mRNA_H-canaliculatus_M_contigs778.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs778.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G218_ECTSI) HSP 1 Score: 160 bits (405), Expect = 5.650e-47 Identity = 74/127 (58.27%), Postives = 93/127 (73.23%), Query Frame = 1
Query: 1 MKAASASLEASMRRLHGENAILVVRNTPPGHGHCAERMFAAPIDFRAAARLVSESPEEYGWNTFDLRNEILEKSFTGSGSSWKLLDAYTPTLLRADSHRTLEDCLHYCLPGPLDLWASLLYNLLVAE 381
MK+AS SL +SMRRLHG+NAILVVRNT PGHG +RMF P+D A LV++ P Y W TF RN++LE++F + W LLDAY+PT+LRAD H + ED LHYCLPGP+D W LLYN+L+ +
Sbjct: 105 MKSASESLTSSMRRLHGDNAILVVRNTVPGHGESFDRMFGGPVDLDTALDLVAKGPPMYKWTTFGDRNKLLEEAFEATHGGWTLLDAYSPTILRADFHASEEDGLHYCLPGPIDHWVVLLYNILLEK 231
BLAST of mRNA_H-canaliculatus_M_contigs778.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7J3_9PHAE) HSP 1 Score: 161 bits (407), Expect = 4.840e-45 Identity = 74/127 (58.27%), Postives = 91/127 (71.65%), Query Frame = 1
Query: 1 MKAASASLEASMRRLHGENAILVVRNTPPGHGHCAERMFAAPIDFRAAARLVSESPEEYGWNTFDLRNEILEKSFTGSGSSWKLLDAYTPTLLRADSHRTLEDCLHYCLPGPLDLWASLLYNLLVAE 381
MK AS SL SMRRLHG+NAILVVRNT PGHG +RMF P+D A LV++ P Y W TF RN++LE++F + W LLDAY+PT+LRADSH + D LHYCLPGP+D W LLYN+L+ +
Sbjct: 323 MKNASESLTTSMRRLHGDNAILVVRNTVPGHGESFDRMFGGPVDLDTALDLVAKGPPRYKWTTFGDRNKLLEEAFEATNGGWTLLDAYSPTILRADSHASATDGLHYCLPGPIDHWVVLLYNILLEK 449
BLAST of mRNA_H-canaliculatus_M_contigs778.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT34_ECTSI) HSP 1 Score: 146 bits (368), Expect = 9.700e-43 Identity = 71/129 (55.04%), Postives = 93/129 (72.09%), Query Frame = 1
Query: 1 MKAASASLEASMRRLHGEN-AILVVRNTPPGHGHCAERMFAAPIDFRAAARLVSESPEEYGWNTFDLRNEILEKSFTGSGSSWKLLDAYTPTLLRADSHRTLEDCLHYCLPGPLDLWASLLYNLLVAEN 384
M+A++ +L +SM+RLHGE+ AILVVRNT PGH C ERMF P++ A++LV+E+P Y WN+F+ RN L+K+F+ WKLLDAY+PTLLR DSH DCLHYC+P P D WA LL N+L+
Sbjct: 1 MEASAKALTSSMKRLHGEDKAILVVRNTVPGHWGCTERMFDGPVNKIIASKLVAEAPGSYEWNSFESRNVQLQKAFSPD-RGWKLLDAYSPTLLRPDSHIANNDCLHYCMPDPADHWARLLCNILLVAK 128
BLAST of mRNA_H-canaliculatus_M_contigs778.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9U7_9PHAE) HSP 1 Score: 145 bits (366), Expect = 2.140e-42 Identity = 70/133 (52.63%), Postives = 91/133 (68.42%), Query Frame = 1
Query: 1 MKAASASLEASMRRLHGENAILVVRNTPPGHG-HCAERMFAAPIDFRAAARLVSESPEEYGWNTFDLRNEILEKSFTGSGSS-WKLLDAYTPTLLRADSHRTLE---DCLHYCLPGPLDLWASLLYNLLVAEN 384
M+ AS + ASM+RLHG++A+L+VRNTPPGHG C ER F P+D A LV+ P +Y W F N ILE++F G+ + WK LDAYTPTLLR D H + DCLHYC+PGP+D W LLY++L+A+
