|
|
Homology
BLAST of mRNA_H-canaliculatus_F_contig1516.3859.1 vs. uniprot
Match: D8LQL5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQL5_ECTSI) HSP 1 Score: 231 bits (590), Expect = 4.290e-75 Identity = 125/179 (69.83%), Postives = 137/179 (76.54%), Query Frame = 1
Query: 1 MPGPNIKWTAGPGPAPLPYSKRAREAMGVNDDDKPWAHPDPPTLETWGLGGAGDGGGGESNRDALTEGRLQTNFLMIVLFIIAAIWMYRKFVKRDRTPFFYVPPTA--SDDVKVREDVRTAREARLKRFHETKTSYADMMKEAAGGWTP------DDADGETEIATAEGSPEGLRRRWG 513
M GP+IKWTAGPGPAPLPYSKRAREAMGV DDDKPWAHPDPP E+WG GG GGES D LTEGRL+TNF +IVL II AIW+YRK VKRD +PFF+V PT S+DVKV ED+RTAREARLKRF ETKTSYADMMKEAAGG P DD G + A +G +GLRRR G
Sbjct: 1 MAGPDIKWTAGPGPAPLPYSKRAREAMGVTDDDKPWAHPDPPAAESWGFGG-----GGES--DTLTEGRLRTNFFLIVLSIIFAIWVYRKVVKRDHSPFFHVSPTPPQSEDVKVSEDMRTAREARLKRFQETKTSYADMMKEAAGGCPPAETVRNDDDGGNSVAAEGQGYSDGLRRRGG 172
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | expressed unknown protein |
| Ec32 ortholog | Ec-10_006120.1 |
| Exons | 3 |
| Model size | 528 |
| Cds size | 528 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622929257.202903-CDS-H-canaliculatus_F_contig1516:650..839 | 1622929257.202903-CDS-H-canaliculatus_F_contig1516:650..839 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1516 651..839 - |
| 1696845739.2457526-CDS-H-canaliculatus_F_contig1516:650..839 | 1696845739.2457526-CDS-H-canaliculatus_F_contig1516:650..839 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1516 651..839 - |
| 1622929257.2151926-CDS-H-canaliculatus_F_contig1516:12060..12303 | 1622929257.2151926-CDS-H-canaliculatus_F_contig1516:12060..12303 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1516 12061..12303 - |
| 1696845739.254825-CDS-H-canaliculatus_F_contig1516:12060..12303 | 1696845739.254825-CDS-H-canaliculatus_F_contig1516:12060..12303 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1516 12061..12303 - |
| 1622929257.2258577-CDS-H-canaliculatus_F_contig1516:17996..18092 | 1622929257.2258577-CDS-H-canaliculatus_F_contig1516:17996..18092 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1516 17997..18092 - |
| 1696845739.264007-CDS-H-canaliculatus_F_contig1516:17996..18092 | 1696845739.264007-CDS-H-canaliculatus_F_contig1516:17996..18092 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1516 17997..18092 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1516.3859.1 >prot_H-canaliculatus_F_contig1516.3859.1 ID=prot_H-canaliculatus_F_contig1516.3859.1|Name=mRNA_H-canaliculatus_F_contig1516.3859.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=176bp
MPGPNIKWTAGPGPAPLPYSKRAREAMGVNDDDKPWAHPDPPTLETWGLG
GAGDGGGGESNRDALTEGRLQTNFLMIVLFIIAAIWMYRKFVKRDRTPFF
YVPPTASDDVKVREDVRTAREARLKRFHETKTSYADMMKEAAGGWTPDDA
