prot_H-canaliculatus_F_contig14825.3654.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig14825.3654.1
Unique Nameprot_H-canaliculatus_F_contig14825.3654.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length182
Homology
BLAST of mRNA_H-canaliculatus_F_contig14825.3654.1 vs. uniprot
Match: D7FM56_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM56_ECTSI)

HSP 1 Score: 224 bits (572), Expect = 5.360e-72
Identity = 134/168 (79.76%), Postives = 139/168 (82.74%), Query Frame = 0
Query:    1 MSTHCVSVLLLVCIAQECLAFVPSWTATFRSSRSQPSASAPTAATFSLLQPSGPICPVFGACGTCGAQYFYPVRGMTSSSAMSEGDEEEGGGDHDAREAADGSPAADEIRAVQDXXXXXXXXIEDAEEETAEVVKKIDCIEAAIAGGSKYLGMSDPEALLKQLGRKED 168
            MS +CVSVLLLV IAQ CLAFVPSWTATFRSSRSQP AS P AATFSL QPSGPICPVFGAC TCGAQ+FYPV GMTS SAMSEG EEEGGGDH AREAADGSPAADEIRAVQ XXXXXXXX               D IEAAIAGGS+YLGM+DPEALLKQLGRKE+
Sbjct:    1 MSRNCVSVLLLVGIAQACLAFVPSWTATFRSSRSQPPASTPAAATFSLSQPSGPICPVFGACDTCGAQFFYPVPGMTSLSAMSEGGEEEGGGDHHAREAADGSPAADEIRAVQXXXXXXXXXXXXXXXXXXXXXXXTDGIEAAIAGGSRYLGMTDPEALLKQLGRKEE 168          
BLAST of mRNA_H-canaliculatus_F_contig14825.3654.1 vs. uniprot
Match: D8LPP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPP1_ECTSI)

HSP 1 Score: 141 bits (356), Expect = 1.030e-39
Identity = 77/94 (81.91%), Postives = 80/94 (85.11%), Query Frame = 0
Query:   70 FYPVRGMTSSSAMSEGDEEEGGGDHDAREAADGSPAADEIRAVQDXXXXXXXXIEDAEEETAEVVKKIDCIEAAIAGGSKYLGMSDPEALLKQL 163
            FYPVRGMT  SAMSEGDEEEGGGDH AREAAD  PAADEIRAVQD        IEDAEEETAEVVKKID IEAAIAGG++YLGM+DPEALLKQL
Sbjct:    2 FYPVRGMTGLSAMSEGDEEEGGGDHHAREAADRLPAADEIRAVQDEIRGVERKIEDAEEETAEVVKKIDDIEAAIAGGARYLGMTDPEALLKQL 95          
BLAST of mRNA_H-canaliculatus_F_contig14825.3654.1 vs. uniprot
Match: D7G8Q1_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Q1_ECTSI)

HSP 1 Score: 137 bits (345), Expect = 2.430e-37
Identity = 76/93 (81.72%), Postives = 80/93 (86.02%), Query Frame = 0
Query:   76 MTSSSAMSEGDEEEGGGDHDAREAADGSPAADEIRAVQDXXXXXXXXIEDAEEETAEVVKKIDCIEAAIAGGSKYLGMSDPEALLKQLGRKED 168
            MTS SAMSEGDEEEGGGDHDAREAAD  PAADEIRAVQD         EDAE+ETAEVVKKID IEAAIAGGS+YLGM+DPEALLKQLGRKE+
Sbjct:    1 MTSLSAMSEGDEEEGGGDHDAREAADRIPAADEIRAVQDDIRGVERKXEDAEKETAEVVKKIDDIEAAIAGGSRYLGMTDPEALLKQLGRKEE 93          
BLAST of mRNA_H-canaliculatus_F_contig14825.3654.1 vs. uniprot
Match: D7G515_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G515_ECTSI)

HSP 1 Score: 133 bits (335), Expect = 1.180e-36
Identity = 86/100 (86.00%), Postives = 88/100 (88.00%), Query Frame = 0
Query:   76 MTSSSAMSEGDEEEGGGDHDAREAADGSPAADEIRAVQDXXXXXXXXIED-------AEEETAEVVKKIDCIEAAIAGGSKYLGMSDPEALLKQLGRKED 168
            MTSSSAMSEGDEEEGGGDHDAREAADGSPAADEIRAVQ XXXXXXXX          AEEETAEVVKKID IEAAIAGGSKYLGM+DPEALLKQLGRKE+
Sbjct:    1 MTSSSAMSEGDEEEGGGDHDAREAADGSPAADEIRAVQXXXXXXXXXXXXXXXXXXXAEEETAEVVKKIDYIEAAIAGGSKYLGMTDPEALLKQLGRKEE 100          
BLAST of mRNA_H-canaliculatus_F_contig14825.3654.1 vs. uniprot
Match: D7G3Q8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Q8_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 3.010e-23
Identity = 67/96 (69.79%), Postives = 74/96 (77.08%), Query Frame = 0
Query:   71 YPVRGMTSSSAMSEGDEEEGGGDHDAREAADGSPAADEIRAVQDXXXXXXXXIEDAEEETAEVVKKIDCIEAA-IAGGSKYLGMSDPEALLKQLGR 165
            YPVRG+TS SA+SEG+EE+GGGDHD REAA GSPAADEIRAVQ XXXXXXXX             KID +EAA IAGGS YLGM+DPEALLK+  R
Sbjct:    3 YPVRGITSLSALSEGNEEDGGGDHDTREAAGGSPAADEIRAVQXXXXXXXXXXXXXXXXXXXXXXKIDDVEAATIAGGSGYLGMTDPEALLKEKER 98          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14825.3654.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FM56_ECTSI5.360e-7279.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LPP1_ECTSI1.030e-3981.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G8Q1_ECTSI2.430e-3781.72Uncharacterized protein n=3 Tax=Ectocarpus silicul... [more]
D7G515_ECTSI1.180e-3686.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G3Q8_ECTSI3.010e-2369.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 109..143
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..181
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.903

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig14825contigH-canaliculatus_F_contig14825:336..912 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig14825.3654.1mRNA_H-canaliculatus_F_contig14825.3654.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig14825 252..1613 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig14825.3654.1 ID=prot_H-canaliculatus_F_contig14825.3654.1|Name=mRNA_H-canaliculatus_F_contig14825.3654.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=182bp
MSTHCVSVLLLVCIAQECLAFVPSWTATFRSSRSQPSASAPTAATFSLLQ
PSGPICPVFGACGTCGAQYFYPVRGMTSSSAMSEGDEEEGGGDHDAREAA
DGSPAADEIRAVQDEIRGVERKIEDAEEETAEVVKKIDCIEAAIAGGSKY
LGMSDPEALLKQLGRKEDNYAGRRSNSASSF*
back to top