mRNA_H-canaliculatus_M_contigs78141.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs78141.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A356F7B9_9BACT) HSP 1 Score: 139 bits (350), Expect = 3.940e-35 Identity = 67/162 (41.36%), Postives = 95/162 (58.64%), Query Frame = 1
Query: 1 STQQELIKDYVRDFEAAILSSNPMDEQTGYRIYIEESSWIDMHILDLFSMDADMLRLSNYFFKDKGLRLVNGPVWDSDRSLNSTDERDDDPDILVPDRRQIDPFDFSWWEKLFEIDHFDEKYRRRWHELRQGPLATNALLARVDDMANPLFEPYPREHDRWG 486
S Q I++Y F A+ +N D GY YI++ SW D H+L++ + + D LRLS YF+KD+ + GP+WD DRS+NSTD RDD+P D F++ WW +LF+ F + YR RWHE RQGPL+ + +D M+ L E PR+ +WG
Sbjct: 657 SAQTTWIRNYFNAFGDALNGANFRDPVRGYAPYIDKLSWADHHMLNVLAKNVDALRLSTYFYKDRNGPIEFGPIWDFDRSMNSTDGRDDNPTTWNGTGDGTDFFNYPWWGRLFDDPDFMQLYRDRWHEFRQGPLSNTNIRNVIDTMSGQLQEAQPRDSAKWG 818
BLAST of mRNA_H-canaliculatus_M_contigs78141.1.1 vs.
Match: LTD (domain-containing protein n=5 Tax=cellular organisms TaxID=131567 RepID=A0A424I427_9BACT) HSP 1 Score: 137 bits (344), Expect = 2.600e-34 Identity = 69/163 (42.33%), Postives = 97/163 (59.51%), Query Frame = 1
Query: 1 STQQELIKDYVRDFEAAILSSNPMDEQTGYRIYIEESSWIDMHILDLFSMDADMLRLSNYFFKDKGLRLVNGPVWDSDRSLNSTDERDDDPDILVPDRRQIDPFDFSWWEKLFEIDHFDEKYRRRWHELRQGPLATNALLARVDDMANPLFEPYPREHDRWGE 489
S+Q I+DY+ AA+ + + D TGY YI+ SWID H+L++ +++AD LRLS YF K +G ++ GP+WD DRS++STD RDD+P F F WW +LF ++F +KY R+ ELR GP AT + A +D MA L E R RW +
Sbjct: 655 SSQASWIRDYINAMNAALEAPDYADPVTGYARYIDVDSWIDHHLLNVLTLNADALRLSTYFHKKRGGKIEYGPIWDFDRSMDSTDSRDDNPSSWSGGTNY---FTFPWWNRLFTDENFWQKYIDRYFELRTGPFATANVHAIIDQMAATLNEAQSRNFQRWSD 814
BLAST of mRNA_H-canaliculatus_M_contigs78141.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Roseibacillus sp. TaxID=2024856 RepID=A0A2E3NAK1_9BACT) HSP 1 Score: 135 bits (341), Expect = 6.580e-34 Identity = 68/163 (41.72%), Postives = 97/163 (59.51%), Query Frame = 1
Query: 1 STQQELIKDYVRDFEAAILSSNPMDEQTGYRIYIEESSWIDMHILDLFSMDADMLRLSNYFFKDKGLRLVNGPVWDSDRSLNSTDERDDDPDILVPDRRQIDPFDFSWWEKLFEIDHFDEKYRRRWHELRQGPLATNALLARVDDMANPLFEPYPREHDRWGE 489
S+Q I+DY+ AA+ + + D TGY YI+ SWID H+L++ +++AD LRLS YF K + ++ GP+WD DRS++STD RDD+P F F WW +LF ++F +KY R+ ELR GP AT+ + A +D MA L E R RW +
Sbjct: 655 SSQASWIRDYINAMNAALEAPDYADPVTGYARYIDVDSWIDHHLLNVLTLNADALRLSTYFHKKREGKIEYGPIWDFDRSMDSTDSRDDNPSSWSGGTNY---FTFPWWNRLFSDENFWQKYIDRYFELRDGPFATSNVHAIIDQMAATLNEAQTRNFQRWSD 814
BLAST of mRNA_H-canaliculatus_M_contigs78141.1.1 vs.
