prot_H-canaliculatus_F_contig1471.3596.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1471.3596.1
Unique Nameprot_H-canaliculatus_F_contig1471.3596.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length369
Homology
BLAST of mRNA_H-canaliculatus_F_contig1471.3596.1 vs. uniprot
Match: D7FLJ6_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ6_ECTSI)

HSP 1 Score: 481 bits (1237), Expect = 3.300e-167
Identity = 252/376 (67.02%), Postives = 297/376 (78.99%), Query Frame = 0
Query:    7 LALVAALLVAPASSVEYTIETCSDITDVDDTLVTAIIIDASIFTCDEYTRFRVRHAMTLKATGPSLKFSNFSLKVLGELTVEPDVVFTGVTDQIKNGGVLYVSEGASATFMGASSFTDNSVRNKPVGN--------------SYVTKKGGAIHNKGILMFEGEAIFERNEVRTDDSPDQGKGGAISNTGSGSILFKGKLVMEENMADGFFAGLGGAIYTRGNIVLDGESEFSLNAASDGGGIYQTSVGSLAFNGMTTFSENTAYELRGGGLYNGGGVVDFNDGSLFDGNRASGSGDGGFGGGIYNGDGGTVALTGPTTFSSNAAYWGGAIYTDDGDVEDGKAASATTYPDDADFVGNSAEFCPDVNNGDNDSCPEV 368
            L L+A+LL APA++VEYT+ TC+D+ DVDDT VT++ IDAS F CDEYTRFRVR+AMTLKAT P+++F NFSLKVLGELTVEPDV+F GV DQ+KNGGVL V+EGA+ATFMG S F+DNSV  K +G               SY+ KKGGAIHNKG L FEG+A FERNEV T+DS +QGK GAISNTGSG+ILFK KL M++N ADGFF G+GGAIY RG IV++GES FSLN +SDGGGIYQTS+G++ FNG  TFSEN+AY+L GGGL N GGVV+ N GSLF+ N ASGSGDGG GG IYN + G V L G TTF  NAA+ GGAIYT DGD E+G+ AS TT+PDD  F  NSAE CPDV+NGD+D+CP V
Sbjct:    6 LTLIASLLAAPAAAVEYTVATCADLADVDDTQVTSLTIDASTFACDEYTRFRVRNAMTLKATVPAVEFGNFSLKVLGELTVEPDVMFNGVVDQVKNGGVLSVAEGATATFMGTSEFSDNSVAVKQIGPVSCGDGCTRIGRGLSYIVKKGGAIHNKGTLTFEGDATFERNEVHTEDSVEQGKAGAISNTGSGTILFKSKLTMKDNEADGFFEGIGGAIYNRGEIVVEGESLFSLNTSSDGGGIYQTSIGTMTFNGAATFSENSAYDLLGGGLMNDGGVVNINAGSLFELNGASGSGDGGLGGAIYNTNAGVVTLMGSTTFRENAAFMGGAIYTSDGDEENGEPASVTTFPDDTVFEDNSAEHCPDVHNGDSDNCPVV 381          
BLAST of mRNA_H-canaliculatus_F_contig1471.3596.1 vs. uniprot
Match: D8LJ44_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ44_ECTSI)

HSP 1 Score: 470 bits (1210), Expect = 4.190e-163
Identity = 250/376 (66.49%), Postives = 289/376 (76.86%), Query Frame = 0
Query:    7 LALVAALLVAPASSVEYTIETCSDITDVDDTLVTAIIIDASIFTCDEYTRFRVRHAMTLKATGPSLKFSNFSLKVLGELTVEPDVVFTGVTDQIKNGGVLYVSEGASATFMGASSFTDNSVRNKPVGN--------------SYVTKKGGAIHNKGILMFEGEAIFERNEVRTDDSPDQGKGGAISNTGSGSILFKGKLVMEENMADGFFAGLGGAIYTRGNIVLDGESEFSLNAASDGGGIYQTSVGSLAFNGMTTFSENTAYELRGGGLYNGGGVVDFNDGSLFDGNRASGSGDGGFGGGIYNGDGGTVALTGPTTFSSNAAYWGGAIYTDDGDVEDGKAASATTYPDDADFVGNSAEFCPDVNNGDNDSCPEV 368
            L L+A LL APA++VEYT+ TC+D+ DVDDT VT + ID S F CDEYTRF VR++MTLKAT  +++F NFSLKVLGELTVEPDV F GV DQ+KNGGVL V+EGA++TFMG S F+DNSV  K +G               SYV KKGGAIHNKG L FEG+A FERN V T+DS +QGK GAISNTGSG+I FK KL M++N A+GFF GLGGAIY RG I++DGES FSLN ASDGGGIYQT +G + FN M TFSEN+AYELRGGGL N GGVV+ N GSLF+ N ASGSGDGG GG IYNG+ G V L G TTF  NAAY GGAIYTDDG V +G+AAS TT+PDD  F  N A+FCPDV +GDND+CP V
Sbjct:    6 LTLIAGLLAAPAAAVEYTVATCADLADVDDTQVTGLTIDTSTFACDEYTRFPVRNSMTLKATVAAVEFGNFSLKVLGELTVEPDVTFNGVVDQVKNGGVLSVAEGATSTFMGTSEFSDNSVAVKQLGAVSCGDGCERTGRGLSYVVKKGGAIHNKGTLTFEGDATFERNAVHTEDSVEQGKAGAISNTGSGTIWFKSKLTMKDNEAEGFFEGLGGAIYNRGEIIVDGESLFSLNTASDGGGIYQTPIGKMTFNSMATFSENSAYELRGGGLMNYGGVVNINAGSLFELNGASGSGDGGLGGAIYNGNEGAVTLMGSTTFRENAAYEGGAIYTDDGSVANGEAASVTTFPDDTVFEDNRADFCPDVFDGDNDNCPVV 381          
BLAST of mRNA_H-canaliculatus_F_contig1471.3596.1 vs. uniprot
Match: D7FL58_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL58_ECTSI)

HSP 1 Score: 254 bits (648), Expect = 1.040e-79
Identity = 144/266 (54.14%), Postives = 173/266 (65.04%), Query Frame = 0
Query:  117 MGASSFTDNSVRNKPVGN--------------SYVTKKGGAIHNKGILMFEGEAIFERNEVRTDDSPDQGKGGAISNTGSGSILFKGKLVMEENMADGFFAGLGGAIYTRGNIVLDGESEFSLNAASDGGGIYQTSVGSLAFNGMTTFSENTAYELRGGGLYNGGGVVDFNDGSLFDGNRASGSGDGGFGGGIYNGDGGTVALTGPTTFSSNAAYWGGAIYTDDGDVEDGKAASATTYPDDADFVGNSAEFCPDVNNGDNDSCPEV 368
            MG S F++NSV  K  G               +Y+ KKGGAIHNKG L F+G+A FERN   T+ S  +G GGAISNTGSG+ILFK KL M++N AD  FAGLGGAIY RG I+++G S FSLN A+ GGGI+QTS+G++ FNGM TFSEN A E  GGGL N GGVV+ N GSLF+ N AS SGDGGFGG I+N                   +WGGAIYT+D D       S TT+PDD       AE+CPDV+NGD+D+CP V
Sbjct:    1 MGTSEFSNNSVAVKQFGRISCGDGCTRSERGLTYIVKKGGAIHNKGTLTFDGDATFERNVAHTESSNQRGNGGAISNTGSGTILFKSKLTMKDNQADANFAGLGGAIYNRGEIIVEGASLFSLNHAAAGGGIHQTSIGTMTFNGMATFSENFAGEPTGGGLTNNGGVVNINAGSLFEHNWASASGDGGFGGAIFNTKXXXXXXXXXXXXXXXXXHWGGAIYTNDADGP----GSVTTFPDDXXXXXXRAEYCPDVHNGDDDNCPVV 262          
BLAST of mRNA_H-canaliculatus_F_contig1471.3596.1 vs. uniprot
Match: A0A6H5KTD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTD4_9PHAE)

HSP 1 Score: 220 bits (561), Expect = 3.880e-65
Identity = 148/349 (42.41%), Postives = 192/349 (55.01%), Query Frame = 0
Query:   28 CSDITDVDDTLVTAIIIDASIFTCDEYTRFRVRHAMTLKATGPSLKFSNFSLKVLGELTVEPDVVFTGVTDQIKNGGVLYVSEGASATFMGASSFTDNSVRNKPVGNSY---VTKKGGAIHNKGILMFEGEAIFERNEVRTDDSPDQGKGGAISNTGSGSILFKGKLVMEENMADGFFAGL-GGAIYTRGNIVLDGESEFSLNAASDGGGIYQTSVGSLAFNGMTTFSENTAYELRGGGLYNGGGVVDFNDGSLFDGNRASGSGDGGFGGGIYNGDGGTVALTGPTTFSSNAAYWGGAIYTDDGD-----VEDGKAASAT-TYPDDADFVGNSAEFCPD-VNNGDNDSC 365
            C++   +D  + T + I  + F CDEYTR  +R  M LK++   + FSNF+LKV G LTVEPDVVFTGV+   KNGGVL +  GA   F G + F+DNS+ +  +  S    + +KGGAIH KG L FE +A F  N +        G GGAIS    GSI F GKL M +N AD +F G  GGAI+ RG+IV+DGE+EF+ N    GG I+Q    +L FN   TF+ N   +  GG + N GG V  N GSLF    A  SGDGG              LTG TTF  N   WGGA++           ED      T +YP+D  F  N A++C D  ++ D ++C
Sbjct:   29 CTEFAAIDRKVETEVTITEADFACDEYTRLSIRSNMVLKSSVGKVTFSNFALKVYGSLTVEPDVVFTGVSLVEKNGGVLKLELGAVGVFKGTAEFSDNSIISTSIDESTEEEILRKGGAIHTKGSLTFEKDATFSGN-LNDRLYYGSGPGGAISVHVKGSIYFMGKLTMTDNEADDYFGGAQGGAIFNRGDIVVDGEAEFTGNIGGRGGAIFQEKWATLVFNDFVTFTSNKCLDTFGGTIANIGGDVTANAGSLFFDGFAENSGDGGLXXXXXXXXXXXXXLTGSTTFRQNYGNWGGAVFNSAVPNAYFTAEDESYVMPTISYPEDTIFEDNDAQYCNDFASDFDEETC 376          
BLAST of mRNA_H-canaliculatus_F_contig1471.3596.1 vs. uniprot
Match: D7FQG1_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQG1_ECTSI)

HSP 1 Score: 192 bits (489), Expect = 4.640e-57
Identity = 106/177 (59.89%), Postives = 126/177 (71.19%), Query Frame = 0
Query:  193 MEENMADGFFAGLGGAIYTRGNIVLDGESEFSLNAASDGGGIYQTSVGSLAFNGMTTFSENTAYELRGGGLYNGGGVVDFNDGSLFDGNRASGSGDGGFGGGIYNGDGGTVALTGPTTFSSNAAYWGGAIYTDDGDVEDGKAASATTYPDDADFVGNSAE-FCPDVNNGDNDSCPEV 368
            M EN  DG + GLGGAIY RG I ++GES FS N +SDGGGIYQTS+G + FN M TF  N A  LRGGGL N GGVV+ N GSLF+ N A+ + DGG GG I+N +GG V L GPTTF  N A+WGGAIYTDDG       AS TT+PDD  F  NSA+ +CPDV+NGD+++CP V
Sbjct:    1 MNENDTDGQYGGLGGAIYNRGEITVEGESLFSENRSSDGGGIYQTSIGIMTFNSMATFFHNVAENLRGGGLMNDGGVVNINAGSLFEQNFAAANADGGRGGAIHNRNGGVVTLMGPTTFRENGAWWGGAIYTDDG-----YPASVTTFPDDTVFEDNSADAYCPDVHNGDDNNCPVV 172          
BLAST of mRNA_H-canaliculatus_F_contig1471.3596.1 vs. uniprot
Match: D7FQG2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQG2_ECTSI)

HSP 1 Score: 125 bits (315), Expect = 5.040e-32
Identity = 62/97 (63.92%), Postives = 76/97 (78.35%), Query Frame = 0
Query:    7 LALVAALLVAPASSVEYTIETCSDITDVDDTLVTAIIIDASIFTCDEYTRFRVRHAMTLKATGPSLKFSNFSLKVLGELTVEPDVVFTGVTDQIKNG 103
            L  +A+LL  PA++VEY + TC+D+ DVDDT VT + IDA+ F CDEYTRFRVR++MTLKAT  +++F NFSLKVLGELTVEPDV F GV DQ   G
Sbjct:    6 LTFIASLLATPAAAVEYMVTTCADLADVDDTQVTGLTIDANTFACDEYTRFRVRNSMTLKATVSAVEFGNFSLKVLGELTVEPDVTFNGVVDQSSEG 102          
BLAST of mRNA_H-canaliculatus_F_contig1471.3596.1 vs. uniprot
Match: A0A5B9R9B7_9BACT (Putative outer membrane protein PmpB n=1 Tax=Roseimaritima ulvae TaxID=980254 RepID=A0A5B9R9B7_9BACT)

HSP 1 Score: 58.9 bits (141), Expect = 1.160e-5
Identity = 74/267 (27.72%), Postives = 102/267 (38.20%), Query Frame = 0
Query:   90 DVVFTGVTDQIKNGGVLYVSEGASATFMGASSFTDNSVRNKPVGNSYVTKKGGAIHNKGILMFEGEAIFERNEVRTDDSPDQGKGGAISNTGSGSILFKGKLVMEENMADGFFAGLGGAIYTRGNIVLDGESEF-------------------------------------SLNAASDGGGIYQTSVGSLAFNGMTTFSENTAYELRGGGLYNGGGVVDFNDGSLFDGNRASGSG---DGGFGGGIYNGDGGTVALTGPTTFSSNAA 316
            D + TG      NGG L+VS   +    G +           V  +    +GG + N                   D + D G GG I N+  G++     + +  N+ADG   G GG I   G + +D                                          ++ A  +GGG++ T        G T  S NTA  L GGGL+NG G +   DG++ DGN ASG G   DGG  GGI+N  GGTV+L       +N A
Sbjct:  607 DAIGTGAAPG--NGGGLHVSGDGNVDITGGT-----------VDGNTAALEGGGLWNXXXXXXXXXXXXXXXXXSGDAAADDG-GGGIFNSFGGTVNLLNDVAITNNIADGPTYGSGGGILNLGELTVDASDIVITGNQANRAXXXXXXXXXXXXXXXXXXXXXXNAGVAPAVGAPGNGGGLHITGGADSNITGGTV-SGNTA-ALEGGGLWNGTGTMTI-DGTIIDGNTASGDGAADDGG--GGIFNSAGGTVSLLNNVAIINNIA 854          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1471.3596.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FLJ6_ECTSI3.300e-16767.02Asn/thr-rich large protein family protein n=1 Tax=... [more]
D8LJ44_ECTSI4.190e-16366.49Asn/thr-rich large protein family protein n=1 Tax=... [more]
D7FL58_ECTSI1.040e-7954.14Asn/thr-rich large protein family protein n=1 Tax=... [more]
A0A6H5KTD4_9PHAE3.880e-6542.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQG1_ECTSI4.640e-5759.89Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
D7FQG2_ECTSI5.040e-3263.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A5B9R9B7_9BACT1.160e-527.72Putative outer membrane protein PmpB n=1 Tax=Rosei... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003368Polymorphic outer membrane protein repeatPFAMPF02415Chlam_PMPcoord: 121..147
e-value: 0.087
score: 13.3
coord: 309..324
e-value: 0.02
score: 15.3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..368
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.852
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 96..325

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1471contigH-canaliculatus_F_contig1471:4277..10127 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1471.3596.1mRNA_H-canaliculatus_F_contig1471.3596.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1471 4277..10127 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1471.3596.1 ID=prot_H-canaliculatus_F_contig1471.3596.1|Name=mRNA_H-canaliculatus_F_contig1471.3596.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=369bp
MKHGSCLALVAALLVAPASSVEYTIETCSDITDVDDTLVTAIIIDASIFT
CDEYTRFRVRHAMTLKATGPSLKFSNFSLKVLGELTVEPDVVFTGVTDQI
KNGGVLYVSEGASATFMGASSFTDNSVRNKPVGNSYVTKKGGAIHNKGIL
MFEGEAIFERNEVRTDDSPDQGKGGAISNTGSGSILFKGKLVMEENMADG
FFAGLGGAIYTRGNIVLDGESEFSLNAASDGGGIYQTSVGSLAFNGMTTF
SENTAYELRGGGLYNGGGVVDFNDGSLFDGNRASGSGDGGFGGGIYNGDG
GTVALTGPTTFSSNAAYWGGAIYTDDGDVEDGKAASATTYPDDADFVGNS
AEFCPDVNNGDNDSCPEV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011050Pectin_lyase_fold/virulence
IPR003368POMP_repeat