mRNA_H-canaliculatus_M_contigs77798.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs77798.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIJ8_ECTSI) HSP 1 Score: 129 bits (325), Expect = 3.350e-33 Identity = 61/68 (89.71%), Postives = 66/68 (97.06%), Query Frame = 1
Query: 34 RSLAAYDFSSANVTLIPSVPGRHSGKNLYKYGHMRVRAVLAREEVHVRPGSHKVAFQVASIMNLSRRP 237
RSL+AYDFSSANVTLIPSVPGRH G++LY+YGHMRVRAVLAREEVHVRPGSH+VAFQ ASIMNLSRRP
Sbjct: 443 RSLSAYDFSSANVTLIPSVPGRHKGRDLYRYGHMRVRAVLAREEVHVRPGSHRVAFQAASIMNLSRRP 510
BLAST of mRNA_H-canaliculatus_M_contigs77798.1.1 vs.
Match: Tyrosyl-DNA (phosphodiesterase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE95_ECTSI) HSP 1 Score: 71.6 bits (174), Expect = 8.530e-13 Identity = 37/85 (43.53%), Postives = 52/85 (61.18%), Query Frame = 1
Query: 31 ARSLAAYDFSSANVTLIPSVPGR-----------HSGKNLYKYGHMRVRAVLAREE-----VHVRPGSHKVAFQVASIMNLSRRP 237
A +L YDF A V L+PSVPG H G++L+KYGHMRVRA+LARE+ ++ G HKV Q++S+ +L++ P
Sbjct: 243 ASTLGEYDFRGARVALVPSVPGTGGNTPGTGGKPHKGRDLHKYGHMRVRALLAREKEDGTGAKLKEGGHKVLCQISSLASLTKTP 327
BLAST of mRNA_H-canaliculatus_M_contigs77798.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBB1_9PHAE) HSP 1 Score: 67.0 bits (162), Expect = 2.030e-11 Identity = 37/68 (54.41%), Postives = 40/68 (58.82%), Query Frame = 1
Query: 34 RSLAAYDFSSANVTLIPSVPGRHSGKNLYKYGHMRVRAVLAREEVHVRPGSHKVAFQVASIMNLSRRP 237
RSL AYDFSSAN TLIPSVPGRH GK+LY+ VAFQ AS+MNLS RP
Sbjct: 169 RSLFAYDFSSANATLIPSVPGRHKGKDLYR-----------------------VAFQAASVMNLSLRP 213
BLAST of mRNA_H-canaliculatus_M_contigs77798.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIS9_PYTOL) HSP 1 Score: 67.0 bits (162), Expect = 3.560e-11 Identity = 31/67 (46.27%), Postives = 46/67 (68.66%), Query Frame = 1
Query: 34 RSLAAYDFSSANVTLIPSVPGRHSGKNLYKYGHMRVRAVLAREEVHVRPGSHKVAFQVASIMNLSRR 234
+ L+ +DFS+A V LIPSVPG H+GK ++KYGH+RVRA+L + V P H + Q +S+ +L +
Sbjct: 227 KELSRFDFSTATVALIPSVPGAHTGKAMHKYGHLRVRALL--KHFAVAPSDHPLICQFSSLGSLDEK 291
BLAST of mRNA_H-canaliculatus_M_contigs77798.1.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2QB12_9DINO) HSP 1 Score: 58.5 bits (140), Expect = 2.120e-9 Identity = 26/48 (54.17%), Postives = 34/48 (70.83%), Query Frame = 1
Query: 28 DARSLAAYDFSSANVTLIPSVPGRHSGKNLYKYGHMRVRAVLAREEVH 171
DA L YDFS+A+V L+ SVPG HSG +++GHMR+R +LAR H
Sbjct: 40 DASRLDGYDFSTASVGLVASVPGYHSGPEAFEWGHMRLRQLLARHAKH 87
BLAST of mRNA_H-canaliculatus_M_contigs77798.1.1 vs.
