mRNA_H-canaliculatus_M_contigs78133.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs78133.1.1 vs.
Match: Dehydrogenase ((Fragment) n=1 Tax=Sulfitobacter sp. TaxID=1903071 RepID=A0A3D2F9C2_9RHOB) HSP 1 Score: 315 bits (806), Expect = 5.420e-101 Identity = 141/167 (84.43%), Postives = 148/167 (88.62%), Query Frame = 1
Query: 1 DMFPWDLARFGDWATNGQTGKTFTKERVRDQYANRFKIHFPNEERAAGRPVRMRPAYDLQKSMGAAMGLNYGWEHPLWFADTPGATDTDGFTRQNWWGPVGEECKMLRDRAGIIDISNFAKYTCKGAGAEDWLNAVFANTMPKTVGRSCLTPLIGKRGGIAGDFTVT 501
DMFPWD+ARFG WAT+G GK FTKERVRDQYANRFKIHFPNEER+AGR VR RP Y QK MGA MGLN+GWEHPLWFADTP DTDGFTRQNWWGPVGEECKMLR AGIIDISNFAKY CKGAGA DWLN+VFAN MPK++GRSCLTPLIGKRGGIAGDFTVT
Sbjct: 373 DMFPWDMARFGSWATDGAKGKAFTKERVRDQYANRFKIHFPNEERSAGRAVRTRPVYQRQKDMGAVMGLNFGWEHPLWFADTPDTKDTDGFTRQNWWGPVGEECKMLRANAGIIDISNFAKYRCKGAGASDWLNSVFANNMPKSIGRSCLTPLIGKRGGIAGDFTVT 539
BLAST of mRNA_H-canaliculatus_M_contigs78133.1.1 vs.
Match: 4-methylaminobutanoate (oxidase (Formaldehyde-forming) n=1 Tax=Ascidiaceihabitans donghaensis TaxID=1510460 RepID=A0A2R8BE83_9RHOB) HSP 1 Score: 313 bits (803), Expect = 8.300e-100 Identity = 142/167 (85.03%), Postives = 147/167 (88.02%), Query Frame = 1
Query: 1 DMFPWDLARFGDWATNGQTGKTFTKERVRDQYANRFKIHFPNEERAAGRPVRMRPAYDLQKSMGAAMGLNYGWEHPLWFADTPGATDTDGFTRQNWWGPVGEECKMLRDRAGIIDISNFAKYTCKGAGAEDWLNAVFANTMPKTVGRSCLTPLIGKRGGIAGDFTVT 501
DMFPWD+ARFG WAT G GKTFTKERVRDQYANRFKIHFPNEER AGR VR RP +DLQ MGA MGLNYGWEHPLW+ADTPGA+DTDGFTRQNWW PVG ECKMLRDRAGIIDISNFAKY CKG AE WLNAVFAN MPK +GRSCLTPLIG RGGIAGDFTVT
Sbjct: 373 DMFPWDMARFGAWATQGAAGKTFTKERVRDQYANRFKIHFPNEERGAGRAVRTRPVHDLQLEMGAVMGLNYGWEHPLWYADTPGASDTDGFTRQNWWDPVGAECKMLRDRAGIIDISNFAKYRCKGPDAETWLNAVFANVMPKAIGRSCLTPLIGVRGGIAGDFTVT 539
BLAST of mRNA_H-canaliculatus_M_contigs78133.1.1 vs.
Match: Glycine (cleavage T-protein (Aminomethyl transferase) n=3 Tax=Roseobacteraceae TaxID=2854170 RepID=B7RFV5_ROSS0) HSP 1 Score: 301 bits (772), Expect = 2.850e-95 Identity = 137/167 (82.04%), Postives = 144/167 (86.23%), Query Frame = 1
Query: 1 DMFPWDLARFGDWATNGQTGKTFTKERVRDQYANRFKIHFPNEERAAGRPVRMRPAYDLQKSMGAAMGLNYGWEHPLWFADTPGATDTDGFTRQNWWGPVGEECKMLRDRAGIIDISNFAKYTCKGAGAEDWLNAVFANTMPKTVGRSCLTPLIGKRGGIAGDFTVT 501
DMF WD+ARFGDWA FTK RVRDQYANRFKIHFPNEERAAGRPVR RP Y+ QK MGA GLNYGWEHPLWFADTPG DTDGFTRQNWWGPVGEEC+MLR++AGIIDISNFAKY C G GAEDWLN++FANTMPK VGRSCLTPLIG RGGIAGDFTVT
Sbjct: 373 DMFAWDMARFGDWAD-----AAFTKARVRDQYANRFKIHFPNEERAAGRPVRTRPVYETQKQMGAVFGLNYGWEHPLWFADTPGTADTDGFTRQNWWGPVGEECRMLREKAGIIDISNFAKYRCAGPGAEDWLNSLFANTMPKAVGRSCLTPLIGVRGGIAGDFTVT 534
BLAST of mRNA_H-canaliculatus_M_contigs78133.1.1 vs.
