIEWARDMVVSRKTRHFHVSYHLAEEQVELGTIQMHYAKSSDQLADIFTKALNAEVFDRHQHVLH 1312 L+ GF+ G+D++ T+SPVI SLRL+L++AA+ +V +D++TAFLN + ++ +++QPPGF+ DHP + +L K+L +P + ++ + L+Q NF R S SSP +A ++ ++S ++++ S+F + DLGP+T+ LG+ + + T + LS +S++ + FGLD P R TTA L D +RSMV L + AN RP++ FTV KL RY P H A+ RYLKGT + + + L+ + DAD+ D S TGY+ ML + PI W SK Q ++ TST EAEY+A+ +K+++WL+ L+ +LS + DN++ I A+ ++T+H + YH + + G +Q+ Y S +AD+ TK L E + + +H Sbjct: 14 LVAQGFSQIHGIDYNETFSPVIRYDSLRLLLALAASHSLSVYQMDVTTAFLNGNLVEELYMRQPPGFISTDHPQRVCRLHKSLYGLKQAPLCWNHTIDQVLVQANFTRIKSDYGIYVSHSSPPTYVALYVDDLLILSKSLTQIKSVQSLLSSKFQMKDLGPVTTFLGLNIRQ--TPQSITLSLSSYLTSILQDFGLDTCNPVTRVSTTTAW----ISDHDVPLTDPTLFRSMVEKLLFAANTARPDITFTVAKLSRYLKQPSQNHLTIAKHVLRYLKGTIDDGITYTRTSSVELKGFCDADWGGILEDRTSTTGYIFMLANGPISWKSKKQNSIATSTTEAEYMAMSDAVKELLWLKQLMKELSVLGSYVPILFGDNTSSISLAKHPTQHQRTKHIDIRYHFIRDHILKGDLQIEYVDSQSNIADLLTKQLVREKLNSLKKKMH 451
BLAST of mRNA_H-akashiwo_Contig100.18.1 vs. uniprot
Match: A0A438BWW2_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=4 Tax=Vitis vinifera TaxID=29760 RepID=A0A438BWW2_VITVI) HSP 1 Score: 243 bits (620), Expect = 7.170e-69 Identity = 152/437 (34.78%), Postives = 243/437 (55.61%), Query Frame = 2 Query: 44 LLRGGFTWREGVDFSMTYSPVIAAPSLRLMLSIAANKGHAVEALDISTAFLNSDI-DGAFVKQPPGFVDKDHPHKAWKLKKALSAYA-SPQDYGMSLHEFLLQQNFVRSDSSPA-----------FTLAKILNIPSVVSNLKTS--FVS----RFSITDLGPLTSILGIKVSRDHTNKCFYLSQASFIRDAISKFGLDFLPACRTPMTTATDLTPTPGFKASLPDANRYRSMVGTLAWVANWTRPELAFTVHKLQRYQNNPEPKHFEAAQRAFRYLKGTQSE--RLRLGGDLVLRAYTDADFCQDRIDGKSVTGYVIMLGDSPIVWASKLQTAVTTSTVEAEYLALRAGLKDIMWLRHLLVDLSCPQVEPTPVIEDNSACIEWARDMVVSRKTRHFHVSYHLAEEQVELGTIQMHYAKSSDQLADIFTKALNAEVFD 1291 L+ GF R G+D+S T+SPVI ++RL+LS+A ++G ++ LD++ AFL + + F+ QPPGF+D+DHPH KL+KA+ +P+ + L +FLLQ F+ S + + + L + +I +N++ + F+ RFS+ DLGPLT LG++V+ HTN F LSQ +I D +++ + TP+ T+ LT G L D YR++VG+L +++ TRP++A+TV+KL ++ + P H+ A +R RYL GT LR L L A++D+D+ ++ D S + Y+I LG +PI W+SK Q V S+ EAEY ++ + +I W+ LL +L + + DN + V + +H + YH EQV+ G +++ + +SDQLAD TK L FD Sbjct: 354 LVAKGFHQRPGIDYSETFSPVIKPTTVRLVLSLAVSQGWSLRQLDVNNAFLQGTLTEDVFMSQPPGFIDRDHPHHVCKLRKAIYGLKQAPRAWYHELRQFLLQFGFINSIADTSLFIFNNHGTILYLLVYVDDIIITGNNVEAAQTFIQQLSQRFSLKDLGPLTYFLGVEVT-SHTNGLF-LSQRKYIADLLNRTHMTEAKPAPTPLATSPILTLQSG--TPLSDPTEYRTVVGSLQYLS-LTRPDIAYTVNKLSQFMHQPTSDHWNAVKRLLRYLCGTLDHGITLRRTSPLALHAFSDSDWAGNKDDFTSTSAYIIYLGHNPISWSSKKQRTVARSSTEAEYRSVASTAAEIRWICSLLTELGVTLPQQPVIYCDNVGATNLCSNPVFHSRMKHVALDYHFIREQVQNGLLRVSHISASDQLADALTKPLARPQFD 785