DGETEIATAEGSPEGLRRRWGNLAD* back to topmRNA from alignment at H-canaliculatus_F_contig1516:651..18092- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-canaliculatus_F_contig1516.3859.1 ID=mRNA_H-canaliculatus_F_contig1516.3859.1|Name=mRNA_H-canaliculatus_F_contig1516.3859.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=17442bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1516:651..18092- (Hapterophycus canaliculatus Oshoro5f female)
ATGCCTGGTCCAAACATCAAGTGGACGGCTGGTCCTGGCCCTGCACCACT
GCCATATTCAAAGCGGGCGAGAGAAGCTATGGGTGTCAACGACGATGTAA
GGGCACTTGCTGTTGAACCGCTGTGACGCTGTAACGGGAGGGGCATTTTT
CGGTGGGCCGCTGTATCCTGGTGTAAGCAACTTTTGTAGCCGGTACAGAG
AGCTGACAAATCTTGGTGGTCGCAGGTAGCTTGCCAGGTGCCCTGCTGCG
GTTGGCGTCGAAATCTTGTAGTCTATAACCTACTTTCAAGTTATGTAAAA
CCCGTAACCGCGTTTTCTTTCGCAACTTCGCTCCTTCTGAAGTACTCCGA
GTATTAGTCAGTTTCGGATTTTCGCGTTCGATTTCAAGCTGAGATTAACC
CGTACCAGGTATGCGCGAAGTACCTTCCCACTTGAACGACCAGCTCGGTG
GAATAGGATTACCGACGGAAATTCCCAGAACTTCAAAATTGCAGTTCAAA
TTTGCACAAATCACTGCGAGTCATGTTCATTTCCTTCAGAAAATTTCATA
GAGCCGCTGGTTGTTGCACAAGGTAGCGACCATGAACCACAGTCTGCCCG
AGAGGCTTGTGGTTGGCCAAAGTGCTGCCGATGTGCTCGTAGGGCAGCGG
AGGTCCTTGAAAAGAATCCACATCGACGTGAAGCCTACACATCCCATATA
TGATACGGTGCAGCCTAGGGAGGAGGTCAAAAGCCCCCACAGGGCACCGC
CTTGCTCAGTTCCCGCGATTCGTCTGACCTCCAACGGCTCGCACCCATAC
ATTCTCCTCGGAGGTCTAAAAATGACTAACGACGCTGCCGTGGCTACTGA
TAATGGGAGGCTTGGGAACTACTGTTATCCCTTGCCCTCCTCTCGGCAAA
GCCACACCGAGGAAGGAAGCGCCGGGCTATCGCATACCATATACAGAGAG
AGATGACCGCGTTGGAGGGATATCGCTGGTATGCATGAAGGATAGCGTAT
GTTTTTGGCCATCGAAGATTGACGTATGGCCGCGGCAGCTGTGAGGCAGT
CATGGAGGAAGTTTGAACGTATGGCATCGTGATCAACCAACTTCAGGGCG
AAGACCTGTTGTTCGTGTTGTTGTGTGTGTATTGAAGGGAGAGAGGAAGC
TCTCTCGTGTAAGGGACCAATAAGTTCGCTTTTCCGAAAAGCCGAGACCC
CTCGGCTCCCAGGGGGTGTCGTTGCGGGCGATGCCACCACAGGAACTTCG
AATTTGAAATTTACGCTAGCGCATGGCGGAGGAACTTGAGACTTCAATAC
GTTCATTATGTCGAGACCGACGGGACACGGGCTAGTGAAATATTCGTGAG
CGCATACAGGTTATTCTTGGAGGCTCAGATTATTCCGACAAGTAGCCGGT
AACAGAAACCATAGAATAAGCCACCGCCGCGCATACAACCTTGGCTTAGA
TTTTTTGGCCCTCCGAGCATCAAAAACTCTAACGCAAGAGCGCCGCTGGG
ACGTACCCTAGATTCTGCCACAAACTTGAGCGATATGCATCAGCACAGAG
AGATAGATGAAGATGTGGGCTTCAACAAAGACAGGCAGCGATGCACAACT
GAGAGACGGATGAGATGCCTACTTTACCGTGCTCGTTCTTGTCAGCACCT
ATGCTCTGACAGCAGCAGCAACAGCAGTGTAGCTCCTTCACTTCGATCCA
AACACCGGATTTTTCCAGGTTGCAGCAAAACATGAAGGATGTAGCAGCGC
GTCCCATTCTGTCTGTGTGGCGTGTGCGATGAAGGAGATCAGCGACTGGA
AGGAAATGGTGGGAGAGGCACTGCTGTCTCTGCTGTCTTTGCTGCCTGGC
ACATCAAGCTGTGTGTGCGTCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG
CTGCTTCTGCTTGATGCTGTTAAGCTTGCTGCTCTTCTCGTTGTGACCGT
CTCTCTCTTATTGCGACGCAAGGGAGGTGTCCACTGTCTCCAGCGTAGCG
CTGCAGCGGCGGCATACTATCACACAGTAGACATGAAGCCCTGGCCTCAT
GTCCCCTAGGGGCGGCTACTTTGTCCTCTACCAGCCCTCACTCGCCCTCG
AGTTCAAGGCGCTCGATGTTTCACTTTGTCTCTCCGCCGCTCCGCCGCGT
CCGGAACAAATCTATGGCTTTTCGGTTTTCTACTGAAACCTAAATTTCAA
GCAGCAGGAATCAGGAGCAAAAATCTTACGTAACAATCTAAGCAAAATAC
AAACATTTCCGAATCTGTCTATTTTCCGTTCGGGAGGGAATGCACTCTGA
GGTATCCACCGTCCCCATGTGCTGGTTTGAGTGCCGCACGGTATGGATGA
TCATTCCTCCGCAGATTTTTATTAGACCCGTGGCCAAAAACGGGTATAAT
