mRNA_H-canaliculatus_F_contig1471.3596.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1471.3596.1
Unique NamemRNA_H-canaliculatus_F_contig1471.3596.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1471.3596.1 vs. uniprot
Match: D7FLJ6_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ6_ECTSI)

HSP 1 Score: 481 bits (1237), Expect = 3.300e-167
Identity = 252/376 (67.02%), Postives = 297/376 (78.99%), Query Frame = 1 
Query:   19 LALVAALLVAPASSVEYTIETCSDITDVDDTLVTAIIIDASIFTCDEYTRFRVRHAMTLKATGPSLKFSNFSLKVLGELTVEPDVVFTGVTDQIKNGGVLYVSEGASATFMGASSFTDNSVRNKPVGN--------------SYVTKKGGAIHNKGILMFEGEAIFERNEVRTDDSPDQGKGGAISNTGSGSILFKGKLVMEENMADGFFAGLGGAIYTRGNIVLDGESEFSLNAASDGGGIYQTSVGSLAFNGMTTFSENTAYELRGGGLYNGGGVVDFNDGSLFDGNRASGSGDGGFGGGIYNGDGGTVALTGPTTFSSNAAYWGGAIYTDDGDVEDGKAASATTYPDDADFVGNSAEFCPDVNNGDNDSCPEV 1104
            L L+A+LL APA++VEYT+ TC+D+ DVDDT VT++ IDAS F CDEYTRFRVR+AMTLKAT P+++F NFSLKVLGELTVEPDV+F GV DQ+KNGGVL V+EGA+ATFMG S F+DNSV  K +G               SY+ KKGGAIHNKG L FEG+A FERNEV T+DS +QGK GAISNTGSG+ILFK KL M++N ADGFF G+GGAIY RG IV++GES FSLN +SDGGGIYQTS+G++ FNG  TFSEN+AY+L GGGL N GGVV+ N GSLF+ N ASGSGDGG GG IYN + G V L G TTF  NAA+ GGAIYT DGD E+G+ AS TT+PDD  F  NSAE CPDV+NGD+D+CP V
Sbjct:    6 LTLIASLLAAPAAAVEYTVATCADLADVDDTQVTSLTIDASTFACDEYTRFRVRNAMTLKATVPAVEFGNFSLKVLGELTVEPDVMFNGVVDQVKNGGVLSVAEGATATFMGTSEFSDNSVAVKQIGPVSCGDGCTRIGRGLSYIVKKGGAIHNKGTLTFEGDATFERNEVHTEDSVEQGKAGAISNTGSGTILFKSKLTMKDNEADGFFEGIGGAIYNRGEIVVEGESLFSLNTSSDGGGIYQTSIGTMTFNGAATFSENSAYDLLGGGLMNDGGVVNINAGSLFELNGASGSGDGGLGGAIYNTNAGVVTLMGSTTFRENAAFMGGAIYTSDGDEENGEPASVTTFPDDTVFEDNSAEHCPDVHNGDSDNCPVV 381
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BLAST of mRNA_H-canaliculatus_F_contig1471.3596.1 vs. uniprot
Match: D8LJ44_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ44_ECTSI)

HSP 1 Score: 470 bits (1210), Expect = 4.190e-163
Identity = 250/376 (66.49%), Postives = 289/376 (76.86%), Query Frame = 1 
Query:   19 LALVAALLVAPASSVEYTIETCSDITDVDDTLVTAIIIDASIFTCDEYTRFRVRHAMTLKATGPSLKFSNFSLKVLGELTVEPDVVFTGVTDQIKNGGVLYVSEGASATFMGASSFTDNSVRNKPVGN--------------SYVTKKGGAIHNKGILMFEGEAIFERNEVRTDDSPDQGKGGAISNTGSGSILFKGKLVMEENMADGFFAGLGGAIYTRGNIVLDGESEFSLNAASDGGGIYQTSVGSLAFNGMTTFSENTAYELRGGGLYNGGGVVDFNDGSLFDGNRASGSGDGGFGGGIYNGDGGTVALTGPTTFSSNAAYWGGAIYTDDGDVEDGKAASATTYPDDADFVGNSAEFCPDVNNGDNDSCPEV 1104
            L L+A LL APA++VEYT+ TC+D+ DVDDT VT + ID S F CDEYTRF VR++MTLKAT  +++F NFSLKVLGELTVEPDV F GV DQ+KNGGVL V+EGA++TFMG S F+DNSV  K +G               SYV KKGGAIHNKG L FEG+A FERN V T+DS +QGK GAISNTGSG+I FK KL M++N A+GFF GLGGAIY RG I++DGES FSLN ASDGGGIYQT +G + FN M TFSEN+AYELRGGGL N GGVV+ N GSLF+ N ASGSGDGG GG IYNG+ G V L G TTF  NAAY GGAIYTDDG V +G+AAS TT+PDD  F  N A+FCPDV +GDND+CP V