Match: FAD-dependent (oxidoreductase n=3 Tax=Ruegeria TaxID=97050 RepID=UPI001489C100) HSP 1 Score: 297 bits (761), Expect = 1.190e-93 Identity = 137/167 (82.04%), Postives = 144/167 (86.23%), Query Frame = 1
Query: 1 DMFPWDLARFGDWATNGQTGKTFTKERVRDQYANRFKIHFPNEERAAGRPVRMRPAYDLQKSMGAAMGLNYGWEHPLWFADTPGATDTDGFTRQNWWGPVGEECKMLRDRAGIIDISNFAKYTCKGAGAEDWLNAVFANTMPKTVGRSCLTPLIGKRGGIAGDFTVT 501
DMF WDLARF WAT K FTK RV+DQYA+RF IHFPNEER+AGRP R RP Y+ QK+MGA GLN GWEHPLWFADTPGA +T+GFTRQNWWGPVGEECKMLRDRAGIIDISNFAKY CKG GA DWLNAVFANTMPKTVGRSCLTPLI KRGGIAGDFTVT
Sbjct: 373 DMFAWDLARFDSWAT-----KDFTKARVQDQYAHRFAIHFPNEERSAGRPARTRPVYETQKAMGAVFGLNAGWEHPLWFADTPGAVETNGFTRQNWWGPVGEECKMLRDRAGIIDISNFAKYVCKGPGASDWLNAVFANTMPKTVGRSCLTPLISKRGGIAGDFTVT 534
BLAST of mRNA_H-canaliculatus_M_contigs78133.1.1 vs.
Match: Dehydrogenase ((Fragment) n=1 Tax=Rhodobacteraceae bacterium TaxID=1904441 RepID=A0A2A4NSQ6_9RHOB) HSP 1 Score: 291 bits (744), Expect = 2.800e-93 Identity = 131/167 (78.44%), Postives = 143/167 (85.63%), Query Frame = 1
Query: 1 DMFPWDLARFGDWATNGQTGKTFTKERVRDQYANRFKIHFPNEERAAGRPVRMRPAYDLQKSMGAAMGLNYGWEHPLWFADTPGATDTDGFTRQNWWGPVGEECKMLRDRAGIIDISNFAKYTCKGAGAEDWLNAVFANTMPKTVGRSCLTPLIGKRGGIAGDFTVT 501
DMF WD+ARFGDWA K FTK RVRD YA+RF IHFPNEERAAGRPVR RP +D+QK MGA MGL+YGWEHPLWFAD+PG DT+GFTRQNWWGPVG+EC+MLRD AGIIDISNFAKY CKG GA WL+A+FAN MP+ VGRSCLTPLIGKRGGIAGDFTVT
Sbjct: 153 DMFAWDMARFGDWAD-----KAFTKARVRDSYAHRFSIHFPNEERAAGRPVRTRPVHDIQKDMGAVMGLSYGWEHPLWFADSPGVVDTNGFTRQNWWGPVGDECRMLRDHAGIIDISNFAKYRCKGPGAGAWLDAIFANNMPREVGRSCLTPLIGKRGGIAGDFTVT 314
BLAST of mRNA_H-canaliculatus_M_contigs78133.1.1 vs.
