mRNA_H-canaliculatus_M_contigs77600.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs77600.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPE5_9PHAE) HSP 1 Score: 160 bits (405), Expect = 1.350e-44 Identity = 76/78 (97.44%), Postives = 77/78 (98.72%), Query Frame = 1
Query: 19 RIVYCSATGASEPRNLGYMTRLGLWGAIGSPFPGGFKDFLTAVDGRGVGAMELVAMHLKQTGSFVCRTLSFSGCGFEV 252
RIVYCSATGASEPRNLGYMTRLGLWGAIGSPFPGGFKDFLTAVDGRGVGAMELVAMHLKQTGSFVCRTLSFSGC FE+
Sbjct: 231 RIVYCSATGASEPRNLGYMTRLGLWGAIGSPFPGGFKDFLTAVDGRGVGAMELVAMHLKQTGSFVCRTLSFSGCAFEL 308
BLAST of mRNA_H-canaliculatus_M_contigs77600.1.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL28_ECTSI) HSP 1 Score: 155 bits (392), Expect = 3.410e-42 Identity = 74/78 (94.87%), Postives = 75/78 (96.15%), Query Frame = 1
Query: 19 RIVYCSATGASEPRNLGYMTRLGLWGAIGSPFPGGFKDFLTAVDGRGVGAMELVAMHLKQTGSFVCRTLSFSGCGFEV 252
RIVYCSATGASEPRNLGYMTRLGLWGAIGSPFPGGFKDFLT VDGRGVGAMELVAMHLKQ GSFVCRTLSFSGC FE+
Sbjct: 454 RIVYCSATGASEPRNLGYMTRLGLWGAIGSPFPGGFKDFLTPVDGRGVGAMELVAMHLKQRGSFVCRTLSFSGCPFEL 531
BLAST of mRNA_H-canaliculatus_M_contigs77600.1.1 vs.
Match: P-loop (containing NTP hydrolase pore-1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH69_9STRA) HSP 1 Score: 131 bits (329), Expect = 2.980e-34 Identity = 60/78 (76.92%), Postives = 70/78 (89.74%), Query Frame = 1
Query: 19 RIVYCSATGASEPRNLGYMTRLGLWGAIGSPFPGGFKDFLTAVDGRGVGAMELVAMHLKQTGSFVCRTLSFSGCGFEV 252
R+VYCSATGASEPRNLGYMTRLGLWG G+PFP GF+ L VDG GVGAME++AMHLKQ+G+F+CRTLSF+GCGFE+
Sbjct: 276 RVVYCSATGASEPRNLGYMTRLGLWGQ-GTPFPSGFEQLLGTVDGHGVGAMEMMAMHLKQSGAFLCRTLSFAGCGFEL 352
BLAST of mRNA_H-canaliculatus_M_contigs77600.1.1 vs.
Match: Protein (strawberry notch homolog 1 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WME0_9CHLO) HSP 1 Score: 117 bits (292), Expect = 1.190e-28 Identity = 58/78 (74.36%), Postives = 63/78 (80.77%), Query Frame = 1
Query: 19 RIVYCSATGASEPRNLGYMTRLGLWGAIGSPFPGGFKDFLTAVDGRGVGAMELVAMHLKQTGSFVCRTLSFSGCGFEV 252
R+VYCSATGASEPRNLGYM RLGLWG +G+P F DFL AV GRGVGA+ELVAM +K G FVCRTLSF GC FEV
Sbjct: 444 RVVYCSATGASEPRNLGYMERLGLWG-VGTPSFATFPDFLEAVGGRGVGALELVAMDMKARGMFVCRTLSFKGCEFEV 520
BLAST of mRNA_H-canaliculatus_M_contigs77600.1.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YZS5_COCSC) HSP 1 Score: 115 bits (289), Expect = 3.010e-28 Identity = 58/78 (74.36%), Postives = 62/78 (79.49%), Query Frame = 1
Query: 19 RIVYCSATGASEPRNLGYMTRLGLWGAIGSPFPGGFKDFLTAVDGRGVGAMELVAMHLKQTGSFVCRTLSFSGCGFEV 252
R+VYCSATGASEPRNLGYM RLGLWG G+P F DFL AV GRGVGA+ELVAM +K G FVCRTLSF GC FEV
Sbjct: 230 RVVYCSATGASEPRNLGYMERLGLWGE-GTPSFASFPDFLEAVGGRGVGALELVAMDMKARGMFVCRTLSFKGCEFEV 306
BLAST of mRNA_H-canaliculatus_M_contigs77600.1.1 vs.