Sbjct:    6 LTLIAGLLAAPAAAVEYTVATCADLADVDDTQVTGLTIDTSTFACDEYTRFPVRNSMTLKATVAAVEFGNFSLKVLGELTVEPDVTFNGVVDQVKNGGVLSVAEGATSTFMGTSEFSDNSVAVKQLGAVSCGDGCERTGRGLSYVVKKGGAIHNKGTLTFEGDATFERNAVHTEDSVEQGKAGAISNTGSGTIWFKSKLTMKDNEAEGFFEGLGGAIYNRGEIIVDGESLFSLNTASDGGGIYQTPIGKMTFNSMATFSENSAYELRGGGLMNYGGVVNINAGSLFELNGASGSGDGGLGGAIYNGNEGAVTLMGSTTFRENAAYEGGAIYTDDGSVANGEAASVTTFPDDTVFEDNRADFCPDVFDGDNDNCPVV 381
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BLAST of mRNA_H-canaliculatus_F_contig1471.3596.1 vs. uniprot
Match: D7FL58_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL58_ECTSI)

HSP 1 Score: 254 bits (648), Expect = 1.040e-79
Identity = 144/266 (54.14%), Postives = 173/266 (65.04%), Query Frame = 1 
Query:  349 MGASSFTDNSVRNKPVGN--------------SYVTKKGGAIHNKGILMFEGEAIFERNEVRTDDSPDQGKGGAISNTGSGSILFKGKLVMEENMADGFFAGLGGAIYTRGNIVLDGESEFSLNAASDGGGIYQTSVGSLAFNGMTTFSENTAYELRGGGLYNGGGVVDFNDGSLFDGNRASGSGDGGFGGGIYNGDGGTVALTGPTTFSSNAAYWGGAIYTDDGDVEDGKAASATTYPDDADFVGNSAEFCPDVNNGDNDSCPEV 1104
            MG S F++NSV  K  G               +Y+ KKGGAIHNKG L F+G+A FERN   T+ S  +G GGAISNTGSG+ILFK KL M++N AD  FAGLGGAIY RG I+++G S FSLN A+ GGGI+QTS+G++ FNGM TFSEN A E  GGGL N GGVV+ N GSLF+ N AS SGDGGFGG I+N                   +WGGAIYT+D D       S TT+PDD       AE+CPDV+NGD+D+CP V
Sbjct:    1 MGTSEFSNNSVAVKQFGRISCGDGCTRSERGLTYIVKKGGAIHNKGTLTFDGDATFERNVAHTESSNQRGNGGAISNTGSGTILFKSKLTMKDNQADANFAGLGGAIYNRGEIIVEGASLFSLNHAAAGGGIHQTSIGTMTFNGMATFSENFAGEPTGGGLTNNGGVVNINAGSLFEHNWASASGDGGFGGAIFNTKXXXXXXXXXXXXXXXXXHWGGAIYTNDADGP----GSVTTFPDDXXXXXXRAEYCPDVHNGDDDNCPVV 262
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BLAST of mRNA_H-canaliculatus_F_contig1471.3596.1 vs. uniprot
Match: A0A6H5KTD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTD4_9PHAE)

HSP 1 Score: 220 bits (561), Expect = 3.880e-65
Identity = 148/349 (42.41%), Postives = 192/349 (55.01%), Query Frame = 1 
Query:   82 CSDITDVDDTLVTAIIIDASIFTCDEYTRFRVRHAMTLKATGPSLKFSNFSLKVLGELTVEPDVVFTGVTDQIKNGGVLYVSEGASATFMGASSFTDNSVRNKPVGNSY---VTKKGGAIHNKGILMFEGEAIFERNEVRTDDSPDQGKGGAISNTGSGSILFKGKLVMEENMADGFFAGL-GGAIYTRGNIVLDGESEFSLNAASDGGGIYQTSVGSLAFNGMTTFSENTAYELRGGGLYNGGGVVDFNDGSLFDGNRASGSGDGGFGGGIYNGDGGTVALTGPTTFSSNAAYWGGAIYTDDGD-----VEDGKAASAT-TYPDDADFVGNSAEFCPD-VNNGDNDSC 1095
            C++   +D  + T + I  + F CDEYTR  +R  M LK++   + FSNF+LKV G LTVEPDVVFTGV+   KNGGVL +  GA   F G + F+DNS+ +  +  S    + +KGGAIH KG L FE +A F  N +        G GGAIS    GSI F GKL M +N AD +F G  GGAI+ RG+IV+DGE+EF+ N    GG I+Q    +L FN   TF+ N   +  GG + N GG V  N GSLF    A  SGDGG              LTG TTF  N   WGGA++           ED      T +YP+D  F  N A++C D  ++ D ++C
Sbjct:   29 CTEFAAIDRKVETEVTITEADFACDEYTRLSIRSNMVLKSSVGKVTFSNFALKVYGSLTVEPDVVFTGVSLVEKNGGVLKLELGAVGVFKGTAEFSDNSIISTSIDESTEEEILRKGGAIHTKGSLTFEKDATFSGN-LNDRLYYGSGPGGAISVHVKGSIYFMGKLTMTDNEADDYFGGAQGGAIFNRGDIVVDGEAEFTGNIGGRGGAIFQEKWATLVFNDFVTFTSNKCLDTFGGTIANIGGDVTANAGSLFFDGFAENSGDGGLXXXXXXXXXXXXXLTGSTTFRQNYGNWGGAVFNSAVPNAYFTAEDESYVMPTISYPEDTIFEDNDAQYCNDFASDFDEETC 376
