mRNA_H-canaliculatus_M_contigs778.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs778.1.1
Unique NamemRNA_H-canaliculatus_M_contigs778.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs778.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G218_ECTSI)

HSP 1 Score: 160 bits (405), Expect = 5.650e-47
Identity = 74/127 (58.27%), Postives = 93/127 (73.23%), Query Frame = 1
Query:    1 MKAASASLEASMRRLHGENAILVVRNTPPGHGHCAERMFAAPIDFRAAARLVSESPEEYGWNTFDLRNEILEKSFTGSGSSWKLLDAYTPTLLRADSHRTLEDCLHYCLPGPLDLWASLLYNLLVAE 381
            MK+AS SL +SMRRLHG+NAILVVRNT PGHG   +RMF  P+D   A  LV++ P  Y W TF  RN++LE++F  +   W LLDAY+PT+LRAD H + ED LHYCLPGP+D W  LLYN+L+ +
Sbjct:  105 MKSASESLTSSMRRLHGDNAILVVRNTVPGHGESFDRMFGGPVDLDTALDLVAKGPPMYKWTTFGDRNKLLEEAFEATHGGWTLLDAYSPTILRADFHASEEDGLHYCLPGPIDHWVVLLYNILLEK 231          
BLAST of mRNA_H-canaliculatus_M_contigs778.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7J3_9PHAE)

HSP 1 Score: 161 bits (407), Expect = 4.840e-45
Identity = 74/127 (58.27%), Postives = 91/127 (71.65%), Query Frame = 1
Query:    1 MKAASASLEASMRRLHGENAILVVRNTPPGHGHCAERMFAAPIDFRAAARLVSESPEEYGWNTFDLRNEILEKSFTGSGSSWKLLDAYTPTLLRADSHRTLEDCLHYCLPGPLDLWASLLYNLLVAE 381
            MK AS SL  SMRRLHG+NAILVVRNT PGHG   +RMF  P+D   A  LV++ P  Y W TF  RN++LE++F  +   W LLDAY+PT+LRADSH +  D LHYCLPGP+D W  LLYN+L+ +
Sbjct:  323 MKNASESLTTSMRRLHGDNAILVVRNTVPGHGESFDRMFGGPVDLDTALDLVAKGPPRYKWTTFGDRNKLLEEAFEATNGGWTLLDAYSPTILRADSHASATDGLHYCLPGPIDHWVVLLYNILLEK 449          
BLAST of mRNA_H-canaliculatus_M_contigs778.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT34_ECTSI)

HSP 1 Score: 146 bits (368), Expect = 9.700e-43
Identity = 71/129 (55.04%), Postives = 93/129 (72.09%), Query Frame = 1
Query:    1 MKAASASLEASMRRLHGEN-AILVVRNTPPGHGHCAERMFAAPIDFRAAARLVSESPEEYGWNTFDLRNEILEKSFTGSGSSWKLLDAYTPTLLRADSHRTLEDCLHYCLPGPLDLWASLLYNLLVAEN 384
            M+A++ +L +SM+RLHGE+ AILVVRNT PGH  C ERMF  P++   A++LV+E+P  Y WN+F+ RN  L+K+F+     WKLLDAY+PTLLR DSH    DCLHYC+P P D WA LL N+L+   
Sbjct:    1 MEASAKALTSSMKRLHGEDKAILVVRNTVPGHWGCTERMFDGPVNKIIASKLVAEAPGSYEWNSFESRNVQLQKAFSPD-RGWKLLDAYSPTLLRPDSHIANNDCLHYCMPDPADHWARLLCNILLVAK 128          
BLAST of mRNA_H-canaliculatus_M_contigs778.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9U7_9PHAE)

HSP 1 Score: 145 bits (366), Expect = 2.140e-42
Identity = 70/133 (52.63%), Postives = 91/133 (68.42%), Query Frame = 1
Query:    1 MKAASASLEASMRRLHGENAILVVRNTPPGHG-HCAERMFAAPIDFRAAARLVSESPEEYGWNTFDLRNEILEKSFTGSGSS-WKLLDAYTPTLLRADSHRTLE---DCLHYCLPGPLDLWASLLYNLLVAEN 384
            M+ AS  + ASM+RLHG++A+L+VRNTPPGHG  C ER F  P+D   A  LV+  P +Y W  F   N ILE++F G+ +  WK LDAYTPTLLR D H   +   DCLHYC+PGP+D W  LLY++L+A+ 
Sbjct:    1 METASKEITASMKRLHGDDALLIVRNTPPGHGVTCTERTFDGPVDVDTAIDLVASGPHQYQWGRFPEYNAILEEAFLGNATDGWKELDAYTPTLLRPDFHLGGDENPDCLHYCIPGPIDHWVRLLYSMLLAKG 133          
BLAST of mRNA_H-canaliculatus_M_contigs778.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFW9_9PHAE)