Match: LTD (domain-containing protein (Fragment) n=1 Tax=Roseibacillus sp. TaxID=2024856 RepID=A0A2E8M3I7_9BACT) HSP 1 Score: 135 bits (339), Expect = 1.130e-33 Identity = 68/163 (41.72%), Postives = 96/163 (58.90%), Query Frame = 1
Query: 1 STQQELIKDYVRDFEAAILSSNPMDEQTGYRIYIEESSWIDMHILDLFSMDADMLRLSNYFFKDKGLRLVNGPVWDSDRSLNSTDERDDDPDILVPDRRQIDPFDFSWWEKLFEIDHFDEKYRRRWHELRQGPLATNALLARVDDMANPLFEPYPREHDRWGE 489
S+Q I+DY+ AA+ + + D TGY YI+ SWID H+L++ +++AD LRLS YF K +G ++ GP+WD DRS++STD RDD+P F F WW +LF +F ++Y R+ ELR GP AT + A +D MA L E R RW +
Sbjct: 657 SSQASWIRDYINAMNAALEAPDYADPVTGYARYIDVDSWIDHHLLNVLTLNADALRLSTYFHKKRGGKIEYGPIWDFDRSMDSTDSRDDNPSSWSGGTNY---FTFPWWNRLFTDKNFWQRYIDRYFELRNGPFATANVHAIIDQMAATLNEAQARNFQRWSD 816
BLAST of mRNA_H-canaliculatus_M_contigs78141.1.1 vs.
Match: LTD (domain-containing protein (Fragment) n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A355S8P4_9BACT) HSP 1 Score: 135 bits (339), Expect = 1.160e-33 Identity = 68/163 (41.72%), Postives = 96/163 (58.90%), Query Frame = 1
Query: 1 STQQELIKDYVRDFEAAILSSNPMDEQTGYRIYIEESSWIDMHILDLFSMDADMLRLSNYFFKDKGLRLVNGPVWDSDRSLNSTDERDDDPDILVPDRRQIDPFDFSWWEKLFEIDHFDEKYRRRWHELRQGPLATNALLARVDDMANPLFEPYPREHDRWGE 489
S+Q I+DY+ AA+ + + D TGY YI+ SWID H+L++ +++AD LRLS YF K +G ++ GP+WD DRS++STD RDD+P F F WW +LF +F ++Y R+ ELR GP AT + A +D MA L E R RW +
Sbjct: 306 SSQASWIRDYINAMNAALEAPDYADPVTGYARYIDVDSWIDHHLLNVLTLNADALRLSTYFHKKRGGKIEYGPIWDFDRSMDSTDSRDDNPSSWSGGTNY---FTFPWWNRLFTDKNFWQRYIDRYFELRNGPFATANVHAIIDQMAATLNEAQARNFQRWSD 465
BLAST of mRNA_H-canaliculatus_M_contigs78141.1.1 vs.
Match: LTD (domain-containing protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V6PGK7_9BACT) HSP 1 Score: 132 bits (333), Expect = 2.750e-33 Identity = 65/162 (40.12%), Postives = 98/162 (60.49%), Query Frame = 1
Query: 7 QQELIKDYVRDFEAAILSSNPMDEQTGYRIYIEESSWIDMHILDLFSMDADMLRLSNYFFKDKGLRLVNGPVWDSDRSLNSTDERDDDPDILVPDRRQI--DPFDFSWWEKLFEIDHFDEKYRRRWHELRQGPLATNALLARVDDMANPLFEPYPREHDRWG 486
QQ+ ++DY+ F A+ SS+P+ TGY Y+ SWID HIL++ + + D LRLS YF+K++ +L GP+WD DRSL+STD RD +P + + + D F+++WW LF F +K+ RW + R + + A +D MAN + + PRE RWG
Sbjct: 92 QQQYLQDYLDAFGNALFSSDPL---TGYPAYLNVDSWIDHHILNVLAFNVDALRLSAYFYKERNGKLSFGPIWDFDRSLDSTDGRDSNPRVWRAQSQDLGTDFFNYTWWGDLFNDIDFWQKWIDRWEDFRLSQFSLTNMNALIDSMANTVRQEQPREQSRWG 250
BLAST of mRNA_H-canaliculatus_M_contigs78141.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V6FBV1_9BACT) HSP 1 Score: 132 bits (333), Expect = 7.730e-33 Identity = 65/162 (40.12%), Postives = 98/162 (60.49%), Query Frame = 1
Query: 7 QQELIKDYVRDFEAAILSSNPMDEQTGYRIYIEESSWIDMHILDLFSMDADMLRLSNYFFKDKGLRLVNGPVWDSDRSLNSTDERDDDPDILVPDRRQI--DPFDFSWWEKLFEIDHFDEKYRRRWHELRQGPLATNALLARVDDMANPLFEPYPREHDRWG 486
QQ+ ++DY+ F A+ SS+P+ TGY Y+ SWID HIL++ + + D LRLS YF+K++ +L GP+WD DRSL+STD RD +P + + + D F+++WW LF F +K+ RW + R + + A +D MAN + + PRE RWG
Sbjct: 510 QQQYLQDYLDAFGNALFSSDPL---TGYPAYLNVDSWIDHHILNVLAFNVDALRLSAYFYKERNGKLSFGPIWDFDRSLDSTDGRDSNPRVWRAQSQDLGTDFFNYTWWGDLFNDIDFWQKWIDRWEDFRLSQFSLTNMNALIDSMANTVRQEQPREQSRWG 668
BLAST of mRNA_H-canaliculatus_M_contigs78141.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Verrucomicrobiaceae bacterium TaxID=2026800 RepID=A0A2E5XFU7_9BACT) HSP 1 Score: 132 bits (332), Expect = 1.070e-32 Identity = 64/160 (40.00%), Postives = 94/160 (58.75%), Query Frame = 1