CCGTCGATCTGTGGCCAAAACCGGGTAACCCTGTGAATCGAAGTCAAATG
TTGTACTCTACGAGTCGTTCTTATCGACAGTACAGAATTGTGTTTCGAAA
TCACATTTGGATTTCAAAAAGTGTATGCTATGATCAGATTTTTTAGGACA
CGTAGGCCCCCCCACCCTCTCCCATCAAAAGCTCGAGATATCGATCATTG
TTTAGAAAGGAATTAGTGTACGGGGGCCCGGCTCAGGACAAAATGCCACC
CATCCTCCCATCAACTGCGGGCCCTCCTTAGAAAACCATATGGACTATAG
TATACCCCCCCCCCCCCTTACAACCCACCCCCCCCTCGAAACGGCTAAGT
TTCGATCTTGGGGCCTATGTGTCCTGAAATCCGATCCTACCAGACCCTTG
GGTTTAAGTCATAAAGAGTCACGGAACTTGAATGTGATTTACTTTTCGGT
CTTATGGAAGACGGGAGTAAATGACGTTTCGTTTTGAAATCCATAACGGC
CACCTGACGACCACCTGAGGGCCACGCAACAGCGGAGCAACCTCTTATGG
GACGTGAATATGACTGATGGTCGTGGTGGCCGACGCGAAGTCGCCGAACA
CCTGCGATGAAAGGATTAGTCACCTCCTCTACTCTGCCTTGCTTTCAGTC
TACGCCGTATGGTCCGGGGTATCGTAGGGCAGGAGCGGTGGTCAACCGCA
GATTCATGTGGCGGTGGGAATTTCAGTTTTACAGCACCTGAGATAATCAT
CGCTACAAGCAATGTCGCGACCCCGGGTCTTTTGCACTCGCACTCTACAT
GCATGCTCTCTATAGCTAAGCCGATTTCCGGGTCAAACGAGTCATCTGAC
GGCCGCATGCTGCATAGCCCAAGGGCTAGGTTCAGAGCGGCGAGACACTA
CACATGTCCTTCAGGCTGCTCGTGCATCTTTGTTCGTTTTCGCCAAGTAT
TTACGAGTGTAAGTGTTTTCGCGTTTTCGTCAACTATGAATCTGAAATGA
TGATTTCAGCTTTATTTCGGATTCATAGTTGGCGAGCGGAAATCCTTGTT
TAGTTATGAAGGTTCTAATCCGCTGGGCGGATGGACTGGGACGAGAGGTC
ATTTTGACCAACCAAAAGGAATGCTCTGTGGTTATTTACGACTGAAACCC
GAATGTGGTTTTCGAAGCCGAATCTGTTCCTCTCGATAAGACCGACTCTA
ATTGGCCAACGCAGGCCACCACCCGACCTTCGGCGCATTTCCGCCGGGTA
GACCCGATTGTGGCTATTCATCGCCTGAAAGGTACCCGACTCCCACACCC
CTACACCCGAAAATGGCTATGGATATACAGTCTCTTCGACCAACGGCCTA
CACACGCATCACCAGGACTGAGACTTTGAGCCACCACCACAGCGACGGCT
GCATGCGGCCAGTGTGTGGCAGCACCTCCGTTTGAACGTAGCCCCTTTTT
TTCAGTTCTCTCTCTCTTGCCTCTACCAGCACATCTCTCCCTCTCTCTTT
CATCTGCAAGGGCTGGTAAGACACAAAGAGCTGCAACCACTGTCATACGC
CGCCGTGGGAGACGACAGTTATCTAGCATGACGAAGGTCTTTCTGTCGAG
TCACCGTCGATAGCTTCCAGGCAAAGGAAACCGCTATTTCACCGCGATTG
CCGTGAGACACAATTAACTGCAAGCTACCGGAAGCCAAAGTACAAGTTCA
TCCCCTGCTGCTGTGTGCTGCTGTTTGTTGTTTCGAGTGTTATCTTGGCT
CTCTCGGAGGAAAGACAGACACCATCTGACGAGAGACGACACGCAAAAAA
AAAAAAAAGGGTCTCCGCTCGAGCGGATCTTGACACGCATGCGTGGCCAC
ACACCAGCCGCATGCAGCCGTCGCCGCCAGTGGCTGAGAGTTTCACAGTC
CTGGTGACGCGTGTGTAGGCTGTTGGTCGAAGAGAAGGTATATACATGGC
CATTTTTGGGTGTAAGTGTGTGGAAGTCGTGTATCCTCCGGGCGATGAAC
AGCCACAATCGGATCTACCCGGCGGAAATGTGGCCAAGGTCGATGGTGGC
CTGCTTTGGCGAATGAGATTACACGAATTGACTTCGATACACAGGGGTAC
CCGGTTTGGGCCACATATCGACCGGGTATACCCGTTTTGGCCACTGATAT
TGTAATTATTTACTTAGTCCGATTTTCTGTAGGCGCATGCGACTATTTTG
CAACAGCTCCCGCGATGGTGACGATTCAAACTGAAAGATTTTGCCCTTTG
TTCTTTAGGCATACACCTGATAAGTCGAGTATTGACCGTCTTCTTCTGTG
ATCCCGGAGTTAGAACATATCTGGTATACCGCAAAGGCGTAGATCAATCC
ACGAACAATGGGATGGGAGCAAACAGCCCCCCCACTTGCTAAGCTCAGAC
CACTGACTATATACAAAGTAAACGGTGGTCCTGACCATGCCTGAGCCTCT
GGAATCTTGTATGACCAGGAGTCTTCAATTTTCGGGAGAAGTTGCTTCGA
GGGAGAAAGTTGACAGCCTCTCTTTCGCAGCCTTCAATAAGCGAGTTTGC
GGAACTGCAGATATCGATGAACCGACCACACCGGTAGGACTGGCAACTGA
CGGAAACACGACAATCAAATTTGCATGAGCTGCGCAATTATGGGATGCAA
ATTTGATCCAAGCATGAAGAGCCTGATGGTCGTTGCAAACGACACAATAG
AGTACCGTGGTTGGCCAAGGTGCCCAGACGAGGGATAGCGTTGGTCAAGA
