mRNA_H-canaliculatus_M_contigs9995.2.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs9995.2.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWM3_ECTSI) HSP 1 Score: 200 bits (509), Expect = 2.570e-55 Identity = 174/245 (71.02%), Postives = 186/245 (75.92%), Query Frame = 1 Query: 1 GHGAGASELNPAALAHEAAAAGRLGQWDRVSPLVAKATRSPDLRGVAGARLYAALISAASACGKPRRGLEVFEEMLETSSSLSPSXXXXXXXXXXXXXXXXXXXXXRASLASSGDGVEWSDDVRGQGVDDSPSADEGGLARVDGGXXXXXXXXDTATFLAALDACAAVGGDESVSLAVGVTKQAAXXXXXXXXXXXXXXXX--AKARLSSRQLAAVLSKAAEVCAAAGKESTAAALAAKAAQLSG 729
G G G ELNP ALAHEAAAAGRLGQWDRVSPL+AKA RSPDLRGVAG RLYAALI+AA+ACGKPRRGLEVF+EM+E S S XXXXXXXXXXXX A+ A GVEWSD + G+ A E +R XXXXXXXX TFLAALDACAAVGG+ESV+LA+GVTK A XXXXXXXXXXXXXXXX K RLSSRQLAAVLSKA EVCAA GKESTA ALAAKA QL G
Sbjct: 820 GGGGGVRELNPGALAHEAAAAGRLGQWDRVSPLLAKAMRSPDLRGVAGCRLYAALITAAAACGKPRRGLEVFQEMVEESRS------GXXXXXXXXXXXXVDAAVLGAAAAVVSGGVEWSDSMSGEDGTTGEVAMEEAFSRSGXXXXXXXXXXXXXTFLAALDACAAVGGEESVTLAIGVTKDAXXXXXXXXXXXXXXXXXDAKKPRLSSRQLAAVLSKAGEVCAAVGKESTAIALAAKAEQLVG 1058 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs9995.2.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 1 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs9995.2.1 >prot_H-canaliculatus_M_contigs9995.2.1 ID=prot_H-canaliculatus_M_contigs9995.2.1|Name=mRNA_H-canaliculatus_M_contigs9995.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=243bp GHGAGASELNPAALAHEAAAAGRLGQWDRVSPLVAKATRSPDLRGVAGARback to top mRNA from alignment at H-canaliculatus_M_contigs9995:1796..2524+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs9995.2.1 ID=mRNA_H-canaliculatus_M_contigs9995.2.1|Name=mRNA_H-canaliculatus_M_contigs9995.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=729bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs9995:1796..2524+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs9995:1796..2524+ >mRNA_H-canaliculatus_M_contigs9995.2.1 ID=mRNA_H-canaliculatus_M_contigs9995.2.1|Name=mRNA_H-canaliculatus_M_contigs9995.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=729bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs9995:1796..2524+ (Hapterophycus canaliculatus Oshoro7m male)back to top |