prot_H-canaliculatus_M_contigs7586.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs7586.1.1
Unique Nameprot_H-canaliculatus_M_contigs7586.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length80
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7586.1.1 vs. uniprot
Match: D7FJV0_ECTSI (Ribosome production factor 2 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJV0_ECTSI)

HSP 1 Score: 154 bits (388), Expect = 4.710e-44
Identity = 75/80 (93.75%), Postives = 76/80 (95.00%), Query Frame = 0
Query:    1 MFSKKNDINPMEDETSAEFLMSKNDCPLFLFGSHNKKRPNNLVLGRTFDGHMLDMIELGLVGYRGLGELAGLAKRVGSKP 80
            MFSKKND NPMEDETSAEFLMSKNDC LF FGSHNKKRPNN+VLGRTFDGHMLDMIELGLV YRGLGELAGLAKRVGSKP
Sbjct:   62 MFSKKNDTNPMEDETSAEFLMSKNDCSLFCFGSHNKKRPNNVVLGRTFDGHMLDMIELGLVQYRGLGELAGLAKRVGSKP 141          
BLAST of mRNA_H-canaliculatus_M_contigs7586.1.1 vs. uniprot
Match: A0A835ZC15_9STRA (Ribosome production factor 2 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC15_9STRA)

HSP 1 Score: 120 bits (301), Expect = 1.690e-31
Identity = 54/80 (67.50%), Postives = 65/80 (81.25%), Query Frame = 0
Query:    1 MFSKKNDINPMEDETSAEFLMSKNDCPLFLFGSHNKKRPNNLVLGRTFDGHMLDMIELGLVGYRGLGELAGLAKRVGSKP 80
            M  ++ND+ P +DET  EFL +KND  LFLFGSHNKKRPNN+VLGRTFDGH+LDM+E+G+  YRG+ E  G AKRVGSKP
Sbjct:   62 MLGRRNDLTPFDDETGIEFLTTKNDSSLFLFGSHNKKRPNNIVLGRTFDGHILDMMEMGVTAYRGIDEFRGSAKRVGSKP 141          
BLAST of mRNA_H-canaliculatus_M_contigs7586.1.1 vs. uniprot
Match: A0A7S4DDE5_HETAK (Ribosome production factor 2 homolog (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DDE5_HETAK)

HSP 1 Score: 108 bits (270), Expect = 2.120e-28
Identity = 52/82 (63.41%), Postives = 63/82 (76.83%), Query Frame = 0
Query:    1 MFSKKNDINPMEDETSAEFLMSKNDCPLFLFGSHNKKRPNNLVLGRTFDGHMLDMIELGLVGYRGLGELAG--LAKRVGSKP 80
            MF++ ND+ P EDET  EFL  KNDC LF  GSHNKKRP+NL+LGR FDGH+LDM+ELG+  +  + E+ G  LAKRVGSKP
Sbjct:   64 MFARHNDVQPFEDETKIEFLCGKNDCSLFALGSHNKKRPHNLILGRLFDGHLLDMVELGVADFASV-EMVGAALAKRVGSKP 144          
BLAST of mRNA_H-canaliculatus_M_contigs7586.1.1 vs. uniprot
Match: A0A812ZXI9_SYMMI (Ribosome production factor 2 homolog (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812ZXI9_SYMMI)

HSP 1 Score: 100 bits (250), Expect = 2.140e-25
Identity = 43/79 (54.43%), Postives = 59/79 (74.68%), Query Frame = 0
Query:    2 FSKKNDINPMEDETSAEFLMSKNDCPLFLFGSHNKKRPNNLVLGRTFDGHMLDMIELGLVGYRGLGELAGLAKRVGSKP 80
            FS+KNDI+P +D  S EFL  +NDC  F+ GSH+KKRP+N+++GR +DGH+LDM+ELG+  +RG+       K VGSKP
Sbjct:   11 FSRKNDIHPFDDCNSLEFLCDRNDCSQFIIGSHSKKRPHNMIMGRMYDGHLLDMVELGISSFRGIESFLSRTKAVGSKP 89          
BLAST of mRNA_H-canaliculatus_M_contigs7586.1.1 vs. uniprot
Match: A0A7S2UZD7_9STRA (Ribosome production factor 2 homolog n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZD7_9STRA)

