prot_H-canaliculatus_M_contigs76264.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs76264.1.1
Unique Nameprot_H-canaliculatus_M_contigs76264.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length60
Homology
BLAST of mRNA_H-canaliculatus_M_contigs76264.1.1 vs. uniprot
Match: A0A0M4J7Q5_ISOGA (Adaptor protein complex 1 subunit gamma (Fragment) n=1 Tax=Isochrysis galbana TaxID=37099 RepID=A0A0M4J7Q5_ISOGA)

HSP 1 Score: 51.2 bits (121), Expect = 1.140e-6
Identity = 23/44 (52.27%), Postives = 32/44 (72.73%), Query Frame = 0
Query:    4 VTGLHFQAAVPKYLRLEMQPASGSVVKARGAGVVEQVVRITNSM 47
            + GL+FQ AVPK++RL+M PAS +VV    +G V QV ++ NSM
Sbjct:   42 IEGLNFQVAVPKFMRLQMTPASSTVVPPNNSGKVTQVFKVANSM 85          
BLAST of mRNA_H-canaliculatus_M_contigs76264.1.1 vs. uniprot
Match: A0A1Y1I093_KLENI (AP-1 complex subunit gamma n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I093_KLENI)

HSP 1 Score: 52.8 bits (125), Expect = 1.770e-6
Identity = 26/47 (55.32%), Postives = 33/47 (70.21%), Query Frame = 0
Query:    2 SDVTGLHFQAAVPKYLRLEMQPASGSVVKARGAGVVEQVVRITNSMQ 48
            S  T   FQAAVPK++ L ++PASGSVV A  AG V Q + +TNS+Q
Sbjct:  771 SPFTDFVFQAAVPKFMTLSLEPASGSVVPAGQAGSVTQTINVTNSLQ 817          
BLAST of mRNA_H-canaliculatus_M_contigs76264.1.1 vs. uniprot
Match: A0A8J5XH90_DIALT (AP-1 complex subunit gamma n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XH90_DIALT)

HSP 1 Score: 52.8 bits (125), Expect = 1.770e-6
Identity = 24/45 (53.33%), Postives = 35/45 (77.78%), Query Frame = 0
Query:    2 SDVTGLHFQAAVPKYLRLEMQPASGSVVKARGAGVVEQVVRITNS 46
            S +T   FQAAVPK+++++MQPASGSVV A  +G V Q++++ NS
Sbjct:  793 SPLTDFVFQAAVPKFMKMQMQPASGSVVPAGNSGAVTQLLKLANS 837          
BLAST of mRNA_H-canaliculatus_M_contigs76264.1.1 vs. uniprot
Match: A0A2R6W898_MARPO (AP-1 complex subunit gamma n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6W898_MARPO)

HSP 1 Score: 52.8 bits (125), Expect = 1.770e-6
Identity = 23/43 (53.49%), Postives = 34/43 (79.07%), Query Frame = 0
Query:    5 TGLHFQAAVPKYLRLEMQPASGSVVKARGAGVVEQVVRITNSM 47
            T   FQAAVPK+L+L+++PASGSV+ A G G++ Q + +TN+M
Sbjct:  835 TDFIFQAAVPKFLQLQLEPASGSVLPASGGGLITQSINLTNTM 877          
BLAST of mRNA_H-canaliculatus_M_contigs76264.1.1 vs. uniprot
Match: A0A7S0LQ80_9EUKA (AP-1 complex subunit gamma n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LQ80_9EUKA)

HSP 1 Score: 51.6 bits (122), Expect = 4.520e-6
Identity = 22/45 (48.89%), Postives = 33/45 (73.33%), Query Frame = 0
Query:    4 VTGLHFQAAVPKYLRLEMQPASGSVVKARGAGVVEQVVRITNSMQ 48
            +  L+FQ AVPKY++L+M PASG+VV    +G + Q+ ++ NSMQ
Sbjct:  711 IAALNFQVAVPKYMKLQMSPASGNVVPPSNSGKLTQLFKVANSMQ 755          
BLAST of mRNA_H-canaliculatus_M_contigs76264.1.1 vs. uniprot
Match: A0A7S3X1K0_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3X1K0_9SPIT)

HSP 1 Score: 50.8 bits (120), Expect = 5.140e-6
Identity = 23/42 (54.76%), Postives = 30/42 (71.43%), Query Frame = 0
Query:    6 GLHFQAAVPKYLRLEMQPASGSVVKARGAGVVEQVVRITNSM 47
            GL+FQ AVPKY++L+M PAS S V   G G V Q+ ++ NSM
Sbjct:  126 GLNFQVAVPKYMKLQMTPASSSTVPPNGMGKVTQLFKVANSM 167          
BLAST of mRNA_H-canaliculatus_M_contigs76264.1.1 vs. uniprot
Match: A0A482ST39_9ARCH (GAE domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482ST39_9ARCH)

