prot_H-canaliculatus_F_contig1529.3925.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1529.3925.1
Unique Nameprot_H-canaliculatus_F_contig1529.3925.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length459
Homology
BLAST of mRNA_H-canaliculatus_F_contig1529.3925.1 vs. uniprot
Match: D7G0M5_ECTSI (PPR_long domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0M5_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 4.470e-8
Identity = 47/153 (30.72%), Postives = 69/153 (45.10%), Query Frame = 0
Query:    1 MYSTCIQFMARAQRSREAVLILDRIRKAGLEPDLRCLNFAISACGRSGRWEQALRILRGTEDGGSGENXXXXXXXXXXXGAGKTAADLDVYCWSSAVDACGRAGKWREAVGLVEEMQTEKVGIAPNVITYNAAITACRKGRQCERAVALLRDM 153
            +YS CI  MA+  R  EA+ IL R+ + G  P+  C+N A+ ACG++GR ++AL ++R     G                      +LDV                      + EM+ E  GI PN ITY AAI  C +  + + A +LL +M
Sbjct:  126 VYSKCISRMAKCFRWGEALDILARMAELGAMPNSYCVNAALDACGKAGRVQEALGLMRDARASG---------------------IELDVVSXXXXXXXXXXXXXXXXXXXXIREMEAE-YGIKPNHITYQAAIKVCGRCGKADEAASLLIEM 256          
BLAST of mRNA_H-canaliculatus_F_contig1529.3925.1 vs. uniprot
Match: A0A6H5KUL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUL4_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 6.440e-8
Identity = 47/136 (34.56%), Postives = 67/136 (49.26%), Query Frame = 0
Query:   28 AGLEPDLRCLNFAISACGRSGRWEQALRILRGT-EDGGSGENXXXXXXXXXXXGAGKTAADLDVYCWSSAVDACGRAGK---------WREAVGLVEEMQTEKVGIAPNVITYNAAITACRKGRQCERAVALLRDM 153
            A + PD+   + AI+ACG  G W +AL +LR   E G    N             G+T  + +    +   +  GRA +         W   +GL+EEM+ E  G+AP+V T+  AITAC K  Q ERA+ LL +M
Sbjct:  339 AAVRPDVFSYSAAITACGNCGEWRRALALLRVMREQGVVSYNAAAHACVGDQRKIGETRINGN----NGVAEQRGRAAEEXXXXXEEGWAIVLGLMEEMRAE--GVAPDVFTFTTAITACGKAGQWERALDLLEEM 468          
BLAST of mRNA_H-canaliculatus_F_contig1529.3925.1 vs. uniprot
Match: A0A812P982_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812P982_9DINO)

HSP 1 Score: 64.7 bits (156), Expect = 1.720e-7
Identity = 40/155 (25.81%), Postives = 70/155 (45.16%), Query Frame = 0
Query:    2 YSTCIQFMARAQRSREAVLILDRIRKAGLEPDLRCLNFAISACGRSGRWEQALRILRGTEDGGSGENXXXXXXXXXXXGAGKTAADLDVYCWSSAVDACGRAGKWREAVGLVEEMQTEKVGIAPNVITYNAAITACRKGRQCERAVALLRDMPAR 156
            Y+TC+    R++ ++ A+L+ + + +  + P       AI AC     W+  L +L                           A   + +  +SA+ ACG+AG+WR A+ ++E++   K       +  NA ITAC K R+   A++LL  M +R
Sbjct:   78 YTTCLVACTRSKEAQRALLLFEDMPRLAVRPSEVTFGAAIQACATCAMWQTGLELLG--------------------------AVPQNSFAATSAISACGQAGRWRLAIAILEDLGELK---GTGRVAVNACITACAKSREWAPALSLLVRMASR 203          
BLAST of mRNA_H-canaliculatus_F_contig1529.3925.1 vs. uniprot
Match: D8LMP8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMP8_ECTSI)

HSP 1 Score: 64.7 bits (156), Expect = 2.420e-7
Identity = 45/143 (31.47%), Postives = 66/143 (46.15%), Query Frame = 0
Query:   28 AGLEPDLRCLNFAISACGRSGRWEQALRILRGTEDGGSGENXXXXXXXXXXX-GAGKTAADLDVYCWSSAVDACGRAGK------------WREAVGLVEEMQTEKVGIAPNVITYNAAITACRKGRQCERAVALLRDMPARG 157
            A + PD+   + AI+ACG  G W +AL +LR   + G   N            G  +   +  +   +   +  G A +            W   +GL+EEM+ E  G+AP+V T+  AITAC K  Q ERA+ LL +M   G
Sbjct:   82 AAVRPDVFSYSAAITACGNCGEWRRALALLRVMREQGVPPNVVSYNAAAHACVGDQRKLGETRINGNNGVAEPRGHAAEEEKXXXXXXXEGWALVLGLMEEMRAE--GVAPDVFTFTTAITACGKAGQWERALDLLEEMGGGG 222          
BLAST of mRNA_H-canaliculatus_F_contig1529.3925.1 vs. uniprot
Match: A0A7S4R367_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4R367_9DINO)