Match: Tyrosyl-DNA (phosphodiesterase 1 n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4E9V0_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 5.280e-9 Identity = 30/67 (44.78%), Postives = 43/67 (64.18%), Query Frame = 1
Query: 34 RSLAAYDFSSANVTLIPSVPGRHSGKNLYKYGHMRVRAVLAREEVHVRPGSHKVAFQVASIMNLSRR 234
R L +DFSSA V L+PSVPG H GK++ KYGH+RVR +L +V P + + Q +S+ +L +
Sbjct: 230 RELKRFDFSSARVALVPSVPGYHKGKDMEKYGHLRVRKLLKMYQVP--PTDNPLICQFSSMGSLDEK 294
BLAST of mRNA_H-canaliculatus_M_contigs77798.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P8W0_9CHLO) HSP 1 Score: 60.8 bits (146), Expect = 5.390e-9 Identity = 24/42 (57.14%), Postives = 36/42 (85.71%), Query Frame = 1
Query: 37 SLAAYDFSSANVTLIPSVPGRHSGKNLYKYGHMRVRAVLARE 162
++A +DFSSA + L PSVPGRH+G L++YGH+RVR++L++E
Sbjct: 374 AIARHDFSSARIALAPSVPGRHTGPALFRYGHLRVRSLLSQE 415
BLAST of mRNA_H-canaliculatus_M_contigs77798.1.1 vs.
Match: Phospholipase (D/nuclease n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Z208_9FUNG) HSP 1 Score: 60.1 bits (144), Expect = 8.540e-9 Identity = 32/74 (43.24%), Postives = 45/74 (60.81%), Query Frame = 1
Query: 16 NKTPDARSLAAYDFSSANVTLIPSVPGRHSGKNLYKYGHMRVRAVLAREEVHVRPGSHKVAFQVASIMNLSRRP 237
N T D L+ YDFS T+I SVPGRH+G L+K+GHMRVR +L+ + + S + Q +SI +L + P
Sbjct: 118 NSTRD--KLSKYDFSPCKGTIIGSVPGRHAGTELHKWGHMRVREILSTMALGKQFQSSSLILQFSSIGSLGKTP 189
BLAST of mRNA_H-canaliculatus_M_contigs77798.1.1 vs.
Match: Carbonic (anhydrase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XVY7_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 1.380e-8 Identity = 29/67 (43.28%), Postives = 44/67 (65.67%), Query Frame = 1
Query: 34 RSLAAYDFSSANVTLIPSVPGRHSGKNLYKYGHMRVRAVLAREEVHVRPGSHKVAFQVASIMNLSRR 234
R +A +DFS ANV LIPSVPG H G ++ K+GH+RVR +L + + V P + + Q +S+ +L +
Sbjct: 481 RHVARFDFSGANVALIPSVPGVHKGSDMEKFGHLRVRKLL--QLLKVPPSDNPLICQFSSMGSLDEK 545
BLAST of mRNA_H-canaliculatus_M_contigs77798.1.1 vs.
Match: PLD (phosphodiesterase domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZA01_CHLVA) HSP 1 Score: 58.2 bits (139), Expect = 4.520e-8 Identity = 29/65 (44.62%), Postives = 43/65 (66.15%), Query Frame = 1
Query: 40 LAAYDFSSANVTLIPSVPGRHSGKNLYKYGHMRVRAVLAREEVHVRPGSHKVAFQVASIMNLSRR 234
+ + DFS+A L+ SVPGRH G +L+K+GHMR+RAVL +E R +A Q++S+ L+ R
Sbjct: 262 IRSCDFSAARGHLVASVPGRHKGADLHKWGHMRMRAVLCQEAFPARFRGAPLAAQMSSLGLLNER 326 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs77798.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs77798.1.1 >prot_H-canaliculatus_M_contigs77798.1.1 ID=prot_H-canaliculatus_M_contigs77798.1.1|Name=mRNA_H-canaliculatus_M_contigs77798.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=79bp DLPKRNKTPDARSLAAYDFSSANVTLIPSVPGRHSGKNLYKYGHMRVRAVback to top mRNA from alignment at H-canaliculatus_M_contigs77798:204..440- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs77798.1.1 ID=mRNA_H-canaliculatus_M_contigs77798.1.1|Name=mRNA_H-canaliculatus_M_contigs77798.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=237bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs77798:204..440- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs77798:204..440- >mRNA_H-canaliculatus_M_contigs77798.1.1 ID=mRNA_H-canaliculatus_M_contigs77798.1.1|Name=mRNA_H-canaliculatus_M_contigs77798.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=237bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs77798:204..440- (Hapterophycus canaliculatus Oshoro7m male)back to top |