prot_H-fluviatilis_contig100029.68.1 (polypeptide) Heribaudiella fluviatilis SAG_13_90

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-fluviatilis_contig100029.68.1
Unique Nameprot_H-fluviatilis_contig100029.68.1
Typepolypeptide
OrganismHeribaudiella fluviatilis SAG_13_90 (Heribaudiella fluviatilis SAG_13_90)
Sequence length40
Homology
BLAST of mRNA_H-fluviatilis_contig100029.68.1 vs. uniprot
Match: D8LIY1_ECTSI (ClpS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIY1_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 9.220e-17
Identity = 36/40 (90.00%), Postives = 39/40 (97.50%), Query Frame = 0
Query:    1 MKKAYEVTMETHKAGKATVTQAWKSKAEGYCLKLQQCGLT 40
            MKKAYEVTMETHK+GKATVTQAWKSK+E YCL+LQQCGLT
Sbjct:  141 MKKAYEVTMETHKSGKATVTQAWKSKSESYCLQLQQCGLT 180          
BLAST of mRNA_H-fluviatilis_contig100029.68.1 vs. uniprot
Match: A0A835ZHY3_9STRA (Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHY3_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 7.300e-16
Identity = 35/40 (87.50%), Postives = 37/40 (92.50%), Query Frame = 0
Query:    1 MKKAYEVTMETHKAGKATVTQAWKSKAEGYCLKLQQCGLT 40
            MK AYE+TMETHKAGKATVTQAWKS+AE YCL LQQCGLT
Sbjct:   60 MKIAYEITMETHKAGKATVTQAWKSQAETYCLGLQQCGLT 99          
BLAST of mRNA_H-fluviatilis_contig100029.68.1 vs. uniprot
Match: A0A835ZBL6_9STRA (Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBL6_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 1.290e-15
Identity = 35/40 (87.50%), Postives = 37/40 (92.50%), Query Frame = 0
Query:    1 MKKAYEVTMETHKAGKATVTQAWKSKAEGYCLKLQQCGLT 40
            MK AYE+TMETHKAGKATVTQAWKS+AE YCL LQQCGLT
Sbjct:  107 MKIAYEITMETHKAGKATVTQAWKSQAETYCLGLQQCGLT 146          
BLAST of mRNA_H-fluviatilis_contig100029.68.1 vs. uniprot
Match: A0A7S2EBD0_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EBD0_TRICV)

HSP 1 Score: 56.2 bits (134), Expect = 2.740e-8
Identity = 25/39 (64.10%), Postives = 32/39 (82.05%), Query Frame = 0
Query:    2 KKAYEVTMETHKAGKATVTQAWKSKAEGYCLKLQQCGLT 40
            K+A+++ METH  GKATVT+AW+ KAE YCL LQ+ GLT
Sbjct:  174 KRAFDICMETHGIGKATVTKAWRQKAEQYCLNLQRQGLT 212          
BLAST of mRNA_H-fluviatilis_contig100029.68.1 vs. uniprot
Match: A0A6U6HVZ7_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6HVZ7_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 3.870e-8
Identity = 23/39 (58.97%), Postives = 31/39 (79.49%), Query Frame = 0
Query:    2 KKAYEVTMETHKAGKATVTQAWKSKAEGYCLKLQQCGLT 40
            K+A+++ METH  GKAT+T+ W+ KAE YCL LQ+ GLT
Sbjct:   75 KRAFDICMETHGIGKATITKVWRQKAEQYCLNLQRQGLT 113          
BLAST of mRNA_H-fluviatilis_contig100029.68.1 vs. uniprot
Match: A0A7R9Z3E7_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z3E7_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 5.820e-8
Identity = 23/39 (58.97%), Postives = 31/39 (79.49%), Query Frame = 0
Query:    2 KKAYEVTMETHKAGKATVTQAWKSKAEGYCLKLQQCGLT 40
            K+A+++ METH  GKAT+T+ W+ KAE YCL LQ+ GLT
Sbjct:   93 KRAFDICMETHGIGKATITKTWRQKAEQYCLNLQRQGLT 131          
BLAST of mRNA_H-fluviatilis_contig100029.68.1 vs. uniprot
Match: A0A6U6I937_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6I937_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 9.100e-8
Identity = 23/39 (58.97%), Postives = 31/39 (79.49%), Query Frame = 0
Query:    2 KKAYEVTMETHKAGKATVTQAWKSKAEGYCLKLQQCGLT 40
            K+A+++ METH  GKAT+T+ W+ KAE YCL LQ+ GLT
Sbjct:  129 KRAFDICMETHGIGKATITKVWRQKAEQYCLNLQRQGLT 167          
BLAST of mRNA_H-fluviatilis_contig100029.68.1 vs. uniprot
Match: A0A8J9TNB5_PHATR (Hypothetical protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9TNB5_PHATR)

HSP 1 Score: 48.5 bits (114), Expect = 2.900e-6
Identity = 21/39 (53.85%), Postives = 30/39 (76.92%), Query Frame = 0
Query:    2 KKAYEVTMETHKAGKATVTQAWKSKAEGYCLKLQQCGLT 40
            K A+E+ ++TH  GKAT+T+ WK +AE +CL LQ+ GLT
Sbjct:   43 KAAFEICVQTHGIGKATITKTWKKQAEQHCLGLQRQGLT 81          
BLAST of mRNA_H-fluviatilis_contig100029.68.1 vs. uniprot
Match: A0A1E7FBP7_9STRA (ClpS domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FBP7_9STRA)

HSP 1 Score: 49.7 bits (117), Expect = 3.610e-6
Identity = 22/39 (56.41%), Postives = 30/39 (76.92%), Query Frame = 0
Query:    2 KKAYEVTMETHKAGKATVTQAWKSKAEGYCLKLQQCGLT 40
            K ++E+ +ETH  GKATVT+ WK +AE +CL LQ+ GLT
Sbjct:  100 KASFEICVETHGVGKATVTKTWKKQAEQFCLGLQRQGLT 138          
BLAST of mRNA_H-fluviatilis_contig100029.68.1 vs. uniprot
Match: A0A1Z5JEC0_FISSO (ClpS domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JEC0_FISSO)

HSP 1 Score: 48.9 bits (115), Expect = 7.980e-6
Identity = 21/39 (53.85%), Postives = 30/39 (76.92%), Query Frame = 0
Query:    2 KKAYEVTMETHKAGKATVTQAWKSKAEGYCLKLQQCGLT 40
            K A+E+ ++TH  GKAT+T+ WK +AE +CL LQ+ GLT
Sbjct:  109 KAAFEICVQTHGIGKATITKTWKKQAEQFCLGLQRQGLT 147          
The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig100029.68.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D8LIY1_ECTSI9.220e-1790.00ClpS domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835ZHY3_9STRA7.300e-1687.50Ribosomal protein L7/L12, C-terminal/adaptor prote... [more]
A0A835ZBL6_9STRA1.290e-1587.50Ribosomal protein L7/L12, C-terminal/adaptor prote... [more]
A0A7S2EBD0_TRICV2.740e-864.10Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A6U6HVZ7_9STRA3.870e-858.97Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7R9Z3E7_9STRA5.820e-858.97Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A6U6I937_9STRA9.100e-858.97Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A8J9TNB5_PHATR2.900e-653.85Hypothetical protein (Fragment) n=2 Tax=Phaeodacty... [more]
A0A1E7FBP7_9STRA3.610e-656.41ClpS domain-containing protein n=1 Tax=Fragilariop... [more]
A0A1Z5JEC0_FISSO7.980e-653.85ClpS domain-containing protein n=1 Tax=Fistulifera... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003769Adaptor protein ClpS, corePFAMPF02617ClpScoord: 2..36
e-value: 2.6E-4
score: 20.7
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeSUPERFAMILY54736ClpS-likecoord: 2..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-fluviatilis_contig100029contigH-fluviatilis_contig100029:154..862 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Heribaudiella fluviatilis SAG_13_902021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-fluviatilis_contig100029.68.1mRNA_H-fluviatilis_contig100029.68.1Heribaudiella fluviatilis SAG_13_90mRNAH-fluviatilis_contig100029 136..862 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-fluviatilis_contig100029.68.1 ID=prot_H-fluviatilis_contig100029.68.1|Name=mRNA_H-fluviatilis_contig100029.68.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=40bp
MKKAYEVTMETHKAGKATVTQAWKSKAEGYCLKLQQCGLT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003769ClpS_core
IPR014719Ribosomal_L7/12_C/ClpS-like