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BLAST of mRNA_H-canaliculatus_F_contig1471.3596.1 vs. uniprot
Match: D7FQG1_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQG1_ECTSI)

HSP 1 Score: 192 bits (489), Expect = 4.640e-57
Identity = 106/177 (59.89%), Postives = 126/177 (71.19%), Query Frame = 1 
Query:  577 MEENMADGFFAGLGGAIYTRGNIVLDGESEFSLNAASDGGGIYQTSVGSLAFNGMTTFSENTAYELRGGGLYNGGGVVDFNDGSLFDGNRASGSGDGGFGGGIYNGDGGTVALTGPTTFSSNAAYWGGAIYTDDGDVEDGKAASATTYPDDADFVGNSAE-FCPDVNNGDNDSCPEV 1104
            M EN  DG + GLGGAIY RG I ++GES FS N +SDGGGIYQTS+G + FN M TF  N A  LRGGGL N GGVV+ N GSLF+ N A+ + DGG GG I+N +GG V L GPTTF  N A+WGGAIYTDDG       AS TT+PDD  F  NSA+ +CPDV+NGD+++CP V
Sbjct:    1 MNENDTDGQYGGLGGAIYNRGEITVEGESLFSENRSSDGGGIYQTSIGIMTFNSMATFFHNVAENLRGGGLMNDGGVVNINAGSLFEQNFAAANADGGRGGAIHNRNGGVVTLMGPTTFRENGAWWGGAIYTDDG-----YPASVTTFPDDTVFEDNSADAYCPDVHNGDDNNCPVV 172
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BLAST of mRNA_H-canaliculatus_F_contig1471.3596.1 vs. uniprot
Match: D7FQG2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQG2_ECTSI)

HSP 1 Score: 125 bits (315), Expect = 5.040e-32
Identity = 62/97 (63.92%), Postives = 76/97 (78.35%), Query Frame = 1 
Query:   19 LALVAALLVAPASSVEYTIETCSDITDVDDTLVTAIIIDASIFTCDEYTRFRVRHAMTLKATGPSLKFSNFSLKVLGELTVEPDVVFTGVTDQIKNG 309
            L  +A+LL  PA++VEY + TC+D+ DVDDT VT + IDA+ F CDEYTRFRVR++MTLKAT  +++F NFSLKVLGELTVEPDV F GV DQ   G
Sbjct:    6 LTFIASLLATPAAAVEYMVTTCADLADVDDTQVTGLTIDANTFACDEYTRFRVRNSMTLKATVSAVEFGNFSLKVLGELTVEPDVTFNGVVDQSSEG 102
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1471.3596.1 vs. uniprot
Match: A0A5B9R9B7_9BACT (Putative outer membrane protein PmpB n=1 Tax=Roseimaritima ulvae TaxID=980254 RepID=A0A5B9R9B7_9BACT)

HSP 1 Score: 58.9 bits (141), Expect = 1.160e-5
Identity = 74/267 (27.72%), Postives = 102/267 (38.20%), Query Frame = 1 
Query:  268 DVVFTGVTDQIKNGGVLYVSEGASATFMGASSFTDNSVRNKPVGNSYVTKKGGAIHNKGILMFEGEAIFERNEVRTDDSPDQGKGGAISNTGSGSILFKGKLVMEENMADGFFAGLGGAIYTRGNIVLDGESEF-------------------------------------SLNAASDGGGIYQTSVGSLAFNGMTTFSENTAYELRGGGLYNGGGVVDFNDGSLFDGNRASGSG---DGGFGGGIYNGDGGTVALTGPTTFSSNAA 948
            D + TG      NGG L+VS   +    G +           V  +    +GG + N                   D + D G GG I N+  G++     + +  N+ADG   G GG I   G + +D                                          ++ A  +GGG++ T        G T  S NTA  L GGGL+NG G +   DG++ DGN ASG G   DGG  GGI+N  GGTV+L       +N A
Sbjct:  607 DAIGTGAAPG--NGGGLHVSGDGNVDITGGT-----------VDGNTAALEGGGLWNXXXXXXXXXXXXXXXXXSGDAAADDG-GGGIFNSFGGTVNLLNDVAITNNIADGPTYGSGGGILNLGELTVDASDIVITGNQANRAXXXXXXXXXXXXXXXXXXXXXXNAGVAPAVGAPGNGGGLHITGGADSNITGGTV-SGNTA-ALEGGGLWNGTGTMTI-DGTIIDGNTASGDGAADDGG--GGIFNSAGGTVSLLNNVAIINNIA 854