HSP 1 Score: 103 bits (257), Expect = 5.090e-25
Identity = 50/81 (61.73%), Postives = 61/81 (75.31%), Query Frame = 0
Query:    1 MFSKKNDINPMEDETSAEFLMSKNDCPLFLFGSHNKKRPNNLVLGRTFDGHMLDMIELGLVGYRGLGELAGLA-KRVGSKP 80
            M S+ NDI+P EDE+  EFL  KNDC LF FGSHNKKRP+NLVLGRT+DG +LDM ELG+  ++ + E    A KR+GSKP
Sbjct:   64 MLSRNNDIHPFEDESKMEFLCEKNDCSLFAFGSHNKKRPHNLVLGRTYDGRLLDMFELGVEKFKSVVETKAKAPKRIGSKP 144          
BLAST of mRNA_H-canaliculatus_M_contigs7586.1.1 vs. uniprot
Match: A0A2D4BFM4_PYTIN (Ribosome production factor 2 homolog n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BFM4_PYTIN)

HSP 1 Score: 99.8 bits (247), Expect = 2.270e-23
Identity = 49/81 (60.49%), Postives = 58/81 (71.60%), Query Frame = 0
Query:    1 MFSKKNDINPMEDETSAEFLMSKNDCPLFLFGSHNKKRPNNLVLGRTFDGHMLDMIELGLVGYRGLGELAGLAKRV-GSKP 80
            M SKKNDI+P +DET  EFL  KND  LF+ GSH KKRPNNLVLGRTFDGH+LDM+EL    Y+ +      +K+  GSKP
Sbjct:   94 MMSKKNDIHPFDDETKVEFLTQKNDTSLFMVGSHTKKRPNNLVLGRTFDGHILDMMELEFTNYKSIEAFQCKSKKAPGSKP 174          
BLAST of mRNA_H-canaliculatus_M_contigs7586.1.1 vs. uniprot
Match: A0A7S0CNA9_9STRA (Ribosome production factor 2 homolog n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CNA9_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 2.590e-23
Identity = 49/81 (60.49%), Postives = 60/81 (74.07%), Query Frame = 0
Query:    1 MFSKKNDINPMEDETSAEFLMSKNDCPLFLFGSHNKKRPNNLVLGRTFDGHMLDMIELGLVGYRGLGELAGLAK-RVGSKP 80
            + SK NDI P +D +S EFL +KNDC LF   SHNKKRPNNLV+GRTFD  +LDM ELGL+ Y+ L +  G+ K R+GSKP
Sbjct:   74 LLSKNNDIVPFDDASSIEFLSTKNDCCLFGMASHNKKRPNNLVIGRTFDHQILDMAELGLIHYKSLFDYRGMPKKRLGSKP 154          
BLAST of mRNA_H-canaliculatus_M_contigs7586.1.1 vs. uniprot
Match: A0A6I9P565_9TELE (Ribosome production factor 2 homolog n=1 Tax=Notothenia coriiceps TaxID=8208 RepID=A0A6I9P565_9TELE)

HSP 1 Score: 95.1 bits (235), Expect = 6.770e-23
Identity = 45/80 (56.25%), Postives = 53/80 (66.25%), Query Frame = 0
Query:    1 MFSKKNDINPMEDETSAEFLMSKNDCPLFLFGSHNKKRPNNLVLGRTFDGHMLDMIELGLVGYRGLGELAGLAKRVGSKP 80
            ++ KKN   P ED TS EF   K DC LFLFGSHNKKRPNNL+ GR FD H+LDM+ELG+  Y  L E+       G+KP
Sbjct:   40 LYKKKNITRPFEDSTSLEFFSKKTDCSLFLFGSHNKKRPNNLIFGRMFDFHLLDMVELGVEKYVALSEIKNSKCPEGTKP 119          
BLAST of mRNA_H-canaliculatus_M_contigs7586.1.1 vs. uniprot
Match: A0A7S0CL36_9STRA (Ribosome production factor 2 homolog n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CL36_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 9.770e-23
Identity = 49/81 (60.49%), Postives = 60/81 (74.07%), Query Frame = 0
Query:    1 MFSKKNDINPMEDETSAEFLMSKNDCPLFLFGSHNKKRPNNLVLGRTFDGHMLDMIELGLVGYRGLGELAGLAK-RVGSKP 80
            + SK NDI P +D +S EFL +KNDC LF   SHNKKRPNNLV+GRTFD  +LDM ELGL+ Y+ L +  G+ K R+GSKP
Sbjct:   74 LLSKNNDIVPFDDASSIEFLSTKNDCCLFGMASHNKKRPNNLVIGRTFDHQILDMAELGLIHYKSLFDYRGMPKKRLGSKP 154          
BLAST of mRNA_H-canaliculatus_M_contigs7586.1.1 vs. uniprot
Match: UPI001402321C (ribosome production factor 2 homolog n=2 Tax=Amblyraja radiata TaxID=386614 RepID=UPI001402321C)

HSP 1 Score: 97.8 bits (242), Expect = 1.030e-22
Identity = 44/80 (55.00%), Postives = 56/80 (70.00%), Query Frame = 0
Query:    1 MFSKKNDINPMEDETSAEFLMSKNDCPLFLFGSHNKKRPNNLVLGRTFDGHMLDMIELGLVGYRGLGELAGLAKRVGSKP 80
            ++ KKN   P ED+TS EF   K+DC LF+FGSHNKKRP+NL++GR FD H+LDMIELG+  + GL +        GSKP
Sbjct:   62 LYKKKNITRPFEDQTSVEFFSKKSDCSLFMFGSHNKKRPHNLIIGRMFDYHILDMIELGIEKFHGLSDFKNSKSAEGSKP 141          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7586.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJV0_ECTSI4.710e-4493.75Ribosome production factor 2 homolog n=2 Tax=Ectoc... [more]
A0A835ZC15_9STRA1.690e-3167.50Ribosome production factor 2 homolog n=1 Tax=Tribo... [more]
A0A7S4DDE5_HETAK2.120e-2863.41Ribosome production factor 2 homolog (Fragment) n=... [more]
A0A812ZXI9_SYMMI2.140e-2554.43Ribosome production factor 2 homolog (Fragment) n=... [more]
A0A7S2UZD7_9STRA5.090e-2561.73Ribosome production factor 2 homolog n=1 Tax=Fibro... [more]
A0A2D4BFM4_PYTIN2.270e-2360.49Ribosome production factor 2 homolog n=1 Tax=Pythi... [more]
A0A7S0CNA9_9STRA2.590e-2360.49Ribosome production factor 2 homolog n=1 Tax=Probo... [more]
A0A6I9P565_9TELE6.770e-2356.25Ribosome production factor 2 homolog n=1 Tax=Notot... [more]
A0A7S0CL36_9STRA9.770e-2360.49Ribosome production factor 2 homolog n=1 Tax=Probo... [more]
UPI001402321C1.030e-2255.00ribosome production factor 2 homolog n=2 Tax=Ambly... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007109Brix domainPFAMPF04427Brixcoord: 2..80
e-value: 8.7E-10
score: 39.0
IPR007109Brix domainPROSITEPS50833BRIXcoord: 1..80
score: 10.088923
IPR039770Ribosome biogenesis protein Rpf2PANTHERPTHR12728BRIX DOMAIN CONTAINING PROTEINcoord: 1..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs7586contigH-canaliculatus_M_contigs7586:2154..3282 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs7586.1.1mRNA_H-canaliculatus_M_contigs7586.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs7586 2154..3312 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs7586.1.1 ID=prot_H-canaliculatus_M_contigs7586.1.1|Name=mRNA_H-canaliculatus_M_contigs7586.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=80bp
MFSKKNDINPMEDETSAEFLMSKNDCPLFLFGSHNKKRPNNLVLGRTFDG
HMLDMIELGLVGYRGLGELAGLAKRVGSKP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039770Rpf2
IPR007109Brix