Match: AAA_34 (domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNP5_AURAN) HSP 1 Score: 112 bits (281), Expect = 1.890e-27 Identity = 55/78 (70.51%), Postives = 60/78 (76.92%), Query Frame = 1
Query: 19 RIVYCSATGASEPRNLGYMTRLGLWGAIGSPFPGGFKDFLTAVDGRGVGAMELVAMHLKQTGSFVCRTLSFSGCGFEV 252
R+VYCSATGASEPR+LGYM RLGLWG PF F+ FLT VD RGVG MELVAMHLKQ G+ VCR LSF C FE+
Sbjct: 274 RVVYCSATGASEPRHLGYMDRLGLWGGDACPFAS-FRSFLTEVDKRGVGMMELVAMHLKQRGALVCRALSFKNCTFEL 350
BLAST of mRNA_H-canaliculatus_M_contigs77600.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JZA5_9STRA) HSP 1 Score: 108 bits (271), Expect = 8.180e-26 Identity = 55/79 (69.62%), Postives = 62/79 (78.48%), Query Frame = 1
Query: 19 RIVYCSATGASEPRNLGYMTRLGLWGAI-GSPFPGGFKDFLTAVDGRGVGAMELVAMHLKQTGSFVCRTLSFSGCGFEV 252
RIVYCSATGASEPR+ GYM RLGLWG+ G+PFP F+ FL V+ RGVG MELVAMHLKQ G+ VCR LSF C FE+
Sbjct: 315 RIVYCSATGASEPRHFGYMERLGLWGSHPGAPFPN-FEVFLDEVESRGVGMMELVAMHLKQQGALVCRALSFKNCTFEL 392
BLAST of mRNA_H-canaliculatus_M_contigs77600.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S7U1_9STRA) HSP 1 Score: 108 bits (269), Expect = 1.510e-25 Identity = 53/78 (67.95%), Postives = 60/78 (76.92%), Query Frame = 1
Query: 19 RIVYCSATGASEPRNLGYMTRLGLWGAIGSPFPGGFKDFLTAVDGRGVGAMELVAMHLKQTGSFVCRTLSFSGCGFEV 252
R+VYCSATGASEP++LGYM RLGLWG +PF G F DF AV+ RGVG MELVAMHLKQ G+ V R LSF C FE+
Sbjct: 290 RVVYCSATGASEPKHLGYMDRLGLWGGSDTPF-GDFDDFRRAVESRGVGMMELVAMHLKQRGALVSRALSFKSCTFEL 366
BLAST of mRNA_H-canaliculatus_M_contigs77600.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A0M8_9STRA) HSP 1 Score: 108 bits (269), Expect = 1.520e-25 Identity = 53/78 (67.95%), Postives = 60/78 (76.92%), Query Frame = 1
Query: 19 RIVYCSATGASEPRNLGYMTRLGLWGAIGSPFPGGFKDFLTAVDGRGVGAMELVAMHLKQTGSFVCRTLSFSGCGFEV 252
R+VYCSATGASEP++LGYM RLGLWG +PF G F DF AV+ RGVG MELVAMHLKQ G+ V R LSF C FE+
Sbjct: 290 RVVYCSATGASEPKHLGYMDRLGLWGGSDTPF-GDFDDFRRAVESRGVGMMELVAMHLKQRGALVSRALSFKSCTFEL 366
BLAST of mRNA_H-canaliculatus_M_contigs77600.1.1 vs.
Match: Putative (RING/FYVE/PHD zinc finger superfamily protein n=4 Tax=Helianthus annuus TaxID=4232 RepID=A0A251V8M3_HELAN) HSP 1 Score: 107 bits (268), Expect = 2.070e-25 Identity = 55/78 (70.51%), Postives = 63/78 (80.77%), Query Frame = 1
Query: 19 RIVYCSATGASEPRNLGYMTRLGLWGAIGSPFPGGFKDFLTAVDGRGVGAMELVAMHLKQTGSFVCRTLSFSGCGFEV 252
R+VYCSATGASEPRNLGYM RLGLWGA G+ F G F+DFL A+D GVGA+ELVAM +K G +VCRTLS+ G FEV
Sbjct: 375 RVVYCSATGASEPRNLGYMVRLGLWGA-GTSFEG-FRDFLGALDKGGVGALELVAMDMKARGMYVCRTLSYKGVEFEV 450 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs77600.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs77600.1.1 >prot_H-canaliculatus_M_contigs77600.1.1 ID=prot_H-canaliculatus_M_contigs77600.1.1|Name=mRNA_H-canaliculatus_M_contigs77600.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=84bp TTTKTTRIVYCSATGASEPRNLGYMTRLGLWGAIGSPFPGGFKDFLTAVDback to top mRNA from alignment at H-canaliculatus_M_contigs77600:196..447+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs77600.1.1 ID=mRNA_H-canaliculatus_M_contigs77600.1.1|Name=mRNA_H-canaliculatus_M_contigs77600.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=252bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs77600:196..447+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs77600:196..447+ >mRNA_H-canaliculatus_M_contigs77600.1.1 ID=mRNA_H-canaliculatus_M_contigs77600.1.1|Name=mRNA_H-canaliculatus_M_contigs77600.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=252bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs77600:196..447+ (Hapterophycus canaliculatus Oshoro7m male)back to top |