Match: Dimethylglycine (dehydrogenase n=2 Tax=Shimia TaxID=573139 RepID=A0A1M6HHS0_9RHOB) HSP 1 Score: 296 bits (758), Expect = 3.370e-93 Identity = 135/167 (80.84%), Postives = 144/167 (86.23%), Query Frame = 1
Query: 1 DMFPWDLARFGDWATNGQTGKTFTKERVRDQYANRFKIHFPNEERAAGRPVRMRPAYDLQKSMGAAMGLNYGWEHPLWFADTPGATDTDGFTRQNWWGPVGEECKMLRDRAGIIDISNFAKYTCKGAGAEDWLNAVFANTMPKTVGRSCLTPLIGKRGGIAGDFTVT 501
DMFPWD+ARFG WA N + F K RVRD Y++RF IHFPNEERAAGRP+R RP Y+ QK+MGA GLNYGWEHPLWFAD PG DT+GFTRQNWWGPVGEECKMLR+RAGIIDISNFAKY CKG GAE WLNAVFANTMPK VGRSCLTPLIGKRGGIAGDFTVT
Sbjct: 373 DMFPWDVARFGAWANNPE----FVKARVRDVYSHRFAIHFPNEERAAGRPLRTRPIYETQKAMGAVFGLNYGWEHPLWFADKPGVVDTNGFTRQNWWGPVGEECKMLRERAGIIDISNFAKYICKGPGAEGWLNAVFANTMPKAVGRSCLTPLIGKRGGIAGDFTVT 535
BLAST of mRNA_H-canaliculatus_M_contigs78133.1.1 vs.
Match: GcvT (family protein n=2 Tax=Rhodobacterales TaxID=204455 RepID=A0A8J7IHF7_9RHOB) HSP 1 Score: 294 bits (753), Expect = 1.800e-92 Identity = 136/167 (81.44%), Postives = 143/167 (85.63%), Query Frame = 1
Query: 1 DMFPWDLARFGDWATNGQTGKTFTKERVRDQYANRFKIHFPNEERAAGRPVRMRPAYDLQKSMGAAMGLNYGWEHPLWFADTPGATDTDGFTRQNWWGPVGEECKMLRDRAGIIDISNFAKYTCKGAGAEDWLNAVFANTMPKTVGRSCLTPLIGKRGGIAGDFTVT 501
DMF WD+ARFGDWA K FTK RV DQYA+RF IHFPNEERAAGRPVR RP +D+QK MGA MGLNYGWEHPLWFADTP A DT+GFTRQNWW PVG EC+MLRDRAGIIDISNFAKYTCKG GAEDWLNAVFAN +P VGRSCLTPLIG RGGIAGDFTVT
Sbjct: 373 DMFAWDIARFGDWAD-----KAFTKARVGDQYAHRFAIHFPNEERAAGRPVRTRPVHDMQKRMGAVMGLNYGWEHPLWFADTPDAQDTNGFTRQNWWAPVGAECRMLRDRAGIIDISNFAKYTCKGPGAEDWLNAVFANRIPTQVGRSCLTPLIGVRGGIAGDFTVT 534
BLAST of mRNA_H-canaliculatus_M_contigs78133.1.1 vs.
Match: FAD-dependent (oxidoreductase n=1 Tax=Tateyamaria pelophila TaxID=328415 RepID=UPI001CBEF0F3) HSP 1 Score: 294 bits (752), Expect = 2.530e-92 Identity = 136/167 (81.44%), Postives = 141/167 (84.43%), Query Frame = 1
Query: 1 DMFPWDLARFGDWATNGQTGKTFTKERVRDQYANRFKIHFPNEERAAGRPVRMRPAYDLQKSMGAAMGLNYGWEHPLWFADTPGATDTDGFTRQNWWGPVGEECKMLRDRAGIIDISNFAKYTCKGAGAEDWLNAVFANTMPKTVGRSCLTPLIGKRGGIAGDFTVT 501
DMF WD+ARFG WA+ K FTK RV DQYANRFKIHFPNEER+AGRPVR RP Y Q+ MGA MGLNYGWEHPLWFAD PGA DTDGFTRQNWWGPVG ECKMLR R GIIDISNFAKY C G GAEDWLNAVFAN MP+ VGRSCLTPLIGKRGGIAGDFTVT
Sbjct: 373 DMFAWDMARFGTWAS-----KAFTKARVGDQYANRFKIHFPNEERSAGRPVRTRPIYARQREMGAVMGLNYGWEHPLWFADAPGAEDTDGFTRQNWWGPVGGECKMLRARGGIIDISNFAKYVCTGPGAEDWLNAVFANRMPRLVGRSCLTPLIGKRGGIAGDFTVT 534
BLAST of mRNA_H-canaliculatus_M_contigs78133.1.1 vs.