HSP 1 Score: 61.2 bits (147), Expect = 2.210e-6
Identity = 27/53 (50.94%), Postives = 40/53 (75.47%), Query Frame = 0
Query:  101 GRAGKWREAVGLVEEMQTEKVGIAPNVITYNAAITACRKGRQCERAVALLRDM 153
            GR  +W+ AVGL+E M+ E  G+ PNVITYNA I+ C+ G+QC +A+ L+++M
Sbjct:   15 GRLRRWQAAVGLLELMRVE--GLQPNVITYNAVISVCKDGQQCAQALLLIKEM 65          
BLAST of mRNA_H-canaliculatus_F_contig1529.3925.1 vs. uniprot
Match: A0A7S2DIN5_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DIN5_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 3.440e-6
Identity = 43/138 (31.16%), Postives = 65/138 (47.10%), Query Frame = 0
Query:   29 GLEPDLRCLNFAISACGRSGRWEQALRILRGTEDGGSGENXXXXXXXXXXXGAGKTAADLDVYCWSSAVDACGRAGK--------WREAVGLVEEM-QTEKVGIAPNVITYNAAITACRKGRQCERAVALLRDMPARG 157
            G+   L   N A+ AC R  + ++AL +L   E                   AGK+ +  DV  +SS + AC RA          WR+++ +++   Q       PN+ TY AA+TAC KGRQ + A++LL +M   G
Sbjct:    2 GIVMGLPAYNSALRACERGAQPDRALALLDRMEAEAQ---------------AGKSCSP-DVRSYSSMIGACARAQSMDNTNGDWWRKSLEVLQRAKQAPSPAARPNLFTYTAAMTACAKGRQSQAALSLLEEMEESG 123          
BLAST of mRNA_H-canaliculatus_F_contig1529.3925.1 vs. uniprot
Match: A0A813KN20_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813KN20_POLGL)

HSP 1 Score: 57.8 bits (138), Expect = 4.950e-6
Identity = 40/133 (30.08%), Postives = 57/133 (42.86%), Query Frame = 0
Query:   31 EPDLRCLNFAISACGRSGRWEQALRILRGTEDGGSGENXXXXXXXXXXXGAGKTAADLDVYCWSSAVDACG-RAGKWREAVGLVEEMQT---------EKVGIAPNVITYNAAITACRKGRQCERAVALLRDM 153
            +PDL     A+SAC + G W  A+ +LR   +                          D    ++ + A   R G W  A+ L+ EM+           +  + PNVITYNAAI+ C KGRQ + A  LLR +
Sbjct:   47 KPDLFLFGAAVSACEKGGHWAGAVALLRELRE---------------------ARLSPDRVVLNAVISAFAQREGGWVWALQLLAEMRKGAPASAAADRRASVEPNVITYNAAISCCEKGRQWQMAFVLLRQL 158          
BLAST of mRNA_H-canaliculatus_F_contig1529.3925.1 vs. uniprot
Match: A0A7S4VMG7_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4VMG7_9DINO)

HSP 1 Score: 60.5 bits (145), Expect = 5.040e-6
Identity = 35/125 (28.00%), Postives = 60/125 (48.00%), Query Frame = 0
Query:    6 IQFMARAQRSREAVLILDRIRKAGLEPDLRCLNFAISACGRSGRWEQALRILRGTEDGGSGENXXXXXXXXXXXGAGKTAADLDVYCWSSAVDACGRAGKWREAVGLVEEMQTEKVGIAPNVITY 130
            ++  AR    ++ + ++  +R AG E D R L  A+ AC R  RW  AL +L   E                       A+  DV  W++ + ACG  G+W +A+ L+E M+  + G+ P++I++
Sbjct:   81 LRHCARRGHWQQTLALIAALRAAGAEIDARVLGLAVGACRRGRRWRWALVLLTAPEX--------------------XXASAADVAAWNAGISACGEDGQWGQALHLLEAMR--RAGLLPDLISH 183          
BLAST of mRNA_H-canaliculatus_F_contig1529.3925.1 vs. uniprot
Match: D7FTF0_ECTSI (PPR_long domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTF0_ECTSI)