Query: 4 TQQELIKDYVRDFEAAILSSNPMDEQTGYRIYIEESSWIDMHILDLFSMDADMLRLSNYFFKDKGLRLVNGPVWDSDRSLNSTDERDDDPDILVPDRRQIDPFDFSWWEKLFEIDHFDEKYRRRWHELRQGPLATNALLARVDDMANPLFEPYPREHDRW 483
+Q + I++Y+ + + N D GY Y++ SWID H+L++ +++AD LRLS YFFK +G ++ GP+WD DRS+ STD RDD+P F + WW +LF ++F +KY R+ ELR GP AT ++ A +D MA L E R RW
Sbjct: 657 SQADWIRNYLNEMNTTLDGPNFTDPVNGYARYLDVDSWIDHHLLNVLTLNADALRLSTYFFKTRGGKIEYGPIWDFDRSMESTDSRDDNPSTWAGGTNY---FTYPWWNRLFADENFWQKYIDRYFELRDGPFATPSVHAIIDRMAATLDESQVRNFQRW 813
BLAST of mRNA_H-canaliculatus_M_contigs78141.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V5TVT9_9BACT) HSP 1 Score: 132 bits (331), Expect = 1.380e-32 Identity = 63/162 (38.89%), Postives = 102/162 (62.96%), Query Frame = 1
Query: 7 QQELIKDYVRDFEAAILSSNPMDEQTGYRIYIEESSWIDMHILDLFSMDADMLRLSNYFFKDKGLRLVNGPVWDSDRSLNSTDERDDDPDILVPDRRQI--DPFDFSWWEKLFEIDHFDEKYRRRWHELRQGPLATNALLARVDDMANPLFEPYPREHDRWG 486
QQ+ +++Y+ +F A+L+S+P+ +GY Y++ SWID HIL++ + + D LRLS YF+K++ +L GP+WD DRSL+STD RD +P + + + D F++ WW +LF F +K+ RW +LR + + A +D +AN + + PRE RWG
Sbjct: 38 QQQYLQNYMDEFGNALLNSDPL---SGYPAYVDVDSWIDHHILNVMAFNVDALRLSAYFYKERNGKLFFGPIWDFDRSLDSTDGRDANPRVWRSQTQDLGTDFFNYPWWGELFNDIDFWQKWIDRWEDLRLSQFSLTNMNALIDSLANTVRQEQPREKSRWG 196
BLAST of mRNA_H-canaliculatus_M_contigs78141.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Roseibacillus sp. TaxID=2024856 RepID=A0A2E6SAL7_9BACT) HSP 1 Score: 129 bits (323), Expect = 1.730e-31 Identity = 65/161 (40.37%), Postives = 93/161 (57.76%), Query Frame = 1
Query: 1 STQQELIKDYVRDFEAAILSSNPMDEQTGYRIYIEESSWIDMHILDLFSMDADMLRLSNYFFKDKGLRLVNGPVWDSDRSLNSTDERDDDPDILVPDRRQIDPFDFSWWEKLFEIDHFDEKYRRRWHELRQGPLATNALLARVDDMANPLFEPYPREHDRW 483
S Q I+DY+ + A+ + + D GY YI+ SWID H+L++ +++AD LRLS YFFK + ++ GP+WD DRS+ STD RDD+P F + WW +LF ++F +KY R+ ELR GP +T + A +D MA L E R RW
Sbjct: 656 SAQANWIRDYLDNMNDALNAPDFADPVNGYARYIDVDSWIDHHLLNVLTLNADALRLSTYFFKRRAGKIEYGPIWDFDRSMESTDSRDDNPSTWAGGTNY---FTYPWWNRLFADENFWQKYIDRYFELRSGPFSTPNVHAIIDRMAATLDESQVRNFQRW 813 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs78141.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs78141.1.1 >prot_H-canaliculatus_M_contigs78141.1.1 ID=prot_H-canaliculatus_M_contigs78141.1.1|Name=mRNA_H-canaliculatus_M_contigs78141.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=163bp STQQELIKDYVRDFEAAILSSNPMDEQTGYRIYIEESSWIDMHILDLFSMback to top mRNA from alignment at H-canaliculatus_M_contigs78141:11..499- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs78141.1.1 ID=mRNA_H-canaliculatus_M_contigs78141.1.1|Name=mRNA_H-canaliculatus_M_contigs78141.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=489bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs78141:11..499- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs78141:11..499- >mRNA_H-canaliculatus_M_contigs78141.1.1 ID=mRNA_H-canaliculatus_M_contigs78141.1.1|Name=mRNA_H-canaliculatus_M_contigs78141.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=489bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs78141:11..499- (Hapterophycus canaliculatus Oshoro7m male)back to top |