BLAST of mRNA_H-akashiwo_Contig100.18.1 vs. uniprot
Match: A0A438GGH7_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=3 Tax=Vitis vinifera TaxID=29760 RepID=A0A438GGH7_VITVI) HSP 1 Score: 236 bits (601), Expect = 1.130e-68 Identity = 149/437 (34.10%), Postives = 241/437 (55.15%), Query Frame = 2 Query: 44 LLRGGFTWREGVDFSMTYSPVIAAPSLRLMLSIAANKGHAVEALDISTAFLNSDI-DGAFVKQPPGFVDKDHPHKAWKLKKALSAYA-SPQDYGMSLHEFLLQQNFVRSDSSPA-----------FTLAKILNIPSVVSNLKTS--FVS----RFSITDLGPLTSILGIKVSRDHTNKCFYLSQASFIRDAISKFGLDFLPACRTPMTTATDLTPTPGFKASLPDANRYRSMVGTLAWVANWTRPELAFTVHKLQRYQNNPEPKHFEAAQRAFRYLKGTQSERLRL--GGDLVLRAYTDADFCQDRIDGKSVTGYVIMLGDSPIVWASKLQTAVTTSTVEAEYLALRAGLKDIMWLRHLLVDLSCPQVEPTPVIEDNSACIEWARDMVVSRKTRHFHVSYHLAEEQVELGTIQMHYAKSSDQLADIFTKALNAEVFD 1291 L+ GF G+D+S T+SPVI ++RL+LS+A ++G ++ LD++ FL + + F+ QPPGF+D+DHPH KL+KA+ +P+ + LH+FLLQ F+ S + + + L + +I +N++ + F+ RFS+ DLGPLT LG++V+ HTN F LSQ +I D +++ + P+ T+ LT G L D YR+MVG+L +++ TRP++A+ V+KL ++ + P H+ A +R RYL GT + L L L A++D+D+ ++ D S + Y+I LG +PI W+SK Q V S++EAEY ++ + +I W+ LL +L + + DN + V + +H + YH EQV+ G +++ + +SDQLAD TK L FD Sbjct: 49 LVAKGFHQCPGIDYSETFSPVIKPTTVRLVLSLAVSQGWSLRQLDVNNTFLQGTLTEDLFMSQPPGFIDRDHPHHVCKLRKAIYGLKQAPRAWYHELHQFLLQFGFINSIADTSLFIFNNHGTILYLLVYVDDIIITGNNVEAAQTFIQQLSQRFSLKDLGPLTYFLGVEVT-SHTNGLF-LSQRKYIADLLNRTHMTEAKPAPIPLATSPILTLQSG--TLLSDPTEYRTMVGSLQYLS-LTRPDIAYKVNKLSQFMHQPTSDHWNAVKRLLRYLCGTLDHGITLCRTSPLALHAFSDSDWAGNKDDFTSTSAYIIYLGHNPISWSSKKQQTVARSSIEAEYRSVASIAAEIRWICSLLNELGVTLPQQPVIYCDNVGATNLCSNPVFHSRMKHVALDYHFIREQVQNGLLRVSHISTSDQLADALTKPLARPQFD 480
BLAST of mRNA_H-akashiwo_Contig100.18.1 vs. uniprot