Sbjct: 1 METASKEITASMKRLHGDDALLIVRNTPPGHGVTCTERTFDGPVDVDTAIDLVASGPHQYQWGRFPEYNAILEEAFLGNATDGWKELDAYTPTLLRPDFHLGGDENPDCLHYCIPGPIDHWVRLLYSMLLAKG 133
BLAST of mRNA_H-canaliculatus_M_contigs778.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFW9_9PHAE) HSP 1 Score: 152 bits (383), Expect = 6.730e-42 Identity = 76/130 (58.46%), Postives = 98/130 (75.38%), Query Frame = 1
Query: 1 MKAASASLEASMRRLHGEN-AILVVRNTPPGHGHCAERMFAAPIDFRAAARLVSESPEEYGWNTFDLRNEILEKSFTGSGSSWKLLDAYTPTLLRADSHRTLEDCLHYCLPGPLDLWASLLYN-LLVAEN 384
M+A++ +L +SM+RLHGE+ AILVVRNT PGH C ERMF AP++ A +LV+E+P+ Y W++F+ RN L+K+F+ W LLDAY+PTLLR DSH DCLHYC+PGP D WA LLYN LLVA+N
Sbjct: 277 MEASAKALTSSMKRLHGEDKAILVVRNTVPGHWGCTERMFDAPVNKTIALKLVAEAPDSYEWDSFESRNVQLQKAFSPD-RGWTLLDAYSPTLLRPDSHIGNSDCLHYCIPGPADHWALLLYNILLVAKN 405
BLAST of mRNA_H-canaliculatus_M_contigs778.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU41_9PHAE) HSP 1 Score: 148 bits (373), Expect = 2.510e-40 Identity = 73/136 (53.68%), Postives = 92/136 (67.65%), Query Frame = 1
Query: 1 MKAASASLEASMRRLHGENAILVVRNTPPGHGHCAER-------MFAAPIDFRAAARLVSESPEEYGWNTFDLRNEILEKSFTGSGSSWKLLDAYTPTLLRADSHRTLEDCLHYCLPGPLDLWASLLYNLLVAENT 387
MK AS L +SMRRLHG+NAILVVRNT PGHG ER MF+ P+D A LV + Y W+TF +N++LE++F + SW LLDAY+PT+LRADSH + D LHYC+PGP+D W LLYN+L+ T
Sbjct: 281 MKNASEILTSSMRRLHGDNAILVVRNTVPGHGESYERWETAEEKMFSGPVDVDTALDLVEKGRPGYLWSTFGDKNKLLEEAFVAAHGSWTLLDAYSPTILRADSHPSANDGLHYCVPGPIDNWVVLLYNILLERVT 416
BLAST of mRNA_H-canaliculatus_M_contigs778.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHR2_ECTSI) HSP 1 Score: 148 bits (373), Expect = 3.280e-40 Identity = 70/127 (55.12%), Postives = 89/127 (70.08%), Query Frame = 1
Query: 1 MKAASASLEASMRRLHGENAILVVRNTPPGHGHCAERMFAAPIDFRAAARLVSESPEEYGWNTFDLRNEILEKSFTGSGSSWKLLDAYTPTLLRADSHRTLEDCLHYCLPGPLDLWASLLYNLLVAE 381
+K A SL ASMRRLHG+NAILVVRNT PGHG +RMF P++ A LV + P E+ W T +N +LE++F + W LLDAY+PT+LRADSH + D LHYCLPGP+D W LLYN+L+ +
Sbjct: 305 IKTAGESLTASMRRLHGDNAILVVRNTVPGHGESFDRMFTGPVNLDTALDLVEKGPPEFEWTTILDKNTLLEEAFEAT-HGWTLLDAYSPTILRADSHASATDGLHYCLPGPIDHWVVLLYNILLEK 430
BLAST of mRNA_H-canaliculatus_M_contigs778.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZZ9_9PHAE) HSP 1 Score: 145 bits (366), Expect = 1.240e-39 Identity = 70/133 (52.63%), Postives = 90/133 (67.67%), Query Frame = 1
Query: 1 MKAASASLEASMRRLHGENAILVVRNTPPGHG-HCAERMFAAPIDFRAAARLVSESPEEYGWNTFDLRNEILEKSFTGSGSS-WKLLDAYTPTLLRADSHRTLE---DCLHYCLPGPLDLWASLLYNLLVAEN 384
M+ AS + ASM+RLHG++A+L+VRNTPPGHG C ER F P+D A LV+ P +Y W F N ILE++F + + WK LDAYTPTLLR D H + DCLHYC+PGP+D W LLYN+L+A+
Sbjct: 245 METASKKMTASMKRLHGDDALLIVRNTPPGHGVTCTERTFDGPVDVDTALDLVASGPHQYQWGRFPKYNAILEEAFLSNATDGWKELDAYTPTLLRPDFHLGGDENPDCLHYCIPGPIDHWVRLLYNMLLAKG 377
BLAST of mRNA_H-canaliculatus_M_contigs778.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9Y7_9PHAE) HSP 1 Score: 142 bits (358), Expect = 4.610e-39 Identity = 68/127 (53.54%), Postives = 89/127 (70.08%), Query Frame = 1
Query: 1 MKAASASLEASMRRLHGENAILVVRNTPPGHGHCAERMFAAPIDFRAAARLVSESPEEYGWNTFDLRNEILEKSFTGSGSSWKLLDAYTPTLLRADSHRTLEDCLHYCLPGPLDLWASLLYNLLVAE 381
+K A+ SL ASMRRLHG++AILVVRNT PGHG +RMF P++ A LV + P E+ W T +N +LE++F + LLDAY+PT+LRADSH + D LHYCLPGP+D W LLYN+L+ +
Sbjct: 182 IKTAAESLTASMRRLHGDSAILVVRNTVPGHGESFDRMFTGPVNLDTALDLVEKGPPEFEWTTIRDKNTLLEEAFDATHGR-TLLDAYSPTILRADSHASATDGLHYCLPGPIDHWVVLLYNILLEK 307
BLAST of mRNA_H-canaliculatus_M_contigs778.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL53_ECTSI) HSP 1 Score: 144 bits (362), Expect = 4.640e-39 Identity = 69/132 (52.27%), Postives = 88/132 (66.67%), Query Frame = 1
Query: 1 MKAASASLEASMRRLHGENAILVVRNTPPGHGHCAERMFAAPIDFRAAARLVSESPEEYGWNTFDLRNEILEKSFT-GSGSSWKLLDAYTPTLLRADSHRTLED---CLHYCLPGPLDLWASLLYNLLVAEN 384
M AS L ASM+RLHG++A+L+VRNTPPGHG C+ER F P+D A LV+ P +Y W F N +LE++F + WK LDAYTPTLLR D H +D CLHYC+PGP+ W LLYN+L+A+
Sbjct: 244 MGTASKELTASMKRLHGDDALLIVRNTPPGHGGCSERTFDGPVDVDTALDLVASGPHQYQWGRFPEYNAMLEEAFLINATDGWKELDAYTPTLLRPDFHLGGDDNPDCLHYCIPGPIYHWVRLLYNMLLAKG 375 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs778.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs778.1.1 >prot_H-canaliculatus_M_contigs778.1.1 ID=prot_H-canaliculatus_M_contigs778.1.1|Name=mRNA_H-canaliculatus_M_contigs778.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=131bp MKAASASLEASMRRLHGENAILVVRNTPPGHGHCAERMFAAPIDFRAAARback to top mRNA from alignment at H-canaliculatus_M_contigs778:2503..4116+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs778.1.1 ID=mRNA_H-canaliculatus_M_contigs778.1.1|Name=mRNA_H-canaliculatus_M_contigs778.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=1614bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs778:2503..4116+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs778:2503..4116+ >mRNA_H-canaliculatus_M_contigs778.1.1 ID=mRNA_H-canaliculatus_M_contigs778.1.1|Name=mRNA_H-canaliculatus_M_contigs778.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=393bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs778:2503..4116+ (Hapterophycus canaliculatus Oshoro7m male)back to top |