HSP 1 Score: 152 bits (383), Expect = 6.730e-42
Identity = 76/130 (58.46%), Postives = 98/130 (75.38%), Query Frame = 1
Query:    1 MKAASASLEASMRRLHGEN-AILVVRNTPPGHGHCAERMFAAPIDFRAAARLVSESPEEYGWNTFDLRNEILEKSFTGSGSSWKLLDAYTPTLLRADSHRTLEDCLHYCLPGPLDLWASLLYN-LLVAEN 384
            M+A++ +L +SM+RLHGE+ AILVVRNT PGH  C ERMF AP++   A +LV+E+P+ Y W++F+ RN  L+K+F+     W LLDAY+PTLLR DSH    DCLHYC+PGP D WA LLYN LLVA+N
Sbjct:  277 MEASAKALTSSMKRLHGEDKAILVVRNTVPGHWGCTERMFDAPVNKTIALKLVAEAPDSYEWDSFESRNVQLQKAFSPD-RGWTLLDAYSPTLLRPDSHIGNSDCLHYCIPGPADHWALLLYNILLVAKN 405          
BLAST of mRNA_H-canaliculatus_M_contigs778.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU41_9PHAE)

HSP 1 Score: 148 bits (373), Expect = 2.510e-40
Identity = 73/136 (53.68%), Postives = 92/136 (67.65%), Query Frame = 1
Query:    1 MKAASASLEASMRRLHGENAILVVRNTPPGHGHCAER-------MFAAPIDFRAAARLVSESPEEYGWNTFDLRNEILEKSFTGSGSSWKLLDAYTPTLLRADSHRTLEDCLHYCLPGPLDLWASLLYNLLVAENT 387
            MK AS  L +SMRRLHG+NAILVVRNT PGHG   ER       MF+ P+D   A  LV +    Y W+TF  +N++LE++F  +  SW LLDAY+PT+LRADSH +  D LHYC+PGP+D W  LLYN+L+   T
Sbjct:  281 MKNASEILTSSMRRLHGDNAILVVRNTVPGHGESYERWETAEEKMFSGPVDVDTALDLVEKGRPGYLWSTFGDKNKLLEEAFVAAHGSWTLLDAYSPTILRADSHPSANDGLHYCVPGPIDNWVVLLYNILLERVT 416          
BLAST of mRNA_H-canaliculatus_M_contigs778.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHR2_ECTSI)

HSP 1 Score: 148 bits (373), Expect = 3.280e-40
Identity = 70/127 (55.12%), Postives = 89/127 (70.08%), Query Frame = 1
Query:    1 MKAASASLEASMRRLHGENAILVVRNTPPGHGHCAERMFAAPIDFRAAARLVSESPEEYGWNTFDLRNEILEKSFTGSGSSWKLLDAYTPTLLRADSHRTLEDCLHYCLPGPLDLWASLLYNLLVAE 381
            +K A  SL ASMRRLHG+NAILVVRNT PGHG   +RMF  P++   A  LV + P E+ W T   +N +LE++F  +   W LLDAY+PT+LRADSH +  D LHYCLPGP+D W  LLYN+L+ +
Sbjct:  305 IKTAGESLTASMRRLHGDNAILVVRNTVPGHGESFDRMFTGPVNLDTALDLVEKGPPEFEWTTILDKNTLLEEAFEAT-HGWTLLDAYSPTILRADSHASATDGLHYCLPGPIDHWVVLLYNILLEK 430          
BLAST of mRNA_H-canaliculatus_M_contigs778.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZZ9_9PHAE)

HSP 1 Score: 145 bits (366), Expect = 1.240e-39
Identity = 70/133 (52.63%), Postives = 90/133 (67.67%), Query Frame = 1
Query:    1 MKAASASLEASMRRLHGENAILVVRNTPPGHG-HCAERMFAAPIDFRAAARLVSESPEEYGWNTFDLRNEILEKSFTGSGSS-WKLLDAYTPTLLRADSHRTLE---DCLHYCLPGPLDLWASLLYNLLVAEN 384
            M+ AS  + ASM+RLHG++A+L+VRNTPPGHG  C ER F  P+D   A  LV+  P +Y W  F   N ILE++F  + +  WK LDAYTPTLLR D H   +   DCLHYC+PGP+D W  LLYN+L+A+ 
Sbjct:  245 METASKKMTASMKRLHGDDALLIVRNTPPGHGVTCTERTFDGPVDVDTALDLVASGPHQYQWGRFPKYNAILEEAFLSNATDGWKELDAYTPTLLRPDFHLGGDENPDCLHYCIPGPIDHWVRLLYNMLLAKG 377          
BLAST of mRNA_H-canaliculatus_M_contigs778.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9Y7_9PHAE)

HSP 1 Score: 142 bits (358), Expect = 4.610e-39
Identity = 68/127 (53.54%), Postives = 89/127 (70.08%), Query Frame = 1
Query:    1 MKAASASLEASMRRLHGENAILVVRNTPPGHGHCAERMFAAPIDFRAAARLVSESPEEYGWNTFDLRNEILEKSFTGSGSSWKLLDAYTPTLLRADSHRTLEDCLHYCLPGPLDLWASLLYNLLVAE 381
            +K A+ SL ASMRRLHG++AILVVRNT PGHG   +RMF  P++   A  LV + P E+ W T   +N +LE++F  +     LLDAY+PT+LRADSH +  D LHYCLPGP+D W  LLYN+L+ +
Sbjct:  182 IKTAAESLTASMRRLHGDSAILVVRNTVPGHGESFDRMFTGPVNLDTALDLVEKGPPEFEWTTIRDKNTLLEEAFDATHGR-TLLDAYSPTILRADSHASATDGLHYCLPGPIDHWVVLLYNILLEK 307          
BLAST of mRNA_H-canaliculatus_M_contigs778.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL53_ECTSI)

HSP 1 Score: 144 bits (362), Expect = 4.640e-39
Identity = 69/132 (52.27%), Postives = 88/132 (66.67%), Query Frame = 1
Query:    1 MKAASASLEASMRRLHGENAILVVRNTPPGHGHCAERMFAAPIDFRAAARLVSESPEEYGWNTFDLRNEILEKSFT-GSGSSWKLLDAYTPTLLRADSHRTLED---CLHYCLPGPLDLWASLLYNLLVAEN 384
            M  AS  L ASM+RLHG++A+L+VRNTPPGHG C+ER F  P+D   A  LV+  P +Y W  F   N +LE++F   +   WK LDAYTPTLLR D H   +D   CLHYC+PGP+  W  LLYN+L+A+ 
Sbjct:  244 MGTASKELTASMKRLHGDDALLIVRNTPPGHGGCSERTFDGPVDVDTALDLVASGPHQYQWGRFPEYNAMLEEAFLINATDGWKELDAYTPTLLRPDFHLGGDDNPDCLHYCIPGPIYHWVRLLYNMLLAKG 375          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs778.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized5.650e-4758.27protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized4.840e-4558.27protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized9.700e-4355.04protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized2.140e-4252.63protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized6.730e-4258.46protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized2.510e-4053.68protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized3.280e-4055.12protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.240e-3952.63protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized4.610e-3953.54protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized4.640e-3952.27protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs778contigH-canaliculatus_M_contigs778:2503..4116 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog5286.M7WYV5
PFAMsPC-Esterase
Model size393
Max annot lvl4751|Fungi
Hectar predicted targeting categoryother localisation
Exons3
Evalue2.1e-13
EggNOG OGs29J3F@1|root,2RSBH@2759|Eukaryota,3AD8Z@33154|Opisthokonta,3P97F@4751|Fungi,3V2WR@5204|Basidiomycota
Cds size393
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854114.7861345-CDS-H-canaliculatus_M_contigs778:2502..26121696854114.7861345-CDS-H-canaliculatus_M_contigs778:2502..2612Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs778 2503..2612 +
1696854114.7984169-CDS-H-canaliculatus_M_contigs778:3348..34451696854114.7984169-CDS-H-canaliculatus_M_contigs778:3348..3445Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs778 3349..3445 +
1696854114.8100684-CDS-H-canaliculatus_M_contigs778:3930..41161696854114.8100684-CDS-H-canaliculatus_M_contigs778:3930..4116Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs778 3931..4116 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs778.1.1prot_H-canaliculatus_M_contigs778.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs778 2503..4116 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs778.1.1

>prot_H-canaliculatus_M_contigs778.1.1 ID=prot_H-canaliculatus_M_contigs778.1.1|Name=mRNA_H-canaliculatus_M_contigs778.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=131bp
MKAASASLEASMRRLHGENAILVVRNTPPGHGHCAERMFAAPIDFRAAAR
LVSESPEEYGWNTFDLRNEILEKSFTGSGSSWKLLDAYTPTLLRADSHRT
LEDCLHYCLPGPLDLWASLLYNLLVAENTG*
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mRNA from alignment at H-canaliculatus_M_contigs778:2503..4116+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs778.1.1 ID=mRNA_H-canaliculatus_M_contigs778.1.1|Name=mRNA_H-canaliculatus_M_contigs778.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=1614bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs778:2503..4116+ (Hapterophycus canaliculatus Oshoro7m male)
ATGAAGGCCGCGAGCGCGTCGTTGGAAGCGTCAATGCGACGGTTGCACGG AGAAAATGCGATTTTGGTCGTCAGGAATACCCCTCCAGGACACGGTCACT GTGCGGAAAGGTGAAAAACTCTCATGGATTCCAGCGGAATTGCAACACTC TGCGGTAGAAGGATGGTTTCGCCGTCGATCCCAGAAAATGAATCGTACCT CCTTATGTACCGTTCATTGTGCAAGCGCTTCGCAGGTGAAGGCATGAGGT ATAGCTTTGGCTTATTGCCCGATCCGAACACGAACATGTCAATGTTTGAC CCATCCATTGAAGGAGTCTTCCGTGCACGTTAGTGCGTCGTCGTCGTCGT CGTCGTCGTCAGCGACGGCATCCTTTCAGCCGTAGTCGCCATCCATGTAG TTTCTTCCATTGTCATCTTCGCCGTCGTCGTAATAGCTGTTCGTCTCTCC GACCAGCACTTCGTGTTGAGAACTACGTCAACCAATCACAGCAGTCGGAT TTCGCGACCACAGGCTGACCGAAGGGGCACGCATCAAACAATATACCCCC GCTAAGGTCCTTCAAAATGAATAAAAACATGCGGTCCTTTGAAAATGTAC GAAAGCATCCGGACATAAGAAGGACATTCAAGATGATCAAAGTATGGACC CATCGCAAAGACTTGGAATCAACATGGTAGAATAAAATTACCTGCAACAT GCATGTAAAAGGACCCATCAAATCTCCTAGTGAAGGCACAAGAGAGCTGG GCAACATTTTATGAGCATAGTCGGTTATCCTGAAACTCCTGCCTCACAGA AGTGACTGTGTGTGATGCAATCCACTTCCTCCGGATGAAATGGCAGGATG TTTGCCGCACCCATTGATTTCCGTGCCGCCGCGAGGCTCGTTTCCGAGTC ACCTGAAGAGTATGGCTGGAACACCTTTGACCTCAGGAATGAGGTGAGAA TCGCCCAAGCATTTGGACTCCGAACAAGATAAGCTGCGACTTGTTGTGCA CATCAACGATCCCCGCTTGAGAGGCCCAAGGATGGTGTAAGTAGACCAAA TCTTCCGCAGCCGATCGTGTGCATAACCCTGAAAGTTTTCGAGTTTGCGA CAACAACAATGAATGCACGCACGATGTTCGCGGTTCTCAGTCGTGAAAGT AAACCGACGACCTCTAGGTTTTTGCTTCTTGTGGTGTATGGATATATCGC GCACGGCTTCAGCTTTCTCGGCGGATCGCAGCATGTCGAGACACTCGAAC GACAATGGTAGGCCTGTTTGGAACCAAAATACGAAAAATCAGACAAGTGG CGGCCACCGAGTATTAGGGGCGAGTCTCATCATCCTCCCGTGTATGGTAA TCAATTGCCGTGCCTTCGCCACTCCTGCCCGATCGTGTTTTCGCCTGTCT GCGCATGTGGGGACCGTTCTCCGAAAAGATTCTCGAGAAATCCTTCACGG GTAGCGGCAGCAGCTGGAAGTTGTTGGATGCATACACGCCGACCCTTCTG CGGGCAGATTCGCACCGAACGCTCGAAGACTGCCTGCACTATTGCCTGCC GGGACCATTAGACCTTTGGGCGTCGCTTCTATACAACCTTCTGGTAGCCG AAAACACGGGTTGA
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs778:2503..4116+

>mRNA_H-canaliculatus_M_contigs778.1.1 ID=mRNA_H-canaliculatus_M_contigs778.1.1|Name=mRNA_H-canaliculatus_M_contigs778.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=393bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs778:2503..4116+ (Hapterophycus canaliculatus Oshoro7m male)
ATGAAGGCCGCGAGCGCGTCGTTGGAAGCGTCAATGCGACGGTTGCACGG
AGAAAATGCGATTTTGGTCGTCAGGAATACCCCTCCAGGACACGGTCACT
GTGCGGAAAGGATGTTTGCCGCACCCATTGATTTCCGTGCCGCCGCGAGG
CTCGTTTCCGAGTCACCTGAAGAGTATGGCTGGAACACCTTTGACCTCAG
GAATGAGATTCTCGAGAAATCCTTCACGGGTAGCGGCAGCAGCTGGAAGT
TGTTGGATGCATACACGCCGACCCTTCTGCGGGCAGATTCGCACCGAACG
CTCGAAGACTGCCTGCACTATTGCCTGCCGGGACCATTAGACCTTTGGGC
GTCGCTTCTATACAACCTTCTGGTAGCCGAAAACACGGGTTGA
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