Match: A0A2N9FIJ5_FAGSY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9FIJ5_FAGSY) HSP 1 Score: 245 bits (625), Expect = 1.920e-68 Identity = 151/437 (34.55%), Postives = 233/437 (53.32%), Query Frame = 2 Query: 44 LLRGGFTWREGVDFSMTYSPVIAAPSLRLMLSIAANKGHAVEALDISTAFLNSDI-DGAFVKQPPGFVDKDHPHKAWKLKKALSAYA-SPQDYGMSLHEFLLQQNFVRSDSSPAF-------TLAKIL----------NIPSVVSNLKTSFVSRFSITDLGPLTSILGIKVSRDHTNKCFYLSQASFIRDAISKFGLDFLPACRTPMTTATDLTPTPGFKASLPDANRYRSMVGTLAWVANWTRPELAFTVHKLQRYQNNPEPKHFEAAQRAFRYLKGTQSERLRL-GGDLVLRAYTDADFCQDRIDGKSVTGYVIMLGDSPIVWASKLQTAVTTSTVEAEYLALRAGLKDIMWLRHLLVDLSCPQVEPTPVIEDNSACIEWARDMVVSRKTRHFHVSYHLAEEQVELGTIQMHYAKSSDQLADIFTKALNAEVFDR 1294 L+ GF + G+DF T+SPV+ P++R++LS+AA + LDIS AFL+ + + ++ QPPGFVD HP KL+K+L +P+ + LL FV S + P+ T+ +L N S V++L F + DLGPL LG+++ + T ++ Q +I D + KF + TP + + L P+ LPD +YRS+VG L + A +TRP++ + V+++ +Y + P H AA+R RYL+GT +R G L A+TD+D+ D D +S TG + LG++PI W SK Q V+ S+ EAEY AL G ++ WLR +L DL + DN++ I A + V +T+H V YH E+V G + +H+ + DQLAD+FTK L + F++ Sbjct: 608 LVAKGFHQQAGLDFDETFSPVVKPPTVRIVLSLAAQHQWPLRQLDISNAFLHGFLKEDVYMIQPPGFVDPTHPDHVCKLQKSLYGLKQAPRAWFERFTSHLLTIGFVASTADPSLFVLRTGSTVLYLLLYVDDIILTGNSSSAVASLIAQLAETFELKDLGPLRFFLGLQIDYNRTG--LFVHQRKYISDLLLKFNMTNCKPASTPFSISQKLQPSTD--DVLPDPTQYRSLVGALQY-ATFTRPDITYAVNQVCQYMHKPNSTHLVAAKRILRYLQGTLHLGIRFQSGSSSLTAFTDSDWAGDPYDRRSTTGITVFLGNNPITWVSKKQHTVSRSSTEAEYRALATGAAELAWLRQVLCDLGVYLPTAPTMWCDNTSAIALASNPVFHSRTKHIEVDYHFVRERVVRGDLHLHFISTEDQLADLFTKPLTTQRFNQ 1039 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig100.18.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig100.18.1 >prot_H-akashiwo_Contig100.18.1 ID=prot_H-akashiwo_Contig100.18.1|Name=mRNA_H-akashiwo_Contig100.18.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=442bp MQMAISRNIRLDLLRGGFTWREGVDFSMTYSPVIAAPSLRLMLSIAANKGback to top mRNA from alignment at H-akashiwo_Contig100:614486..615875+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig100.18.1 ID=mRNA_H-akashiwo_Contig100.18.1|Name=mRNA_H-akashiwo_Contig100.18.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1390bp|location=Sequence derived from alignment at H-akashiwo_Contig100:614486..615875+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig100:614486..615875+ >mRNA_H-akashiwo_Contig100.18.1 ID=mRNA_H-akashiwo_Contig100.18.1|Name=mRNA_H-akashiwo_Contig100.18.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=1326bp|location=Sequence derived from alignment at H-akashiwo_Contig100:614486..615875+ (Heterosigma akashiwo CCMP452)back to top |