prot_H-canaliculatus_M_contigs766.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs766.1.1
Unique Nameprot_H-canaliculatus_M_contigs766.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length340
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs766.1.1 vs. uniprot
Match: D8LJ60_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ60_ECTSI)

HSP 1 Score: 516 bits (1328), Expect = 2.070e-180
Identity = 278/314 (88.54%), Postives = 290/314 (92.36%), Query Frame = 0 
Query:   16 VMDPRQMVEQEEVGLDVGIEPGAGLGGYPGMDGDLRIISREIYQGKTFDDWDDMEANVRRLARKAGFKVVKDSKGEKRADGRQKRIVWKCDCAGIKTPRKGPKELS-PLPSRERPSKRQGCPFQINATWPEKCLQPGVTRCTLEHNHRLTGPLRAGRQDPVLPEELLAEHVSALKEWARIPVAVRTQMQILRHEFFEGRQLSLEAQRCVHTLSGQEAPRRXXXXXXXXXXXXXXXXXXXVVASLPSSRVNDPIFRDSMTIIGNALRQALESGADAPGLKRRCEGFAEGLRKTTVAATDNTDPSRKRMRVDAGGP 328
            VM+ R + E EE GLDVGIEPGAGLG YPG+DG++RIISREIYQGKTFDDWDDME NVRRLARKAGFK   DSKGEKRADGRQKRIVWKCDCAG+KTPRKG K+L+    SRERPSKRQGCPFQINATWPEKCLQPGVTRCTLEHNHRL GPLRAGRQDPVLPEELLAEHVSALKEWARIPVAVRTQMQILRHEFFEGRQLSLEAQRCVHTLSGQEAPRRXXXXXXXXXXXXXXX    VV SLPSSR+NDP+FR+SMTIIGNALRQALESGADA GLKRRCEGFAEGLRKTTVAATDNTDPSRKR+RVD G P
Sbjct:   60 VMEQRHVAEPEEPGLDVGIEPGAGLG-YPGLDGEMRIISREIYQGKTFDDWDDMEGNVRRLARKAGFK---DSKGEKRADGRQKRIVWKCDCAGMKTPRKGQKDLTHDQTSRERPSKRQGCPFQINATWPEKCLQPGVTRCTLEHNHRLAGPLRAGRQDPVLPEELLAEHVSALKEWARIPVAVRTQMQILRHEFFEGRQLSLEAQRCVHTLSGQEAPRRXXXXXXXXXXXXXXXSPGSVVGSLPSSRINDPVFRESMTIIGNALRQALESGADAAGLKRRCEGFAEGLRKTTVAATDNTDPSRKRIRVDGGSP 369
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs766.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LJ60_ECTSI2.070e-18088.54Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004330FAR1 DNA binding domainPFAMPF03101FAR1coord: 76..163
e-value: 5.1E-7
score: 30.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 311..340

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs766contigH-canaliculatus_M_contigs766:311..4576 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs766.1.1mRNA_H-canaliculatus_M_contigs766.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs766 311..4576 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs766.1.1 ID=prot_H-canaliculatus_M_contigs766.1.1|Name=mRNA_H-canaliculatus_M_contigs766.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=340bp
MNLPPVGSPFMSPAPVMDPRQMVEQEEVGLDVGIEPGAGLGGYPGMDGDL
RIISREIYQGKTFDDWDDMEANVRRLARKAGFKVVKDSKGEKRADGRQKR
IVWKCDCAGIKTPRKGPKELSPLPSRERPSKRQGCPFQINATWPEKCLQP
GVTRCTLEHNHRLTGPLRAGRQDPVLPEELLAEHVSALKEWARIPVAVRT
QMQILRHEFFEGRQLSLEAQRCVHTLSGQEAPRRRAAAAAAAAAAAAAAA
PAAVVASLPSSRVNDPIFRDSMTIIGNALRQALESGADAPGLKRRCEGFA
EGLRKTTVAATDNTDPSRKRMRVDAGGPSPGVSVGGGGIG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004330FAR1_DNA_bnd_dom