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1471.3596.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FLJ6_ECTSI3.300e-16767.02Asn/thr-rich large protein family protein n=1 Tax=... [more]
D8LJ44_ECTSI4.190e-16366.49Asn/thr-rich large protein family protein n=1 Tax=... [more]
D7FL58_ECTSI1.040e-7954.14Asn/thr-rich large protein family protein n=1 Tax=... [more]
A0A6H5KTD4_9PHAE3.880e-6542.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQG1_ECTSI4.640e-5759.89Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
D7FQG2_ECTSI5.040e-3263.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A5B9R9B7_9BACT1.160e-527.72Putative outer membrane protein PmpB n=1 Tax=Rosei... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1471contigH-canaliculatus_F_contig1471:4277..10127 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score61.6
Seed ortholog evalue8.8e-07
Seed eggNOG ortholog1223410.KN050846_gene405
EggNOG free text desc.Parallel beta-helix repeats
EggNOG OGs1HZV9@117743,4NGEX@976,COG2931@1,COG2931@2,COG3210@1,COG3210@2
COG Functional cat.U
Best tax levelFlavobacteriia
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Exons8
Model size1107
Cds size1107
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1471.3596.1prot_H-canaliculatus_F_contig1471.3596.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1471 4277..10127 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929217.5129325-CDS-H-canaliculatus_F_contig1471:4276..43271622929217.5129325-CDS-H-canaliculatus_F_contig1471:4276..4327Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1471 4277..4327 -
1696845721.8933685-CDS-H-canaliculatus_F_contig1471:4276..43271696845721.8933685-CDS-H-canaliculatus_F_contig1471:4276..4327Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1471 4277..4327 -
1622929217.5624695-CDS-H-canaliculatus_F_contig1471:4562..47071622929217.5624695-CDS-H-canaliculatus_F_contig1471:4562..4707Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1471 4563..4707 -
1696845721.903568-CDS-H-canaliculatus_F_contig1471:4562..47071696845721.903568-CDS-H-canaliculatus_F_contig1471:4562..4707Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1471 4563..4707 -
1622929217.5788388-CDS-H-canaliculatus_F_contig1471:6097..62371622929217.5788388-CDS-H-canaliculatus_F_contig1471:6097..6237Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1471 6098..6237 -
1696845721.9122431-CDS-H-canaliculatus_F_contig1471:6097..62371696845721.9122431-CDS-H-canaliculatus_F_contig1471:6097..6237Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1471 6098..6237 -
1622929217.594913-CDS-H-canaliculatus_F_contig1471:6633..67171622929217.594913-CDS-H-canaliculatus_F_contig1471:6633..6717Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1471 6634..6717 -
1696845721.932447-CDS-H-canaliculatus_F_contig1471:6633..67171696845721.932447-CDS-H-canaliculatus_F_contig1471:6633..6717Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1471 6634..6717 -
1622929217.616864-CDS-H-canaliculatus_F_contig1471:7409..74991622929217.616864-CDS-H-canaliculatus_F_contig1471:7409..7499Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1471 7410..7499 -
1696845721.9424942-CDS-H-canaliculatus_F_contig1471:7409..74991696845721.9424942-CDS-H-canaliculatus_F_contig1471:7409..7499Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1471 7410..7499 -
1622929217.632621-CDS-H-canaliculatus_F_contig1471:7833..79891622929217.632621-CDS-H-canaliculatus_F_contig1471:7833..7989Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1471 7834..7989 -
1696845721.9517612-CDS-H-canaliculatus_F_contig1471:7833..79891696845721.9517612-CDS-H-canaliculatus_F_contig1471:7833..7989Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1471 7834..7989 -
1622929217.6483614-CDS-H-canaliculatus_F_contig1471:8906..90501622929217.6483614-CDS-H-canaliculatus_F_contig1471:8906..9050Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1471 8907..9050 -
1696845721.9608037-CDS-H-canaliculatus_F_contig1471:8906..90501696845721.9608037-CDS-H-canaliculatus_F_contig1471:8906..9050Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1471 8907..9050 -
1622929217.6706297-CDS-H-canaliculatus_F_contig1471:9830..101271622929217.6706297-CDS-H-canaliculatus_F_contig1471:9830..10127Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1471 9831..10127 -
1696845721.9692833-CDS-H-canaliculatus_F_contig1471:9830..101271696845721.9692833-CDS-H-canaliculatus_F_contig1471:9830..10127Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1471 9831..10127 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1471.3596.1

>prot_H-canaliculatus_F_contig1471.3596.1 ID=prot_H-canaliculatus_F_contig1471.3596.1|Name=mRNA_H-canaliculatus_F_contig1471.3596.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=369bp
MKHGSCLALVAALLVAPASSVEYTIETCSDITDVDDTLVTAIIIDASIFT
CDEYTRFRVRHAMTLKATGPSLKFSNFSLKVLGELTVEPDVVFTGVTDQI
KNGGVLYVSEGASATFMGASSFTDNSVRNKPVGNSYVTKKGGAIHNKGIL
MFEGEAIFERNEVRTDDSPDQGKGGAISNTGSGSILFKGKLVMEENMADG
FFAGLGGAIYTRGNIVLDGESEFSLNAASDGGGIYQTSVGSLAFNGMTTF
SENTAYELRGGGLYNGGGVVDFNDGSLFDGNRASGSGDGGFGGGIYNGDG
GTVALTGPTTFSSNAAYWGGAIYTDDGDVEDGKAASATTYPDDADFVGNS
AEFCPDVNNGDNDSCPEV*
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mRNA from alignment at H-canaliculatus_F_contig1471:4277..10127-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1471.3596.1 ID=mRNA_H-canaliculatus_F_contig1471.3596.1|Name=mRNA_H-canaliculatus_F_contig1471.3596.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=5851bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1471:4277..10127- (Hapterophycus canaliculatus Oshoro5f female)
ATGAAGCATGGGAGCTGCCTCGCGCTCGTCGCTGCTCTGCTAGTTGCACC
AGCCTCTTCGGTGGAATACACCATCGAAACATGTTCGGACATCACCGATG
TGGATGATACCTTGGTAACAGCCATCATCATCGACGCCAGCATTTTCACT
TGTGATGAGTACACGCGTTTCCGCGTTCGCCACGCCATGACACTCAAGGC
CACTGGTCCTTCGCTGAAGTTCTCCAACTTCTCGCTGAAGGTACTCGGGG
AGCTGACGGTTGAGCCCGACGTGGTTTTTACGGGCGTCACGGACCAGGTG
CGAAAATTTGGTGGCCTCCAAATGAGGACTATGATAGGTACGGCACATAC
AAGAATCTAATCCTACGGCCCTCTCAGCCCTCTTGTTATAGAATCGACCA
TCAATCCTTGGCTAAAGCCCTAGAACAGCAGGTTGGACTATCGATAGGGA
AGGGAAGAGACAGAATCCTCCATTTCAACCTGTTCATATGCGTATCCATA
TGGAATCTTTGTTTCTGCTCTCAGGTGGCCTTCTTTGATGACTACAATTC
ACTTGCCTAGCATATGCGGTCGCGTTGAGAAACCAAAGCGTCAACGGATG
CCTATGAGAGCGGTGTTCCCTTCCGTGATAGGAGGCCTCATCTTATCCTG
ATGTTCAAATTTAAGATTTTACAGTTGTGATCGAAGATCACACAGCGGTT
ATGCTGAGTCTTCCCGCTCTTTCGGAAAGTCTACCGCAATACTTGACGTT
CACTCTTACCACAAGATGGCCATTTCGGGACGATGGGGACACGGTATTCT
CTTTGAGTTTGAATCTGGAGAATTCCAAAATACGTGTTTTTGCTGGTCGT
TTCGAAACATGTATGTCAGGTGCGATATCGGGATCCTCGCGACTGTTGTG
TCACCACCTGGCTAGGGCTACAAGCACTCAAAACGATTTTTCGGAGGGAG
GTAATTTCGTACGCACCAGCAAACATTACGAACTTCGCTATGACTGTCTT
GGAGTAGGACAGTACGCGGGCCCCTTTGTGCCGACACCTTCTTGTTTTAT
TACAATCGACCCCCCCCTCCCCATCAGATCAAGAACGGCGGCGTCTTGTA
CGTGTCTGAGGGGGCAAGTGCTACTTTCATGGGCGCGTCCAGCTTCACGG
ACAATTCTGTCAGGAACAAACCAGTCGGCAACAGCTACGTCACCAAGAAG
GGGGGAGCCATACACAACAAGGTCTCGTTAAAGAACAGTAGAGAAGATAC
GACCGCGTGGGTGCGCCCATACGACCGCGTGGGTGCGCTGGGCGCGCGGT
TTGTTTGCTTTCGTAGTGAATTACACTAGGCACGATTTGACCGCACCCTC
AAGCTGACCAACGAGAGGGCGCTCGCAGCATCGATCACGCGAAATGGATG
ACAAATAGGTGGGAGCCCATGTCCGGCCGGAAACAAGCAAGATCATCTCA
ATCGCGGGGTCCACAAGGATGGGCGCGGGATAGATGGGTTGAAACGATGC
ATCCCACGGATGCAAATCATTCACGTATTACCGCGCTTCATCGTTGCGGT
TCCTCGGTTTCATCTGCCTGTTCCTCGCCATGCGCGGCGAGATCAGACTG
ATCGATGGAGGTGTTTTCGCATGAAGGCATGGCAATGACAGACGTTGACC
ATGTTGTTGTAGCTTCCACGACATGCGCAGACGTCGCAAATTCTTCCCTG
AGCACGCACTAGGAACGTCGGGCGTCTATATCCCGAACTCGCTCGGCATA
ACCTTACATCAGTGAGCAGGTACGTCATGACTTTCCTGGGATCAACGCAG
AATGTAACGTTCGAACGATCTCATTAGAGGAGCGCGTGTGCGACCTTCGG
ACACGATGTGAGTACAAGAGGCGCCGTGCGGTAGACAGCCACTAGTGAAG
AAGAGAAGGCATTTGCCGAGGGAAGTTGTGACACGTGACAAGGTACACGT
GAAGCAAAGTAACAAAGGATGAAAAACAGAAAGAGATCCGGGAAGCACGT
TGTGCTGTGAAAAGGGCCCCAAGCATGCGCGATGTTTGTGGTTTATTCGT
TTTTTCGTGCGCCAATCCTTTATTTCCGGAGTTGATCGGTTCGTCCTTCT
GTGTCCGCAATTCCTCATACGTTCGTACCTGGCATCAGGGCATACTGATG
TTCGAAGGAGAGGCCATCTTTGAGAGAAACGAAGTTCGCACGGACGACTC
GCCCGACCAGGGAAAGGGCGGCGCCATATCTAATACTGGATCCGGCAGCA
TCCTCTTCAAGGGCAAGCTCGTCATGGAGGAAAACATGGCTGATGTCCGT
ACTAGCCATCCCCTTCGTGTGTCTATTCACGGCATTGTATGTCCGGCAGT
GTGAAGAATGATGCGTGGTGCGCATGGCATAAACTTGCATGCATGGACCC
AGCCTTCCCTCGTGAGTAGCTCTGTCGTCTTCCACAAGGCCGGGGATTTC
ACATTTTTTGGGTGCCACATGTTTGACGATGAGTTTCATCGTGTCTGTGG
CCCATGCGAAAATAACACAATAAAGCAGTGTGGAACTCACGAATGGCCGC
GAACACAGCCATTTCTAACGGTGATGGATACCCATCTGTCCACCCACTGC
GAATGCGACATACGGTGACTCACGACAGGGCTTTTTCGCGGGGCTTGGTG
GCGCAATCTACACACGTGGCAACATCGTCCTAGACGGCGAGAGCGAGTTC
TCTCTCAACGCGGCGTCAGTGAGCAAATAATTTATTTCTGTGACGGCAGT
AGCTGCTACTGTCGCCGTTGTCGGTGCACTACTGCTGCTGCCGCTGTTGC
TGCGTTTCAGCTGCTGCTGTGTGAAACTAGTTGTGGATTAAGAAGTCGCC
TCGAAACCGTGCCGGCATGAGTAGTTAGCCTGTTCCGTCAGCATCGGTCC
GGGTTGCGACCCCAATCAGAAGATATAATTTCCCCTCTCCTAAGCCCAGC
AGTGTATCCCATGGGCATTCGCTGGATTTTATCGTGCATTGACTGGCTTG
GGGATCCTTTGAATCATGTCAGGGCTGGTATCCTTGCGGAGGCCACGCCA
ACATTGTAATTTTTCTTCACCTTTGTGCGCCGCAGTTTGAAGCATTCAAA
TGAACGACCCAGACTTCAAACACATTCAACAGTAGACGGCCATCCAACAC
GCACCCTAGAAGGCGTTTGCCGAGGGGCATCGAGATTCTCATTCCAAACA
AATCGTGCTACACTGTACTCACCTCCACGGCAAGGGCAACCACCCTGGGG
ACCTGATAGAAGACCGCGCTTGCAGAACTGCCGGGATGTGTTCTGCCAAT
AGAGCGATGTTTGACAATCGCGGTCTAGTTTCCCTCCAAGACAAACCGGT
ACGCAACGACGACGGCGGCCCTAAAAACTTGCTGCCTGATCCCCTTCTTG
GTTCGGGCAGGACGGCGGAGGAATTTACCAGACCTCTGTCGGCAGTCTGG
CATTCAACGGCATGACAACCTTCTCCGAGAACACTGCGTACGAGGTATTT
TATCTTCAAATTATTTCGCTGAAGTCCGTCGGATGCACACATTCGATTGA
CAAAGCCGGTTTTCCGTTCTCTTTGGCAAGTTCTCCCTCATACCTCCCTT
GCTTGGAGCATTGAAGGTCAAGAGTTCCGGTGCAAGCATACGCTCAACGC
CCCTCGGTTGTGCTAGCGAAGTTGCTGTGTATAGTTTTGCTTCGCTTCGC
GGCTTGTCGTATTCTTCCACAGTAGACGTAGAGAATCTGGAGTACGAAAC
GTGCTAGAGGCAACCATAGAGCGAAAGAACGTACAGCTGGTCAGGCTGAA
CCACGGTTCTTCTTTTTTCCTCCTCGCCGTTGTGCCCGTGATGCACCTCA
TGTCTCGACAAAACTCCACGACGGGTTCTGATCCTATTAGCTGCGTGGCG
GTGGACTGTACAATGGTGGCGGCGTAGTGGACTTCAACGATGGTAGCCTC
TTCGACGGGAACAGAGCAAGCGGCTCTGGGGACGGAGGCTTCGGGGGGGG
CATCTACAACGGCGATGGAGGAACGGTCGCGTGAGAACATGCCGCATTTG
CCTCTCACGCAAATGAGCTTGACCTGATGAAGACCTATCTCGACAGTTGG
TTATTCGAAAGATGCTCTAATTTATAGCTCTTCTTTATCCCCTGACCAAC
GAAGATAGACCAGCCGAGGAGAGCAGGGAATGCAAATTTGTGGCTTGCAA
GCATCGGGGCAGCTGTGATTGGACATGATCCCCAAGAACAAATCTCTGTT
CAAGTCTGTTGGTAAAAAAACGAAACACTTCATGCACGGCACGAAACAGA
AGCCACTCTAAACTCCAACAACGTCCCTTCGCGTCCACAGCATTCGTCTG
GGTTTTTCGACCACACCAGTTGTGCACGGCTCCAGCCATGTTTCGAATGG
ATGGCGAGAACAAGAGTGTTTGCGACCTAGAAAGGATCAGGGTTTCTGCT
CCCGGCGGCGCTGTGATGTTACAGTCTTGAGCCAGTTTTCACGAACGCAC
GCGTTTTCCAGCGATTCACGACCTTGAATATACCCCGTTGGGGAAGGAAT
GCTTCGGTTTAAACTAACTCGTATCCTCGAGCAAGCGTGGGGGGGAGGTT
GCCAAGTGGAACTTGAGCGGGAAAGTGGATTACCTAGGCGGAAGGCTCGC
AAAGACCAAACTGTCCATACAGGTTGTGCGATTTTCACCCGACGCATCAG
CGCACATGTCTCCCGCACCTCCGATACTCGAGGGTTATCACTGCCGTTGA
TCTAGCGGGCACACTGCCAGGCGCGTAGAAAGAAGCCTTTTGGGCAGGTG
CCGGACGACACGTGATTCTTGCCATCCTCTACAAAAGAGCCTCTTTCACT
ATTCTGAGCTGGAAAAACACGATCCCTGTGGGAACCTATCCCACTGTATA
CTGCCCATGAAGATGAAAGATTGATTGATGCCTGATGCCATACGAGACGC
TTTTCTTTTTCGCTTGCTAGTGTGTCAAGCACGGATTGCCCCAAACGGAG
ATTTGCAGGCGAAGCTCGTGTCGCGGGTTCCCTCCTGTTGTCAATGAGAA
CCAGCTCAGATCACGTTACAAAGTTAGGGCTAATTAGCCTACCGAAATGT
CTGCGCTCAAGAAGAGCAAACGGCTTCTCCCCATGTTTGTGTGTCCGTTT
CCAAGAAGGGTTGCTGGATCACTTTTCCGTATTCCAGCCCTGAACACTTC
CTATGACGGATCGCGAGATTCCCCCCGAGCCTTGTATTCAGGGCGTTTCA
TATATTTTTCAAACATGAATGCCACCCCAACAGCAATACGGTGTAGGCGA
GGTTCCGGGGATTGCATCATGCAGTAGGGTTACTAAGCCCGTCTTTCGGC
TTCCCACTTGGGCTTCTGTTTGTTTGCTCGCGGCCGTTCATGCTCCACCC
TGTCGCATCTTCAACCTCAGGCTGACAGGCCCGACCACTTTCAGCTCGAA
CGCGGCCTACTGGGGTGGGGCTATTTACACCGACGATGGCGATGTAGAAG
ATGGTAAAGCTGCCTCGGCCACGACGTACCCGGATGACGCTGATTTTGTC
GGCAACAGCGCCGAGGTAAGGCGTGGTCTACGCTTGTAGTGTGCCATCGT
TCATGCTCCACATCATGCAATGTTCGGTGTACTCCACATGGTGAACGACC
TTTCCACCTTACCGTATCGTCGACAACGCCCTTCACTCTTCGAGATTCCC
TTCGTTTGTTGCGCGTCCAGCCATCTCGTATTGCATGCGTCCTTTCGCTG
TAACGATCTGTGGCTTATCTCGACTCAAACCGTCGCTTTGCACCAACCAG
TTCTGCCCCGACGTGAACAACGGCGACAATGACAGCTGCCCTGAAGTGTG
A
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1471:4277..10127-

>mRNA_H-canaliculatus_F_contig1471.3596.1 ID=mRNA_H-canaliculatus_F_contig1471.3596.1|Name=mRNA_H-canaliculatus_F_contig1471.3596.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2214bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1471:4277..10127- (Hapterophycus canaliculatus Oshoro5f female)
ATGAAGCATGGGAGCTGCCTCGCGCTCGTCGCTGCTCTGCTAGTTGCACC
AGCCTCTTCGGTGGAATACACCATCGAAACATGTTCGGACATCACCGATG
TGGATGATACCTTGGTAACAGCCATCATCATCGACGCCAGCATTTTCACT
TGTGATGAGTACACGCGTTTCCGCGTTCGCCACGCCATGACACTCAAGGC
CACTGGTCCTTCGCTGAAGTTCTCCAACTTCTCGCTGAAGGTACTCGGGG
AGCTGACGGTTGAGCCCGACGTGGTTTTTACGGGCGTCACGGACCAGATG
AAGCATGGGAGCTGCCTCGCGCTCGTCGCTGCTCTGCTAGTTGCACCAGC
CTCTTCGGTGGAATACACCATCGAAACATGTTCGGACATCACCGATGTGG
ATGATACCTTGGTAACAGCCATCATCATCGACGCCAGCATTTTCACTTGT
GATGAGTACACGCGTTTCCGCGTTCGCCACGCCATGACACTCAAGGCCAC
TGGTCCTTCGCTGAAGTTCTCCAACTTCTCGCTGAAGGTACTCGGGGAGC
TGACGGTTGAGCCCGACGTGGTTTTTACGGGCGTCACGGACCAGATCAAG
AACGGCGGCGTCTTGTACGTGTCTGAGGGGGCAAGTGCTACTTTCATGGG
CGCGTCCAGCTTCACGGACAATTCTGTCAGGAACAAACCAGTCGGCAACA
GCTACGTCACCAAGAAGGGGGGAGCCATACACAACAAGATCAAGAACGGC
GGCGTCTTGTACGTGTCTGAGGGGGCAAGTGCTACTTTCATGGGCGCGTC
CAGCTTCACGGACAATTCTGTCAGGAACAAACCAGTCGGCAACAGCTACG
TCACCAAGAAGGGGGGAGCCATACACAACAAGGGCATACTGATGTTCGAA
GGAGAGGCCATCTTTGAGAGAAACGAAGTTCGCACGGACGACTCGCCCGA
CCAGGGAAAGGGCGGCGCCATATCTAATACTGGATCCGGCAGCATCCTCT
TCAAGGGCAAGCTCGTCATGGAGGAAAACATGGCTGATGGCATACTGATG
TTCGAAGGAGAGGCCATCTTTGAGAGAAACGAAGTTCGCACGGACGACTC
GCCCGACCAGGGAAAGGGCGGCGCCATATCTAATACTGGATCCGGCAGCA
TCCTCTTCAAGGGCAAGCTCGTCATGGAGGAAAACATGGCTGATGGCTTT
TTCGCGGGGCTTGGTGGCGCAATCTACACACGTGGCAACATCGTCCTAGA
CGGCGAGAGCGAGTTCTCTCTCAACGCGGCGTCAGGCTTTTTCGCGGGGC
TTGGTGGCGCAATCTACACACGTGGCAACATCGTCCTAGACGGCGAGAGC
GAGTTCTCTCTCAACGCGGCGTCAGACGGCGGAGGAATTTACCAGACCTC
TGTCGGCAGTCTGGCATTCAACGGCATGACAACCTTCTCCGAGAACACTG
CGTACGAGGACGGCGGAGGAATTTACCAGACCTCTGTCGGCAGTCTGGCA
TTCAACGGCATGACAACCTTCTCCGAGAACACTGCGTACGAGCTGCGTGG
CGGTGGACTGTACAATGGTGGCGGCGTAGTGGACTTCAACGATGGTAGCC
TCTTCGACGGGAACAGAGCAAGCGGCTCTGGGGACGGAGGCTTCGGGGGG
GGCATCTACAACGGCGATGGAGGAACGGTCGCCTGCGTGGCGGTGGACTG
TACAATGGTGGCGGCGTAGTGGACTTCAACGATGGTAGCCTCTTCGACGG
GAACAGAGCAAGCGGCTCTGGGGACGGAGGCTTCGGGGGGGGCATCTACA
ACGGCGATGGAGGAACGGTCGCGCTGACAGGCCCGACCACTTTCAGCTCG
AACGCGGCCTACTGGGGTGGGGCTATTTACACCGACGATGGCGATGTAGA
AGATGGTAAAGCTGCCTCGGCCACGACGTACCCGGATGACGCTGATTTTG
TCGGCAACAGCGCCGAGGCTGACAGGCCCGACCACTTTCAGCTCGAACGC
GGCCTACTGGGGTGGGGCTATTTACACCGACGATGGCGATGTAGAAGATG
GTAAAGCTGCCTCGGCCACGACGTACCCGGATGACGCTGATTTTGTCGGC
AACAGCGCCGAGTTCTGCCCCGACGTGAACAACGGCGACAATGACAGCTG
CCCTGAAGTGTGATTCTGCCCCGACGTGAACAACGGCGACAATGACAGCT
GCCCTGAAGTGTGA
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