HSP 1 Score: 48.5 bits (114), Expect = 8.260e-6
Identity = 24/42 (57.14%), Postives = 29/42 (69.05%), Query Frame = 0
Query:    7 LHFQAAVPKYLRLEMQPASGSVVKARGAGVVEQVVRITNSMQ 48
            L FQAAVPKYL+LEM P S + +     G V Q VR++NSMQ
Sbjct:   33 LVFQAAVPKYLKLEMLPPSSTTISPNSKGSVTQEVRLSNSMQ 74          
BLAST of mRNA_H-canaliculatus_M_contigs76264.1.1 vs. uniprot
Match: A0A5B8ML88_9CHLO (AP-1 complex subunit gamma n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8ML88_9CHLO)

HSP 1 Score: 50.8 bits (120), Expect = 8.460e-6
Identity = 22/45 (48.89%), Postives = 35/45 (77.78%), Query Frame = 0
Query:    4 VTGLHFQAAVPKYLRLEMQPASGSVVKARGAGVVEQVVRITNSMQ 48
            VT    QAAVPKYL+L+M+PA+G+ +   G+G V+Q++R+ NS++
Sbjct:  738 VTDFVLQAAVPKYLQLKMEPATGNQLGPLGSGAVQQIMRVVNSLE 782          
BLAST of mRNA_H-canaliculatus_M_contigs76264.1.1 vs. uniprot
Match: A0A7S3TYL7_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3TYL7_EMIHU)

HSP 1 Score: 49.7 bits (117), Expect = 9.530e-6
Identity = 22/44 (50.00%), Postives = 30/44 (68.18%), Query Frame = 0
Query:    4 VTGLHFQAAVPKYLRLEMQPASGSVVKARGAGVVEQVVRITNSM 47
            +TG +FQ AVPKY++L+M PAS S V    +G V Q  ++ NSM
Sbjct:   89 LTGFNFQVAVPKYMKLQMSPASSSTVPPSNSGKVTQTFKVANSM 132          
BLAST of mRNA_H-canaliculatus_M_contigs76264.1.1 vs. uniprot
Match: A0A7S0IU02_9EUKA (AP-1 complex subunit gamma n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IU02_9EUKA)

HSP 1 Score: 50.4 bits (119), Expect = 1.160e-5
Identity = 22/44 (50.00%), Postives = 32/44 (72.73%), Query Frame = 0
Query:    4 VTGLHFQAAVPKYLRLEMQPASGSVVKARGAGVVEQVVRITNSM 47
            +  L+FQ AVPKY++L+M PASG+VV    +G V Q+ ++ NSM
Sbjct:  782 IGALNFQVAVPKYMKLQMSPASGNVVPPNNSGKVTQLFKVANSM 825          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs76264.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0M4J7Q5_ISOGA1.140e-652.27Adaptor protein complex 1 subunit gamma (Fragment)... [more]
A0A1Y1I093_KLENI1.770e-655.32AP-1 complex subunit gamma n=1 Tax=Klebsormidium n... [more]
A0A8J5XH90_DIALT1.770e-653.33AP-1 complex subunit gamma n=1 Tax=Diacronema luth... [more]
A0A2R6W898_MARPO1.770e-653.49AP-1 complex subunit gamma n=2 Tax=Marchantia poly... [more]
A0A7S0LQ80_9EUKA4.520e-648.89AP-1 complex subunit gamma n=1 Tax=Coccolithus bra... [more]
A0A7S3X1K0_9SPIT5.140e-654.76Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]
A0A482ST39_9ARCH8.260e-657.14GAE domain-containing protein n=1 Tax=archaeon Tax... [more]
A0A5B8ML88_9CHLO8.460e-648.89AP-1 complex subunit gamma n=1 Tax=Chloropicon pri... [more]
A0A7S3TYL7_EMIHU9.530e-650.00Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
A0A7S0IU02_9EUKA1.160e-550.00AP-1 complex subunit gamma n=1 Tax=Calcidiscus lep... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.40.1230coord: 1..55
e-value: 4.0E-15
score: 57.6
IPR008152Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomainPFAMPF02883Alpha_adaptinC2coord: 2..50
e-value: 3.1E-10
score: 40.4
IPR008153Gamma-adaptin ear (GAE) domainPROSITEPS50180GAEcoord: 1..60
score: 20.257355
IPR013041Clathrin adaptor, appendage, Ig-like subdomain superfamilySUPERFAMILY49348Clathrin adaptor appendage domaincoord: 2..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs76264contigH-canaliculatus_M_contigs76264:111..290 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs76264.1.1mRNA_H-canaliculatus_M_contigs76264.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs76264 111..290 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs76264.1.1 ID=prot_H-canaliculatus_M_contigs76264.1.1|Name=mRNA_H-canaliculatus_M_contigs76264.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=60bp
NSDVTGLHFQAAVPKYLRLEMQPASGSVVKARGAGVVEQVVRITNSMQAS
ERGAARGTVS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013041Clathrin_app_Ig-like_sf
IPR008153GAE_dom
IPR008152Clathrin_a/b/g-adaptin_app_Ig