Match: Dimethylglycine (dehydrogenase n=1 Tax=Phaeobacter gallaeciensis DSM 26640 TaxID=1423144 RepID=V9WNZ0_9RHOB) HSP 1 Score: 289 bits (739), Expect = 4.550e-92 Identity = 134/167 (80.24%), Postives = 140/167 (83.83%), Query Frame = 1
Query: 1 DMFPWDLARFGDWATNGQTGKTFTKERVRDQYANRFKIHFPNEERAAGRPVRMRPAYDLQKSMGAAMGLNYGWEHPLWFADTPGATDTDGFTRQNWWGPVGEECKMLRDRAGIIDISNFAKYTCKGAGAEDWLNAVFANTMPKTVGRSCLTPLIGKRGGIAGDFTVT 501
DMF WD+ARFG WAT K FTK RV+DQYA+RF IHFPNEER+AGRP R RP Y LQ MGA GLN GWEHPLWFADTPGA DT+GFTRQNWWGPVGEEC+MLR RAGIIDISNFAKY C G GAE WLNAVFANTMPK VGRSCLTPLI KRGGIAGDFTVT
Sbjct: 373 DMFAWDIARFGSWAT-----KEFTKARVKDQYAHRFAIHFPNEERSAGRPARTRPIYALQAEMGAVFGLNAGWEHPLWFADTPGAKDTNGFTRQNWWGPVGEECRMLRSRAGIIDISNFAKYRCAGPGAEAWLNAVFANTMPKAVGRSCLTPLISKRGGIAGDFTVT 534
BLAST of mRNA_H-canaliculatus_M_contigs78133.1.1 vs.
Match: FAD-dependent (oxidoreductase n=1 Tax=Seohaeicola saemankumensis TaxID=481181 RepID=UPI001CD2D252) HSP 1 Score: 292 bits (747), Expect = 1.380e-91 Identity = 133/167 (79.64%), Postives = 143/167 (85.63%), Query Frame = 1
Query: 1 DMFPWDLARFGDWATNGQTGKTFTKERVRDQYANRFKIHFPNEERAAGRPVRMRPAYDLQKSMGAAMGLNYGWEHPLWFADTPGATDTDGFTRQNWWGPVGEECKMLRDRAGIIDISNFAKYTCKGAGAEDWLNAVFANTMPKTVGRSCLTPLIGKRGGIAGDFTVT 501
DMF WD+ARFGDWA K FT+ RVRDQYA+RF IHFPNEERAAGRPVR+RPAY+ Q+ MGA GLNYGWEHPLWFAD PG +T+GFTRQNWWGPVG EC+MLRDRAGIIDISNFAKY G GAEDWLNAVFAN MP+ VGRSCLTPLIGKRGGIAGDFTVT
Sbjct: 373 DMFAWDMARFGDWAD-----KAFTRARVRDQYAHRFAIHFPNEERAAGRPVRLRPAYETQREMGAVFGLNYGWEHPLWFADAPGVEETNGFTRQNWWGPVGAECRMLRDRAGIIDISNFAKYRVAGPGAEDWLNAVFANHMPRAVGRSCLTPLIGKRGGIAGDFTVT 534 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs78133.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs78133.1.1 >prot_H-canaliculatus_M_contigs78133.1.1 ID=prot_H-canaliculatus_M_contigs78133.1.1|Name=mRNA_H-canaliculatus_M_contigs78133.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=166bp MFPWDLARFGDWATNGQTGKTFTKERVRDQYANRFKIHFPNEERAAGRPVback to top mRNA from alignment at H-canaliculatus_M_contigs78133:2..502+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs78133.1.1 ID=mRNA_H-canaliculatus_M_contigs78133.1.1|Name=mRNA_H-canaliculatus_M_contigs78133.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=501bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs78133:2..502+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs78133:2..502+ >mRNA_H-canaliculatus_M_contigs78133.1.1 ID=mRNA_H-canaliculatus_M_contigs78133.1.1|Name=mRNA_H-canaliculatus_M_contigs78133.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=498bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs78133:2..502+ (Hapterophycus canaliculatus Oshoro7m male)back to top |