prot_H-canaliculatus_F_contig1434.3397.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1434.3397.1
Unique Nameprot_H-canaliculatus_F_contig1434.3397.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length256
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1434.3397.1 vs. uniprot
Match: D7FTP9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTP9_ECTSI)

HSP 1 Score: 329 bits (844), Expect = 3.110e-111
Identity = 167/256 (65.23%), Postives = 195/256 (76.17%), Query Frame = 0 
Query:    1 MERTRVKNGYGLCTSPLSVSVIGQFDGSSEKRKADTREWDRRYHTDATFQGAQQRENHPVRKILHMQKCYPETVLRLNQKGSMKRNIGSASTARPVSSRWHRNPSPNNKNSAPEGLRQ--------QTARSTNGRQQDLSDDAARGQVAREYLFCRDKMAYNRAKGREAEVDGILTGTSPLEKKMPLFPAKATHQQLLGLVHRPSHPEKPAPSVPRERRWLGSNVGWEGNRGLPTPPAGRNAKDGEVLPWPSSQYP 248
            ME+ RVKNGYG  TS LS SVIG FD SSE+RKA  R W+++Y TDA FQ  Q + NHPVRK+LHMQKCYPETV RLN++G            RP+S RWHRNP+PNN N++    ++        Q  RS +G  + LS +  R +   EY FCRDKMAYNR +GREAEVDGILTGTSPL+K++PLFPAKATHQQLLGLVHRP+HP+KPAP+VPRER+WLG NVGWEGNRG+ TPPAGRNAKDGEV PWPSSQYP
Sbjct:    1 MEQIRVKNGYGFLTSTLSASVIGDFDASSEERKATNRAWNQKYDTDAVFQMRQLQGNHPVRKVLHMQKCYPETVFRLNRQG----RTHEPDADRPISGRWHRNPAPNNYNTSVATQQRHRRPQSSLQADRSADGGHE-LSGNTTRRRGGYEYHFCRDKMAYNRTRGREAEVDGILTGTSPLDKRLPLFPAKATHQQLLGLVHRPTHPDKPAPAVPRERKWLGDNVGWEGNRGMATPPAGRNAKDGEVHPWPSSQYP 251
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1434.3397.1 vs. uniprot
Match: A0A7S2XVD6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVD6_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 8.190e-13
Identity = 35/73 (47.95%), Postives = 45/73 (61.64%), Query Frame = 0 
Query:  178 PLFPAKATHQQLLGLVHR--PSHPEKPAPSVPRERRWLGSNVGWEGNRGLPTPPA-GRNAKDGEVLPWPSSQY 247
            P+FP  A+HQ  L +  +     P K AP   +  RWLG  VGWE NRGLPTPP  G + KDG + PWP+++Y
Sbjct:   25 PIFPQGASHQTQLTIDKKLVGDDPRKSAPPTKQPLRWLGDGVGWENNRGLPTPPGVGADGKDGAIKPWPTTKY 97
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1434.3397.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FTP9_ECTSI3.110e-11165.23Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2XVD6_9STRA8.190e-1347.95Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1434contigH-canaliculatus_F_contig1434:21442..23141 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1434.3397.1mRNA_H-canaliculatus_F_contig1434.3397.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1434 21442..23280 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1434.3397.1 ID=prot_H-canaliculatus_F_contig1434.3397.1|Name=mRNA_H-canaliculatus_F_contig1434.3397.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=256bp
MERTRVKNGYGLCTSPLSVSVIGQFDGSSEKRKADTREWDRRYHTDATFQ
GAQQRENHPVRKILHMQKCYPETVLRLNQKGSMKRNIGSASTARPVSSRW
HRNPSPNNKNSAPEGLRQQTARSTNGRQQDLSDDAARGQVAREYLFCRDK
MAYNRAKGREAEVDGILTGTSPLEKKMPLFPAKATHQQLLGLVHRPSHPE
KPAPSVPRERRWLGSNVGWEGNRGLPTPPAGRNAKDGEVLPWPSSQYPSF
GSDPQ*
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