prot_H-canaliculatus_F_contig151.3830.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-canaliculatus_F_contig151.3830.1
Unique Name	prot_H-canaliculatus_F_contig151.3830.1
Type	polypeptide
Organism	Hapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length	95

Homology

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BLAST of mRNA_H-canaliculatus_F_contig151.3830.1 vs. uniprot
Match: D7FSA4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSA4_ECTSI)

HSP 1 Score: 162 bits (411), Expect = 3.320e-49
Identity = 82/94 (87.23%), Postives = 87/94 (92.55%), Query Frame = 0

Query:    1 MVPAVSLFLGNLVCMCLSLVQSATNKQKARMKAMLTVDAACEALLLLYNMVLLLGGTSGLMPKEEFVSRILTNVLFMSLCFTFAKARWVADGAF 94
            MVPAV LFLGNLVCMCLSLV+SATNKQKARMK MLTVDA CE LLL+YNM+LLLGG SGL+PKEEFV RILTNV+FMSLC TFAKARWVADGAF
Sbjct:   91 MVPAVGLFLGNLVCMCLSLVESATNKQKARMKTMLTVDAVCEGLLLVYNMLLLLGGASGLVPKEEFVGRILTNVVFMSLCVTFAKARWVADGAF 184

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BLAST of mRNA_H-canaliculatus_F_contig151.3830.1 vs. uniprot
Match: A0A6H5JEE0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEE0_9PHAE)

HSP 1 Score: 157 bits (398), Expect = 5.740e-45
Identity = 78/94 (82.98%), Postives = 87/94 (92.55%), Query Frame = 0

Query:    1 MVPAVSLFLGNLVCMCLSLVQSATNKQKARMKAMLTVDAACEALLLLYNMVLLLGGTSGLMPKEEFVSRILTNVLFMSLCFTFAKARWVADGAF 94
            +VPAV LFLGNLVCMCLSLV+SATN+QKARMK ML+VDA CE LLL+YNM+LLLGG SGL+PKEEFV RILTNV+F+SLC TFAKARWVADGAF
Sbjct:  290 LVPAVGLFLGNLVCMCLSLVESATNRQKARMKTMLSVDAVCEGLLLVYNMLLLLGGASGLVPKEEFVGRILTNVVFLSLCVTFAKARWVADGAF 383

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BLAST of mRNA_H-canaliculatus_F_contig151.3830.1 vs. uniprot
Match: A0A7S4DDY4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DDY4_HETAK)

HSP 1 Score: 71.2 bits (173), Expect = 1.200e-12
Identity = 40/91 (43.96%), Postives = 61/91 (67.03%), Query Frame = 0

Query:    2 VPAVSLFLGNLVCMCLSLVQSATNKQKARMKAMLTVDAACEALLLLYNMVLLLGGTSGLMPKEEFVSRILTNVLFMSLCFTFAKARWVADG 92
            VP V LFL N V  C+     A+  QK++MKA+L ++   E +LL+YN+V ++ G++   P+E +V R+L N  F++L F+FAKARW+ DG
Sbjct:  184 VPTVLLFLFN-VAGCIMCFFRAS--QKSKMKAILNMNGLSEMVLLVYNIVNMMKGSNMWTPREVYVGRVLVNFWFLTLWFSFAKARWITDG 271

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BLAST of mRNA_H-canaliculatus_F_contig151.3830.1 vs. uniprot
Match: A0A835ZG70_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG70_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 6.550e-12
Identity = 38/87 (43.68%), Postives = 56/87 (64.37%), Query Frame = 0

Query:    3 PAVSLFLGNLVCMCLSLVQSATNKQKARMKAMLTVDAACEALLLLYNMVLLLGGTSGLMPKEEFVSRILTNVLFMSLCFTFAKARWV 89
            P+++L + N  C+ L  +  AT K K RMK +LT+++  EA+LL  N  LL+ G + + PK E+VS +L NV F+S+C  FAK  WV
Sbjct:  221 PSLALLVANAACLALCCLSGATLKHKLRMKLVLTLNSLAEAVLLGVNTWLLVMGPARV-PKGEYVSSMLVNVWFLSICHNFAKMHWV 306

The following BLAST results are available for this feature:

BLAST of mRNA_H-canaliculatus_F_contig151.3830.1 vs. uniprot

BLAST of mRNA_H-canaliculatus_F_contig151.3830.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
D7FSA4_ECTSI	3.320e-49	87.23	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JEE0_9PHAE	5.740e-45	82.98	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A7S4DDY4_HETAK	1.200e-12	43.96	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A835ZG70_9STRA	6.550e-12	43.68	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 55..65
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 18..22
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..17
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..22
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 66..84
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 32..54
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 23..31
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 85..94
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3
None	No IPR available	SIGNALP_EUK	SignalP-TM	SignalP-TM	coord: 1..22 score: 0.666
None	No IPR available	TMHMM	TMhelix		coord: 66..83
None	No IPR available	TMHMM	TMhelix		coord: 44..61
None	No IPR available	TMHMM	TMhelix		coord: 4..23

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-canaliculatus_F_contig151	contig	H-canaliculatus_F_contig151:157..890 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90	2022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-canaliculatus_F_contig151.3830.1	mRNA_H-canaliculatus_F_contig151.3830.1	Hapterophycus canaliculatus Oshoro5f female	mRNA	H-canaliculatus_F_contig151 145..890 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-canaliculatus_F_contig151.3830.1 ID=prot_H-canaliculatus_F_contig151.3830.1|Name=mRNA_H-canaliculatus_F_contig151.3830.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=95bp
MVPAVSLFLGNLVCMCLSLVQSATNKQKARMKAMLTVDAACEALLLLYNM
VLLLGGTSGLMPKEEFVSRILTNVLFMSLCFTFAKARWVADGAF*