prot_H-canaliculatus_F_contig1516.3859.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1516.3859.1
Unique Nameprot_H-canaliculatus_F_contig1516.3859.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length176
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1516.3859.1 vs. uniprot
Match: D8LQL5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQL5_ECTSI)

HSP 1 Score: 231 bits (590), Expect = 4.290e-75
Identity = 125/179 (69.83%), Postives = 137/179 (76.54%), Query Frame = 0 
Query:    1 MPGPNIKWTAGPGPAPLPYSKRAREAMGVNDDDKPWAHPDPPTLETWGLGGAGDGGGGESNRDALTEGRLQTNFLMIVLFIIAAIWMYRKFVKRDRTPFFYVPPTA--SDDVKVREDVRTAREARLKRFHETKTSYADMMKEAAGGWTP------DDADGETEIATAEGSPEGLRRRWG 171
            M GP+IKWTAGPGPAPLPYSKRAREAMGV DDDKPWAHPDPP  E+WG GG     GGES  D LTEGRL+TNF +IVL II AIW+YRK VKRD +PFF+V PT   S+DVKV ED+RTAREARLKRF ETKTSYADMMKEAAGG  P      DD  G +  A  +G  +GLRRR G
Sbjct:    1 MAGPDIKWTAGPGPAPLPYSKRAREAMGVTDDDKPWAHPDPPAAESWGFGG-----GGES--DTLTEGRLRTNFFLIVLSIIFAIWVYRKVVKRDHSPFFHVSPTPPQSEDVKVSEDMRTAREARLKRFQETKTSYADMMKEAAGGCPPAETVRNDDDGGNSVAAEGQGYSDGLRRRGG 172
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1516.3859.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQL5_ECTSI4.290e-7569.83Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 89..175
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 70..88
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..69
NoneNo IPR availableTMHMMTMhelixcoord: 70..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1516contigH-canaliculatus_F_contig1516:651..18092 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1516.3859.1mRNA_H-canaliculatus_F_contig1516.3859.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1516 651..18092 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1516.3859.1 ID=prot_H-canaliculatus_F_contig1516.3859.1|Name=mRNA_H-canaliculatus_F_contig1516.3859.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=176bp
MPGPNIKWTAGPGPAPLPYSKRAREAMGVNDDDKPWAHPDPPTLETWGLG
GAGDGGGGESNRDALTEGRLQTNFLMIVLFIIAAIWMYRKFVKRDRTPFF
YVPPTASDDVKVREDVRTAREARLKRFHETKTSYADMMKEAAGGWTPDDA
DGETEIATAEGSPEGLRRRWGNLAD*
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