TTATTTTGGCATGGGTGCATCGTCAAGAAGAGCGCATCACGCAAGTTAGA
TCCAGCGGTGCATGCATGAGCAAGTGTCGGGCGGATGTGTCGCCTCTATC
GATGAGTGCCTGTACTACGCTGAATCTTCCCTGCAAGAGGCCATGGTGGA
GAGTGAATGAAAGGCGGCCAACTTGCTCCAAGTTGCGAAAACACAACACT
CATTCCGTTCAAAACATGTTCACAGCATGGTAAATTTTAAGAAATTCTGG
CGCAAAAGCTGTTTAAGGGTATGTGGAATAATTTCCTTGAGGTATTCTAC
TCGTTTTACAATGAGGAGTTCTAATGAAAGCAACAACCCCAGGAGGTTCC
GGAGACTTAGTTGCGACTCATCCAACTTCTGCGCAAATTGTCTCCCTCGT
GTGTGGAGAAGTTTAAATGAGATGCGGATTGGAAAGGTCAAGCCACGGGT
GCATAGAGTTGGCTAAATATCGTTCGCCGCCTACCGTTGCGCTCGTTGGT
TTGCGGCTACCTTTTTTCCCATTGCCGGTCGGCGCACCGCAGATGAACTT
CGTTTTACCTTCCCTTATTTCGAGTTTATTTTCTACCCACCGTCGCTGAA
TGTCCTCCTTTCCGTTGATTTCTACGTGCCCCCCAAAAGGATAAGCCTTG
GGCGCACCCAGACCCACCCACGTTAGAGACCTGGGGACTTGGTGGCGCCG
GCGACGGCGGTGGCGGCGAGAGCAACCGTGATGCGCTTACAGAAGGGAGG
CTTCAGACCAACTTCCTTATGATCGTGCTGTTCATTATTGCCGCCATCTG
GATGTATCGAAAATTCGTCAAGAGAGATCGGACACCCTTTTTCTACGTGC
CTCCAACAGCGTCGGATGATGTAAAGGTAAGGGTACCCATTTAGTGTCAA
TCTTGCAAAGCAGCACGTGCGATGGATGATGTGGTAGTTGTCACTATGGC
CACTCGGGCGGGGTATCATGTCGGGTGCACTAGGAATATTTTTAAAGAAA
ACATAACAACATCGTTAGAACACCTCCTGGGGTACGTCGTGTGAGGCGTA
CCCCGAGGCTTCTGTTGAGTTTTAAACAGTGAGGGTTCATTGATGAGGAT
AAAAGCACGAACAGGACAGGGTAAAAATAACCAATAAGTGACTCCGCCAA
TCTGTACAAGGGGTTTTAATTAACCGCAAGTAAGTGCGAGTAATGATGAG
ATATCACGAATGAACAAAGAGTTAAAACGAGATACAACGAGTAATCAAAG
GATAAATAGTGATGTATCACGAATAATCAAGTGTTATCAGTATAGATTTA
TCATAATTATATGTGTATTATAAGATCTAAATGTTTATCCCAAGATGTAC
GGTTGGGTTACCATCGGAAAGATGGTAAAATCCGCGTTTGCGCGCGGCCC
AATGGGCACGCTGACCGGACTTCAACCATGTGACCTCAAATAACGCATGT
GAAACATACGCTACACCGTGCGCATGGTGTTGTCCAATGAAACAGATATT
TTCATTGAAGGTGAGCTGCTTTGGCGATGAGATTCGTCTGTTTACCTTCA
GCCTGTGTCGGCACGGTTGCCTTCTTTGTTCCACTCTTCTTCCGCAGGAA
AGTACTTTCTCTGCCTTCTCTCCCTCTCTCTCTCTCTCCCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTATCCTGATC
GTGTTCGAGTGCCGCGGCTTCTTCAGACGATGAGCTCGAGCGTGCACCGT
GCACCGGATGTGAAATCTTACAGTAGACAGACTTCATCGCTCCACCTAAT
CATTTCTGTATCTCTCTGGTAACAATGGACATACGGTAAGCCGCCTCAGA
TGTTGCTCTTTAGTCGTGTTATACTCGAAGTAGTCAGCCGTGCGATAGGT
CGTAGCCGGTTATTGACGACTTTCCCAAAGCACCGTCACACGCGGGCAAA
ACTTGGCGTGAAAGAATAATATGAGTCCGCTTCCTTGGATAACCGGATAA
GTACAGGGGCCGCAACACAGCTAAGCCGCCAGATAATTTCCACCTTTCCT
GGCCCTTTCGTACGGGCCCAATAGGGGTTTAGATAACCAGCCAGCTGTTC
ATGTCTATCCGTTAAGCTTGCGAATAGGCAGAAAAACATGTAGGAAAAAA
ATTAGAAGTGCCTCTGATCTTCCAGCTGGAAATTCGACCCAGCCAAGGAG
ATTGCATGAAACAGTCCGAAAGAACTCCAGACACAACCCACCTGACGCGT
CCGCGCGAGCACGCGAGGTCCCGGACACTTGCTCTACCCTGCCATACTGC
TGCAACACAGCACCTTACAGCCGTTGCGCGATCCGCACTGTAGCACACAT
GTCTGACCAGACATCCGTTGCCCGCTCCGCCTTCAGCTCCTCGTCTTTCT
CACGTGCGAGATATTCGGCCATGCCGCAGTCTCTGTTCCTTGTTTCGTGT
GCTTTCGATTAATTTCCGCTTCACTTCGTCGAGAGCTTTCTGCGCGACGG
CGAGGCCGCCCCTTTCGATCGCGCGCTCTGTGTCCTATGCGCCGGCGGCG
GTGTATGCGGAGTGCCCCTCCCTCTCTGTGCACTTATCGTGTTTACCTGA
TATCATTTTTAGTCTGATGCTGCTGAACGTGGCTCTCCTTTTTCTTTTGT
GCTGTGGGTCGGGGGTGAGTGCTGCACACCCGCTTGAGGGGCCATTTTCA
GGCACGTGGATCTCGTTATTGGCTTGTGCGATACTAGTTATTTTGCGTCT
TGTAACTCAACAATAAGGCGCTGCACTACAATCTCGCTTTTTCAAGAAAA
CCAAAAGCGGCCTTGCATGTGGGCCATCAAGCTGAAATGTCGAAGTTTTT
CTGTGTTGTGCTATCGCCCTCTAAACGCAAGTACAAAACGAGAATGCAGT
AACCTCCACAGCACCTGCGGTCAGGCGCGTGTAAAGCAAGGGCCAAACTG
TTGCCTGGGTGCAGGTCTTCGTGCGCAAGTGATAAGTCTGAGCAGCGACA
TTTTCAAGAGCAAAAAACAGCTGAAATTTCCCTGCCCCGTCCCAAATTTC
TCGAACAGACCGGTCACTTTTTTGCCCTCAAAGTCCGCCCGATTCGCGAT
GAAACATTTTTGGTGAAAGGAAAGGATACGACTCACACCTTGTCATGCCT
CGAGGACAAACTTCATATGCGTGGGCAGTATGAGATCAGGTTTGCATTCC
CAAGAGACAAGGAAGAGAGGGCGTGGAGGCACACAAAGAGCCCCGGGTTT
TATCCCAGGAATTCACTGTACTGTAATATCCACCCTCTTCATACCTCCTA
CACTATCGAGACTTGAATCTGACAAAAAATCATAAGTGATACGAGAACAA
TGCTTGATGGAAGACATCGGCTAAAGTTTCAAGCAACCAAAGTCTACAGG
GCCACTTCGACCTGAACGTTTAGTAAGGGGTGTCAAAACGCAGTAGAATG
TTTGTCCCACAAGACCAAGCGGCACACACATTCCAGTTTGTCCACTTGGC
TTCTGTCCTGACAAGATAGCTTCGAAGAATTTTGGCGCTGAACTCTTGTA
ACCGAAATCTTGGCACCATTTAGAGCCAATTTCGCAGTTTCTTTCCTTCC
GAAGTGTAATTTTCAGTCTTGGCGTGGACGAGGTCTGGGAAGGATCGCAC
TGGCGCAATACGAGAAAAGCGACACCAGCCCCTACCGTCTCTGCTCTAGT
ATCCTGGGATCCTTCCCATGCTAAGCCGCCAAGGCCCAAGCAACTGCCGT
TTCGGACCGCCTAGACCTCAATCGTAAATACCGTTAACATCCACCAACAT
CAAGTTGGTTCGTGGCGGCATTTGATTGCTGCCCCGCCCTGTCCTCTCGC
ATGCCTGCTCTCTGCGTCCTGCCTCACTTCCCTTCGCTAGTAGTCTGAAT
CCTCCGTATAATTCCGTCTGTAACCTTGAGTGTAGTCGAAGCCTCCTTCC
TCTACCTTCTCTCTGAATAGCCTTCTCTGGTCTCCCTCCTCCCGCTGCCA
GCGTAGTGTCTGCACCGATGCGCAGTGAGTGCAGGCCCACTTGCTTCGGT
TTCCTCCCGCTTGTTCCACCATCTTGCGGAGGGCCTTCAGTGCCCTGAGT
CCCCCACGCCTTTACTTCATTGCCACAACGGCATGAGCAGAGGGGTGCAG
TCTCAGGCAGCGCGAGATAGCTCATATGAGCGCCACGGAAAGGGCTACGG
CGCCACCGCTGTCGCCTGCTTGAGCCCGCTTACCTCGTCTTACGTTCGGG
ACAACTATGATCGGTTTGATCTTCTTTTTTGCTCCGGAACACTGCCTCTG
CCGATTTGGTACGATGCCATTGGAGCGACGTGAGTCGTCGCTCTCCTTCG
AAAAACGGGACGTCGTCGCGGCCTAGGTAATGCGCGCGGTGAATGTCGGC
CGCGGACATCGCGAGAATCTCGTCCAACCGTGCCACCAGAAAAACGTCAC
GCCAAACGCAACCAGCCCACGTGGCCACCCATGCCCCACGAGGGCACCAG
GTGCTGTCCGCTCAGTAAGGTGACCCACGCCACCATTAACCGCACCCGCT
GTTTGCTCCCACACCGTACGTGTGCCCTCTCAACACCCTTGAGAGCATGG
TTGATCAGTGTTGAGGTCTTCGGCCGATCTATTTGCCTGTTCCCTCTGTG
ACAGGACTGTACGGTGGCTAGTTTGGTCGAAATGGTTGGTCCCAAATTCC
CCATTTCCGACGGACACCTCGCGACGAACTTCCCAAAGCCTTTTCCAGAA
ACGTTCCGAACACGACCAACAGGCGACCTCTGCTCGACGCGATCCCCCGT
ACGATCTTGGAACGCCACGCCCACTCCTCGGTGCAGCAATGTGCGCCGCC
AGTCACCCTCGAGGGAGGTCACACCACGGCGGCCATGACCATGCAATGGG
TTGATACCTGGTGCAAACGAGGTGGTCATCTCATCCGAACGTGCGACCAG
AACAAAATTCCAACAGACGAAATCGGCGTACGCGACCACCTGGCTCCAAG
AGACATCAAAGTACTGCCCGCTCCTAAAGATCACTCGTGCCACCCGCAAC
TGTACCCGTTTCGTAGTACCGTATCGTAAAGGAGCGCTCTCAACGCCATA
CGAGAATGATCAACGGCGACGCCGTTCGTAAATCCACAGGTCTTCCACTT
CATAAGCTTACACGGCAGCAAAGCTGCTGACATCATTCATGCCACGATAC
TCGCTGAAGGATCACGCCACAAACGCCAGCAGAGCCTACGGCACAATGCC
CGGCGTCGTCTTCGACTCCAAGGGTTCCGCACTCATAAGGTTGTCGCACT
CACCACCATCCTAGGGAAGGTGCGCCAAGCCCGACAACCCAACAGGCAAT
TTCTGAAAAGCCACCGCAATGAACGACGGACGCGCTTGCGTCCGAAATTC
ACGTACCAGGCTAGACTGCCACCGGCCCCACGACCTGAAGCTACATCCGT
TCAAGTGCCGAGTGACAGCCTTTCCGTTCTAGGACCCCATCCATGCCTGA
TAGTACTCAAGGCCGACCATTAAGGAAGACAGCACAGGTGGACGGGAGCT
CTCCTTAGGAGGTGTGCGCCTGTGTCGTCCTTACGATGCCTCAGACAAGG
TAGGACAGCCCGAAGGCCGTCCAAATCCCGACCTTAGAACCACCCTAGGA
AGTTGTTCACCTTACCAAGGTGTTGCTAAGCATCCTTTAGGCATCCCACC
ACTGGCTAAGGGGAGCTCCCGTCCACCTGTGAAGCCGCTGGCCGAGTGAC
TCCGCCTACATTCTTGTCGCCGATACGACACCCCACTTCCCAAATCACCA
TCAGGACGAAATTCGAACTACTTACTCTCTTCTTTGTGTGTTCCACTAAT
ACGTGCACGAAACCCGCCCGCGGCGACCACACCCGCAACATCAATAAAGC
ACCCGGCGGCCGATGTATTGCACAGACCGTGACAACCTCTGTCCCGAATG
CCAACGCATTTGGCCGCGCGGGCCGTGGGGCATTGAATAGACAGGAAAAC
CAATGTAATATCAAACACAGGCCGTAATATTTATGGAAACTCCATCGCCC
CTTCGTCGGGAGAAGTACAGCCTAGATCTCGGCCAAGAGAAAAGACATCC
GCGAACACTAAGGCTGGACTGAAGCCCACACGTCCATTATTGTAGCGGGA
TTCTGCACCGAATGGGCCCACTCGCCTCGGTGACTACCGTTTGGCACAGC
CGTCGCTAAATCCTTAGAACCAGCAACCTGTACGTCGGTCCCGAGTCCGA
CACTGCGCGCGACGTCGGCGGCTCGATCGAAACGCTTCAGTCGACCAAGG
CGAGAAACTAAAGGACTTTGGCACCCGCCAGTGATCCTCCAAACCCGGCG
CCACCTTCCGCGAAGGAAAAACGGCTCGGTACCCCCGTCACCGAGACACA
CTGGCGATTCACTGTCCGCCGGTGGCTTGGGGTATTTTCCGCTATCGCCA
GCACCGCTTGGCCACCCGTTTCGTATGCTGCCGATCGCCGCCCTTCGCTC
GAGATTCCTGTAGATACCTCTTTTGTCACACGATCTCGGGTGTCCCCGGG
AAACGAGTACGGGAGCATTGAATGAGGGTGCGCAACTTATATTCCGCGAG
CGTGTAAGGGGGGCGCGACGGATGCATGCACTCGCATACAGGAATACCCT
GCGATAGTCACTCTGGCTTGCGTCGGCTTTCCGATGAACCAAGTTGGAGC
GTTTGCACCGATATTTTCCTTCGGCGGGGCGTGTTTGCATTGGCAAGCAA
GTCCGATATACTAAAGCCACCACTTGCCGCACCAGCTGGCACCGGTGGGA
TGTTGGTGCGCCGGCACCAATGTGAATTGAAAAGACGTAGATACGTGGAT
CCACTCGTCTTGTTCTCTGGCATGGTCATGCATTTTCTATCACAGGTTAC
GCGCCGGAACTGCAGAAGTGATACGTGGTCTGAGAGACACGTGCACCAAT
CACGACCTCCCCGACTACCGCAACCCTTTCCATCACGCACTTTGACTCTC
GCCGATCACTCTGGTGACTCCTTATTTTACGAGGCAACGAGGCAGCGAGG
CCACGATTCTGCTTCGTCATGCGCCGCCATGACATGTCATCTGCTGGAGA
TGTATGTAGTGCTCCGGCACGGCAACGACGTTGGTCGGAAGTACGCGATA
GGGATGCACCGGCATCCGCTATCAAATGTGCCGGTATCGCCATAAAGTAT
GGATGGATGCACCGTCATCCGGCTTTGCCACATATTCAAGGGTTTGGCCT
GCTTGCACCGGCTTGCGATTGACCCACTTGGTGCATTGGCACGTATTTTT
ACTCTTGTTGATCACTCCGGCGACTTTCTCTGTTTGACAAGGCAGCGAGG
CCACGAACCCGCGTCATCATGCGCGGGAATGACGCCTCGTCTGTTAGATA
TGTATGCAGTACATTTCCACCCCGGCGCGGCAACGGTGTTTTGCTGCACC
GGCGTCCGCTTTCACATGTGCCGGGATCACTTTTGAGTAAACATGGATGC
ACGCCGCGAAAGTCCACAAGCTTTGCACTGACAACATGAATCTCTTCTCG
CATGAGGTCCGACACAGACCGATTGACCAACTTGGTGCATTGACACCGAT
GTTTGGCTGGGGCGAGACGTGTATGCGCTGGCAATCGACTCGGATCTACC
ACATTCGCCGCTGCACCGACTCGCACGGGTACGATTTTGTTGCGTCGGCA
CCATTAAGGCCACCCACCGGGGCTCTAACTTTTCGTCCCCGACCCGCATA
CTTCCTCCGCGTTGTTTTTTTTAACTCGATTTGAGGAAGGGCACGAAGTC
GCCGCTGTCGAGATTGCCGGCTATTTTGGCAATTTGGGGCACGAGGCGCC
TGGCCTCGATCCCAAGACTTATGTAAGACTCATTGCCACATGAGGAACTT
AGCCGGTGGGCAAGCTTCAGACGGATGCTCGTGCGCCGAGAAGCAGCTTG
CCGAAATAGCGATTTTGGGGCTATCAGAGACACAAGAAAAAGAGCGGACC
AGTGTGGACTTCAGGTTCTAGCTGAGCATGCCGGGGCTGCTCATACGCAA
CGGAAAGCTACGAAAAGACACAGTTGTACTCGAATAGTGTCGAAGAGCAG
CTGCCGGCGATTTCAGCAGCAATGTTAGCCCCGTGTTGATATGGCAGCGA
CTTTTGGCATTTTGAAGTTCCCGCAGCAGTATGTTTTTACGCTCTAACCT
AGTTTGGGTGGATTGAGCTAAAGCAACCGCCCTGCGACTGCATCAGAGGA
ACGAAAGATACATGAGATAGCTGACGTCCTGGGCTTTCATAAAACCTATT
CGGATCGAGGCAGAGGGTATTGCGCCCCATTTTAATTTCCGATGCCGCGA
AGGCATGTCTTCGTGCACGGGAAGAAAACGTCGAAATCGGGGGTTGCACC
GCGTGTAACGGCTGCTTTTTTCGACCACATGCGATTTTTGGGCAACCGGG
ACAAAAAAAACGCGGACGCCTCCTTCATTCCCGCTACTTTTCCCCGCCGC
CTAAGCTTGGGATGCCTTAAGCATTTCTGCATCTCTTTAGGGCCAGTTTC
TATGTCGAGCAGAAAAAACAACACGAAGCGCCAATCCGTACGTACGCACG
ATTTGTTTACGGCCGCTGGGCTCTTGTGCCGCGCGTCTTCTCCACTCTCG
TCCTCGCGGTTGTCGCTTCGCGCGCACCTTAAAAAAAGTCCAAAGAGCGG
ATTTCCCGTGCGGGCAGAGCTCGTCGCGTGATCGGCAAGAAGTCGAGACG
GCGCGAACTCGCAAGCCTCTCTTCAAGACGTTTTCAGACGCCCCGAACAG
CAGTCGGGCGGGTGAGGCTTCCCGTACGAGATTTGGGGCCACGAATCCCG
CTCTCCGCGCGTGCGGCAGCTACGACGACACACCCGCGGCAGTGGGTTCA
CGACTACGCTTGATCACTGTCTGGGAAGTTTCGCTGCAGTCAGGCTAGTG
GGTCGAGTACTGCAGGCCCAGCCTGCCCAGCGCTGCGCCTCTCTCTAGAC
TGCTGTATGGGTTGCTGCTGTACATAAAAGCTGGCAGGCATCCTCAAATG
TCAAAGGACAAAAGGCAGAAAACGGTATACCGTGTCAAAATACGACATTA
ATCGGTAAAGGTGAAATTGGTCATCGGGACGTTATTGAATGCCCGTCCCT
GGTTGGCTAAGCTCCTCCTGTACCATGTTCTGGCGGATGTTTTGGAGGTA
TACCGGTCCCCGGATTTTCGGATCGAGTTCCACCGTTGTCTGTCGCCGGT
TATACCGGTTTCTGACGCAGAAAAATATGACTGCGCACGAACTTCCCGAC
TGATGCAGCTGGCCTGCAAATCCTCTCAACACCCCGACACCTCTCCGAAG
CAAATCAACCATCGATAGACCCGTTCGGCGTCTGGCGTACCCACGTCTGC
GGGAAGTTAATCATCATGCGGCAGCTTGCTGTACAAGCAACGTACATCCT
GTAGCACAGCATCTCGCCGCAAGGAGTTAGCTGCCTACTAGGCACTGAGT
AGATGGGCACGCTTTCGCCACGCTCAAGTCCCAAAACTCTCACATGTCCT
CCAAGTAACAGCCCCGCCGGGTGGGTCGCGGCCCACACCACACGTCCACC
CTCACGAACACACGCGATCCAACGCCCAACACGAGAGTACCCTGTCCCTC
ACGAAATCAACATGGCGTGCCAAACCACCTCGCTACGAGAGAGACTACTG
TACCGGTACGTTCTGCGTTGCTTTAGGGTGCCGCCGCTGGAAGAATACTT
CGTCTCGAAACAAAACCATCGTCCATGATGCGATAGCACATGATGCGATG
GTAATTGTACCCTCTGAGCTACAGCAGTGCTCACGAAAACTTGTTTTTGA
CGACCCGACGGGACGGTGACTTGAAGGACATGGGATTTTTGGGTTTCGGG
CGCAGCGAAAGCGTGCCCCGTGCCCAACAGGAAGCTGACTCTTTGCGACG
AGGTGCTGTGCGACAGGATGTACGTTGCTCATACAGCAATCTGCCGCATG
AGTAACTTCCCGCAGACAAGGGTACGCCAGACGCCGAACGGGTCTGACTC
TTATCGATGGTTGATTTGCTTCGGAGAGGTGTCGGGGCGTTGAGAGGAGT
TACAGGCCAGTCGCATTAGTCGGAAAGTTCGTGCGCAGTCGTTGTTTTTC
TGCGTCAGAAACCGGTATACCCGGCGATAGAAAGCAGTGAAACTCGACCC
GAGAAGCCGGGAACTGTTGCACCTCCCAAACATCCTCTAGAACGCGGTAC
AGGAGGAAACTGGCGAACCAGCGACGAGAATTAAACGACCTCCCGATGAC
CAATTTCGCCTGTACCGATATGTGTCGTATTTCGATACGGTTTACAGTTT
CCTATCGTATGTCCAATTTTAAACCTGAACCATCACTGCGTAGATTTTGC
TCAAGTTAAGTCTATCTGAAGCACCACTTATTCAAACGATGCCTGTACAC
GTTCTGCGTGTCTTCCTGACATCGCTATTCGTGTTCGGTCGAAATCGCGC
TTCGATTCCTCACACGGGTTACGTTGGATTAGAGCGCGGTCTGTCTTTCA
TAGTTCACAGTCTCGCCTTGTTTCGCCGTTGGTGATAAAAGGTCTGCCCC
GACCTGCGGAGATCTACACATGTGAGGTGCGATTTCTACCCACAGAGGCA
AGCAACGTCCGCAATTCGTGTACTCAAGCACAGAAGGCGTGCTGTACTGT
CGGGAAATGCCTCCTGTAGGAGTGGGAAGTGATGCGGGCGTCTTGGTTGG
AAGTGCGAAAAGTGCGAGTTGCACCAGACACACATGATACTCGTCGAGAC
CCCTTCAGTGCAAATGACTTCTGCGTGCCCCCCAGCAAAATCCGGATTCC
TTCTTTTGCTCTGCGAGGACACAAGGAAGCTCACATTTTTCCGCCACGAA
TTTAACACCGAAACAGCATCTCAGCAGCACTCGGTACGGCACCTCGACCT
CTCCAGAGATCAGACACGAAAGATCAGGCAGGCCTACAGGTACAGTACAT
CATAGGAGGGTAGCAGCGTGAGGGGTTCCGGACAAAAGTTTATCCCCTCT
CAGCAGCGGGTGTAGCGCGCGCTGAATTTCCAGCGCAACGAAAAATCCAG
CCACAGCAGTACCCTCCCCGCACATATTGCACTCCCACTCGAGGTGCCAG
CACCACGCCGCGCTCCTGTTGAAGGCATATTCAACAACCCACTCTCTGTG
CTTGCTTGAAGGATGTGTGGGTATTGCTTGCCTCTGTGGGCAGACATCGC
TGCCCACCCATGCTGCTGGGGGTGGTGTGCGAAGCACGGTGGCAGCGCAG
CAGTAGAGGCGGCCAGCAAAAGCTCATTTTTCGGAATTGGTCGATAGAAA
TGTTACTTACACCCATAACAACGATATCCACACACGAGCACGATACAAGC
CTTCTTCACGTACGGTATGTCTTCTGGAGGGAGCGAGTAGAGGGAGAATG
GAGTCATACTTTCCAACTAGCAGAGCACGTCATACGTCAGTTTGCTGCTG
TGACCGATGAGGTAACGAGAAAAGGAACGTTCTAGGGACCTTCCATGCCG
CAGAGTGTGGCTCCGTGCTGAATGCCGTGGCGTCTTCAGCACTTGATCAT
TAGAGTAAGCTGTGGAGAGCCTACTAGAAATGGTCGGATACAGGGCTGCG
CAGCAGGACAGATGTCACCATAGTGACGTTCCGGATCGACCACTCGGTGG
TTTCGACGCCAGGTTGGGGATGTTAATTCTCCATGTTATTTTGTGTCTTC
TTTTTCCGCTTCCTTTTCCATTACAAGTACACACATCTGCGCCTTCTCCG
CGATGTACATTGTTTCTCAACGCCGTGCCTCGTGCAAACATTGCTCCAAA
CAGCCACTCTTTAACGCGTACGCTTGTACCTTCCGATTCATTCAATTGAA
TTCAAGAAATAAAGCGCAAAAGTGCCTACCCAGGGCAATCGATGCAGTGA
ATAATCCCAGGACCAGCTGCAAGCGGGACAGGGGGGTGACTGTCAATTCC
CATGCCCTAGGTCAAGTTAGCGTTGCTTGCATCTTGGGCCAAACTTTGAA
AGCGAGGGGGCTGACTCTGGTGCTTGTAAATCGCATTCCTGCAGGTGTCG
GAGGAAGACGTCCGGACAGCGAGAGAAGCGCGACTAAAACGCTTCCACGA
GACGAAAACCTCGTACGCGGACATGATGAAGGAGGCAGCTGGGGGATGGA
CTCCTGACGATGCTGATGGCGAGACGGAGATCGCGACAGCGGAGGGATCT
CCGGAAGGCTTGCGGCGTAGATGGGGGAACCTAGCAGACTGA back to topCoding sequence (CDS) from alignment at H-canaliculatus_F_contig1516:651..18092- >mRNA_H-canaliculatus_F_contig1516.3859.1 ID=mRNA_H-canaliculatus_F_contig1516.3859.1|Name=mRNA_H-canaliculatus_F_contig1516.3859.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1056bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1516:651..18092- (Hapterophycus canaliculatus Oshoro5f female)
ATGCCTGGTCCAAACATCAAGTGGACGGCTGGTCCTGGCCCTGCACCACT
GCCATATTCAAAGCGGGCGAGAGAAGCTATGGGTGTCAACGACGATATGC
CTGGTCCAAACATCAAGTGGACGGCTGGTCCTGGCCCTGCACCACTGCCA
TATTCAAAGCGGGCGAGAGAAGCTATGGGTGTCAACGACGATGATAAGCC
TTGGGCGCACCCAGACCCACCCACGTTAGAGACCTGGGGACTTGGTGGCG
CCGGCGACGGCGGTGGCGGCGAGAGCAACCGTGATGCGCTTACAGAAGGG
AGGCTTCAGACCAACTTCCTTATGATCGTGCTGTTCATTATTGCCGCCAT
CTGGATGTATCGAAAATTCGTCAAGAGAGATCGGACACCCTTTTTCTACG
TGCCTCCAACAGCGTCGGATGATGTAAAGGTAAGGGATAAGCCTTGGGCG
CACCCAGACCCACCCACGTTAGAGACCTGGGGACTTGGTGGCGCCGGCGA
CGGCGGTGGCGGCGAGAGCAACCGTGATGCGCTTACAGAAGGGAGGCTTC
AGACCAACTTCCTTATGATCGTGCTGTTCATTATTGCCGCCATCTGGATG
TATCGAAAATTCGTCAAGAGAGATCGGACACCCTTTTTCTACGTGCCTCC
AACAGCGTCGGATGATGTAAAGGTAAGGGAAGACGTCCGGACAGCGAGAG
AAGCGCGACTAAAACGCTTCCACGAGACGAAAACCTCGTACGCGGACATG
ATGAAGGAGGCAGCTGGGGGATGGACTCCTGACGATGCTGATGGCGAGAC
GGAGATCGCGACAGCGGAGGGATCTCCGGAAGGCTTGCGGCGTAGATGGG
GGAACCTAGCAGACTGAGAAGACGTCCGGACAGCGAGAGAAGCGCGACTA
AAACGCTTCCACGAGACGAAAACCTCGTACGCGGACATGATGAAGGAGGC
AGCTGGGGGATGGACTCCTGACGATGCTGATGGCGAGACGGAGATCGCGA
CAGCGGAGGGATCTCCGGAAGGCTTGCGGCGTAGATGGGGGAACCTAGCA
GACTGA back to top
|