HSP 1 Score: 59.3 bits (142), Expect = 8.760e-6
Identity = 39/115 (33.91%), Postives = 58/115 (50.43%), Query Frame = 0
Query:   14 RSREAVLILDRIRKAGLEPDLRCLNFAISACGRSGRWEQALRILRGTEDGGSGENXXXXXXXXXXXGAGKTAADLDVYCWSSAVDACGRAGKWREAVGLVEEMQTEKVGIAPNVI 128
            ++R  +  +  +R  G  P++   N AIS CGR G WE A+ +LR  +   S                G+    +DV  +S+AV AC   G+WR+A+ L+EEMQ    GI P+ I
Sbjct:   82 KARPVLATIAAMRADGFVPNISLYNKAISLCGRQGAWEDAVFLLRDAQRVSS---------------PGQRRG-VDVVTFSAAVAACRDGGEWRQALALMEEMQA--AGIKPDQI 178          
BLAST of mRNA_H-canaliculatus_F_contig1529.3925.1 vs. uniprot
Match: A0A6H5J994_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J994_9PHAE)

HSP 1 Score: 55.8 bits (133), Expect = 2.820e-5
Identity = 28/72 (38.89%), Postives = 43/72 (59.72%), Query Frame = 0
Query:   91 YCWSSAVDACGRAGKWREAVGLVEEMQT-----EKVGIAPNVITYNAAITACRKGRQCERAVALLRDMPARG 157
            YC   A+  CGR G W +A+ L+ + Q      +  G+  +V+TY+AA+ ACR G Q  +A+AL+ +M A G
Sbjct:    5 YCLFQAISLCGRQGGWEDAIFLLRDAQRLSSPGQLRGV--DVVTYSAAVAACRDGGQWRQALALMEEMQAAG 74          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1529.3925.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7G0M5_ECTSI4.470e-830.72PPR_long domain-containing protein n=2 Tax=Ectocar... [more]
A0A6H5KUL4_9PHAE6.440e-834.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A812P982_9DINO1.720e-725.81Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP... [more]
D8LMP8_ECTSI2.420e-731.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S4R367_9DINO2.210e-650.94Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
A0A7S2DIN5_9STRA3.440e-631.16Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A813KN20_POLGL4.950e-630.08Hypothetical protein (Fragment) n=1 Tax=Polarella ... [more]
A0A7S4VMG7_9DINO5.040e-628.00Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
D7FTF0_ECTSI8.760e-633.91PPR_long domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5J994_9PHAE2.820e-538.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 245..406
e-value: 3.7E-38
score: 133.6
coord: 79..222
e-value: 1.4E-34
score: 121.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..69
e-value: 3.9E-11
score: 44.6
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 283..330
e-value: 1.1E-8
score: 35.1
coord: 125..172
e-value: 2.2E-10
score: 40.6
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 357..383
e-value: 4.0E-6
score: 26.7
coord: 39..58
e-value: 0.4
score: 11.0
coord: 92..119
e-value: 3.9E-5
score: 23.6
coord: 413..443
e-value: 0.0049
score: 17.0
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 128..162
e-value: 6.9E-6
score: 23.9
coord: 321..355
e-value: 5.3E-5
score: 21.1
coord: 91..121
e-value: 2.2E-5
score: 22.3
coord: 358..384
e-value: 2.7E-5
score: 22.0
coord: 164..196
e-value: 3.6E-6
score: 24.8
coord: 288..319
e-value: 7.5E-5
score: 20.7
coord: 1..33
e-value: 0.0017
score: 16.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1..32
score: 8.353
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 284..318
score: 10.457
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 354..388
score: 10.205
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 126..160
score: 10.939
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 411..445
score: 9.525
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 89..123
score: 10.095
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 33..67
score: 7.739
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 161..195
score: 11.707
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 319..353
score: 10.939
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 358..444
coord: 88..208
coord: 1..60
coord: 265..382

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1529contigH-canaliculatus_F_contig1529:23102..24669 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1529.3925.1mRNA_H-canaliculatus_F_contig1529.3925.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1529 22279..25090 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1529.3925.1 ID=prot_H-canaliculatus_F_contig1529.3925.1|Name=mRNA_H-canaliculatus_F_contig1529.3925.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=459bp
MYSTCIQFMARAQRSREAVLILDRIRKAGLEPDLRCLNFAISACGRSGRW
EQALRILRGTEDGGSGENGAAGNGAVAGSGAGKTAADLDVYCWSSAVDAC
GRAGKWREAVGLVEEMQTEKVGIAPNVITYNAAITACRKGRQCERAVALL
RDMPARGVSPNVASYSSAISALGDAGRWEEAVSLFREIPSVGLAPDMMSF
TATISACAGIPRSRRALPQGQTRGPVRGSGGSASNIGGGRFAPPSTVRGE
ASAATLPSGRRREPWEEALALLGEMLPSAGVSPNVFHFNAAVSACAACGR
WEEAVSLLGEMERASVAADVVTYSAAIAACGNGLQFERAVALLREMPAKG
VRPNAFHYNAAISACAKCGRYESALGLLREMWEMSAREEGGEEEGKVAAG
GERKTARITPDAFSYSSAITACKNGNNLERASELKREMKERGITGGGALM
VSLLSEIP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf