prot_H-canaliculatus_M_contigs9995.2.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs9995.2.1
Unique Nameprot_H-canaliculatus_M_contigs9995.2.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length243
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs9995.2.1 vs. uniprot
Match: D7FWM3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWM3_ECTSI)

HSP 1 Score: 200 bits (509), Expect = 2.570e-55
Identity = 174/245 (71.02%), Postives = 186/245 (75.92%), Query Frame = 0 
Query:    1 GHGAGASELNPAALAHEAAAAGRLGQWDRVSPLVAKATRSPDLRGVAGARLYAALISAASACGKPRRGLEVFEEMLETSSSLSPSXXXXXXXXXXXXXXXXXXXXXRASLASSGDGVEWSDDVRGQGVDDSPSADEGGLARVDGGXXXXXXXXDTATFLAALDACAAVGGDESVSLAVGVTKQAAXXXXXXXXXXXXXXXX--AKARLSSRQLAAVLSKAAEVCAAAGKESTAAALAAKAAQLSG 243
            G G G  ELNP ALAHEAAAAGRLGQWDRVSPL+AKA RSPDLRGVAG RLYAALI+AA+ACGKPRRGLEVF+EM+E S S       XXXXXXXXXXXX       A+ A    GVEWSD + G+       A E   +R    XXXXXXXX   TFLAALDACAAVGG+ESV+LA+GVTK A XXXXXXXXXXXXXXXX   K RLSSRQLAAVLSKA EVCAA GKESTA ALAAKA QL G
Sbjct:  820 GGGGGVRELNPGALAHEAAAAGRLGQWDRVSPLLAKAMRSPDLRGVAGCRLYAALITAAAACGKPRRGLEVFQEMVEESRS------GXXXXXXXXXXXXVDAAVLGAAAAVVSGGVEWSDSMSGEDGTTGEVAMEEAFSRSGXXXXXXXXXXXXXTFLAALDACAAVGGEESVTLAIGVTKDAXXXXXXXXXXXXXXXXXDAKKPRLSSRQLAAVLSKAGEVCAAVGKESTAIALAAKAEQLVG 1058
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs9995.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FWM3_ECTSI2.570e-5571.02Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 51..79
e-value: 0.003
score: 15.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 117..152

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs9995contigH-canaliculatus_M_contigs9995:1796..2524 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs9995.2.1mRNA_H-canaliculatus_M_contigs9995.2.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs9995 1796..2524 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs9995.2.1 ID=prot_H-canaliculatus_M_contigs9995.2.1|Name=mRNA_H-canaliculatus_M_contigs9995.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=243bp
GHGAGASELNPAALAHEAAAAGRLGQWDRVSPLVAKATRSPDLRGVAGAR
LYAALISAASACGKPRRGLEVFEEMLETSSSLSPSSSGAAADGGGALGAA
AAAAAARASLASSGDGVEWSDDVRGQGVDDSPSADEGGLARVDGGGGRRL
PPPDTATFLAALDACAAVGGDESVSLAVGVTKQAAAAARELQERGGSGNG
GAKARLSSRQLAAVLSKAAEVCAAAGKESTAAALAAKAAQLSG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat